Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 6.5e-106 387.5 208 100.0
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 3.6e-72 275.4 206 74.3
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 9.1e-68 260.8 205 70.7
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 1.2e-67 260.4 208 71.2
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 5.9e-67 258.1 208 70.7
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.3e-65 252.3 203 70.4
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 3.0e-63 245.7 213 66.7
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 3.0e-63 245.7 203 67.5
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 4.0e-63 245.4 215 65.1
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 7.5e-62 241.1 201 69.7
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 9.8e-62 240.7 211 67.3
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 2.2e-61 239.6 212 66.5
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 4.9e-61 238.4 216 65.7
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 2.4e-60 236.1 213 62.0
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 2.4e-60 236.1 205 66.3
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 3.1e-60 235.7 210 64.3
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 9.2e-60 234.2 215 65.1
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.7e-59 232.6 214 62.1
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 4.5e-59 231.9 202 66.3
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 7.8e-59 231.1 210 62.9
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 2.9e-58 229.2 229 59.0
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 3.8e-58 228.8 206 66.0
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 3.8e-58 228.8 210 62.9
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 5.0e-58 228.4 209 64.1
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 6.6e-58 228.0 213 62.0
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 8.6e-58 227.6 206 66.0
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 8.6e-58 227.6 209 61.2
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.1e-57 227.3 206 65.0
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.5e-57 226.9 206 65.0
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.5e-57 226.9 213 62.9
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 1.9e-57 226.5 212 62.7
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.5e-57 226.1 206 65.0
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 3.3e-57 225.7 215 60.9
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.3e-57 225.7 220 61.8
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 4.3e-57 225.3 205 65.9
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 4.3e-57 225.3 227 59.0
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 4.3e-57 225.3 218 58.7
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 9.5e-57 224.2 213 62.9
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.2e-56 223.8 206 64.6
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 1.2e-56 223.8 203 65.0
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 2.8e-56 222.6 214 61.2
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 3.6e-56 222.2 216 60.6
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 3.6e-56 222.2 210 61.9
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 6.1e-56 221.5 211 64.0
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 1.8e-55 219.9 203 66.0
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 5.2e-55 218.4 205 62.9
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 6.8e-55 218.0 207 62.3
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 8.9e-55 217.6 215 60.5
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.6e-54 216.1 213 60.6
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 3.4e-54 215.7 201 62.7
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 7.5e-54 214.5 212 61.3
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 9.8e-54 214.2 172 68.0
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.8e-54 214.2 227 59.0
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.3e-53 213.8 217 59.0
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 1.7e-53 213.4 205 62.0
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 2.2e-53 213.0 213 61.0
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 2.9e-53 212.6 173 67.1
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 1.1e-52 210.7 173 66.5
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.1e-52 210.7 173 66.5
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 1.1e-52 210.7 217 57.6
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 1.9e-52 209.9 207 60.4
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 4.1e-52 208.8 203 64.5
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 5.4e-52 208.4 213 58.7
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 7.0e-52 208.0 197 62.9
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 7.0e-52 208.0 199 60.3
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 7.0e-52 208.0 204 59.3
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 1.6e-51 206.8 202 60.9
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 2.0e-51 206.5 199 60.3
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 6.0e-51 204.9 210 57.1
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 1.0e-50 204.1 210 58.1
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 1.0e-50 204.1 205 60.5
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 3.9e-50 202.2 214 57.5
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 5.0e-50 201.8 206 57.3
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 1.1e-49 200.7 201 60.7
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 1.9e-49 199.9 217 57.1
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 7.3e-49 198.0 224 56.2
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 2.1e-48 196.4 209 56.5
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 2.8e-48 196.1 218 56.4
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 2.8e-48 196.1 218 56.9
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 4.7e-48 195.3 229 55.0
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 3.4e-46 189.1 216 55.6
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 4.4e-46 188.7 195 56.9
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.4e-44 183.7 211 55.0
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.4e-44 183.0 118 79.7
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.6e-43 180.3 128 75.8
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 2.1e-43 179.9 198 56.6
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 2.1e-43 179.9 198 56.6
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 6.0e-43 178.3 198 56.1
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 1.0e-42 177.6 202 55.0
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 1.3e-42 177.2 206 55.8
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 1.3e-42 177.2 206 55.8
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 5.1e-42 175.3 198 55.6
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 5.1e-42 175.3 198 55.6
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 1.5e-41 173.7 188 55.3
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.9e-41 173.3 170 58.2
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 3.3e-41 172.6 119 75.6
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 2.3e-39 166.4 208 51.9
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 4.0e-39 165.6 117 73.5
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 2.0e-38 163.3 121 71.9
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.0e-34 151.0 203 47.3
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 6.8e-31 138.3 92 78.3
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 7.6e-30 134.8 80 83.8
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 1.4e-28 130.6 203 44.8
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.7e-27 126.3 201 44.3
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.5e-27 125.9 163 50.3
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 3.5e-27 125.9 82 76.8
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.6e-27 125.6 147 51.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.7e-26 123.6 202 43.6
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 6.6e-26 121.7 205 40.5
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 8.7e-26 121.3 196 43.4
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-17 94.4 166 39.8
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 1.1e-17 94.4 135 44.4
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 1.9e-17 93.6 213 37.6
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.8e-16 89.7 152 44.7
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 5.4e-12 75.5 77 54.5
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 9.3e-12 74.7 45 80.0
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.6e-11 73.9 44 77.3
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.1e-11 73.6 46 78.3
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 4.6e-11 72.4 128 41.4
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 1.0e-10 71.2 143 37.8
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 4.8e-08 62.4 177 33.3
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.8e-08 62.4 109 44.0
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 6.2e-08 62.0 46 63.0


User provided reference genes

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