Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.3e-183 645.2 396 100.0
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.4e-45 186.0 368 41.8
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 5.6e-42 176.0 369 38.8
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 1.4e-40 171.4 362 41.7
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 4.5e-39 166.4 361 34.3
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 2.9e-38 163.7 374 34.8
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 8.4e-38 162.2 371 41.5
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.2e-36 158.3 364 43.4
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 7.9e-36 155.6 370 41.9
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 1.3e-35 154.8 353 34.3
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.1e-34 151.8 373 38.1
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 3.3e-34 150.2 386 34.5
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 9.6e-34 148.7 370 43.0
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 3.7e-33 146.7 376 40.4
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.1e-32 145.2 368 35.6
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 3.1e-32 143.7 351 37.0
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 4.0e-32 143.3 383 39.9
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 5.3e-32 142.9 378 41.0
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 6.9e-32 142.5 361 42.9
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 9.0e-32 142.1 379 40.6
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.5e-31 141.4 351 36.8
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 2.0e-31 141.0 360 39.4
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.0e-31 141.0 355 41.4
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 2.0e-31 141.0 373 38.6
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.0e-31 141.0 358 38.5
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.4e-31 140.2 369 40.9
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 4.5e-31 139.8 367 39.5
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 7.6e-31 139.0 139 52.5
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.3e-30 138.3 378 39.2
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 1.7e-30 137.9 346 42.8
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 2.2e-30 137.5 369 40.4
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.9e-30 137.1 362 42.0
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.8e-30 136.7 377 31.3
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 6.5e-30 136.0 353 38.2
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 8.4e-30 135.6 352 36.9
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 8.4e-30 135.6 195 42.1
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.4e-29 134.8 143 52.4
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.9e-29 134.4 378 34.9
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 3.2e-29 133.7 382 34.6
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 3.2e-29 133.7 390 32.1
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 4.2e-29 133.3 235 36.6
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.2e-29 133.3 363 30.0
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 5.5e-29 132.9 361 41.0
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 9.3e-29 132.1 237 35.9
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.6e-28 131.3 384 35.2
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.1e-28 131.0 374 32.1
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 2.1e-28 131.0 131 52.7
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.1e-28 131.0 349 31.5
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 2.1e-28 131.0 116 54.3
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 2.7e-28 130.6 355 33.5
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 4.6e-28 129.8 375 35.7
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 4.6e-28 129.8 369 37.1
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 6.1e-28 129.4 133 51.1
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 7.9e-28 129.0 358 36.9
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.8e-27 127.9 385 34.3
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 2.3e-27 127.5 354 31.6
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 6.7e-27 125.9 365 41.6
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.1e-26 125.2 367 41.4
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.9e-26 124.4 377 39.8
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.5e-26 124.0 363 33.6
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 4.3e-26 123.2 352 39.5
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 5.7e-26 122.9 109 54.1
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 5.7e-26 122.9 368 32.9
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 7.4e-26 122.5 245 35.5
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 9.7e-26 122.1 109 54.1
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 6.3e-25 119.4 368 29.1
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 6.3e-25 119.4 364 34.3
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.1e-24 118.6 355 36.1
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 3.1e-24 117.1 379 28.8
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 4.1e-24 116.7 357 37.0
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 6.9e-24 115.9 110 51.8
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 9.0e-24 115.5 363 33.3
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.2e-23 115.2 324 32.4
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 2.6e-23 114.0 143 44.8
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 3.4e-23 113.6 394 38.3
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 7.7e-23 112.5 143 46.9
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 7.7e-23 112.5 359 28.4
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 7.7e-23 112.5 357 30.3
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.7e-22 111.3 358 38.8
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.7e-22 111.3 355 33.2
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 2.2e-22 110.9 356 35.7
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 5.0e-22 109.8 111 51.4
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.1e-21 108.6 108 49.1
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.1e-21 108.6 107 49.5
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.1e-21 108.6 374 30.5
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.4e-21 108.2 100 53.0
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 2.5e-21 107.5 359 35.9
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 2.5e-21 107.5 318 29.6
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 5.5e-21 106.3 93 55.9
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 7.2e-21 105.9 374 29.7
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.2e-20 105.1 387 27.1
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 1.6e-20 104.8 356 35.7
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 1.6e-20 104.8 356 35.7
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 1.6e-20 104.8 93 53.8
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.6e-20 104.8 112 45.5
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 2.7e-20 104.0 95 52.6
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.6e-20 103.6 144 43.1
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 6.1e-20 102.8 110 50.0
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.4e-19 101.7 354 34.2
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 5.1e-19 99.8 359 27.6
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 6.7e-19 99.4 380 30.0
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 6.7e-19 99.4 368 27.7
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.5e-18 98.2 354 34.5
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.0e-18 97.8 358 34.6
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.5e-18 97.4 94 50.0
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 3.3e-18 97.1 357 28.6
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 3.3e-18 97.1 373 27.1
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 4.3e-18 96.7 355 34.9
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 3.1e-16 90.5 99 47.5
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.3e-14 85.1 341 34.0
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 5.5e-13 79.7 122 41.0
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.1e-12 77.8 79 53.2
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 3.6e-12 77.0 368 35.9
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 2.3e-11 74.3 315 36.5
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 3.3e-10 70.5 143 35.7
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.8e-09 67.4 368 35.1
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.1e-08 65.5 97 42.3
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 1.8e-08 64.7 44 63.6
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 4.1e-08 63.5 50 54.0
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 5.9e-07 59.7 111 36.0
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 1.7e-06 58.2 100 33.0
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 6.5e-06 56.2 71 42.3
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 8.5e-06 55.8 53 49.1


User provided reference genes

Program Settings