Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 4.3e-237 824.3 427 100.0
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 8.0e-143 511.1 427 66.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.2e-137 493.0 428 62.1
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 1.9e-136 490.0 429 61.8
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 1.6e-135 486.9 432 60.9
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 5.2e-134 481.9 431 61.0
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 2.0e-133 479.9 440 59.5
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 7.0e-131 471.5 419 59.9
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 4.7e-127 458.8 369 61.8
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 3.4e-125 452.6 430 58.6
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 3.4e-125 452.6 435 56.3
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 1.3e-124 450.7 435 57.2
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 3.7e-124 449.1 404 58.4
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 4.9e-124 448.7 430 58.6
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 6.3e-124 448.4 434 54.6
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 6.3e-124 448.4 434 54.6
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.1e-123 447.6 391 59.3
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.4e-123 447.2 402 59.0
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 1.8e-123 446.8 437 55.6
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 9.2e-123 444.5 434 55.8
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.3e-121 440.7 408 57.6
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 1.7e-121 440.3 399 57.6
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 1.7e-121 440.3 402 58.5
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 5.6e-120 435.3 439 55.6
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 1.2e-119 434.1 434 53.9
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 2.8e-119 433.0 426 55.6
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 3.6e-119 432.6 419 54.4
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 1.4e-118 430.6 435 53.1
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 2.3e-118 429.9 407 55.5
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 6.8e-118 428.3 438 54.6
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 1.2e-117 427.6 369 59.9
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 2.2e-116 423.3 401 55.9
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.9e-115 420.2 429 52.9
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 5.4e-115 418.7 381 56.4
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 5.4e-115 418.7 417 53.7
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 9.2e-115 417.9 426 52.6
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 1.2e-114 417.5 407 53.3
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 1.3e-113 414.1 422 51.9
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.7e-113 413.7 406 52.0
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 8.6e-113 411.4 414 52.2
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 8.6e-113 411.4 401 53.1
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 5.6e-112 408.7 419 53.5
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 2.1e-111 406.8 422 51.7
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 3.6e-111 406.0 416 51.7
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 4.7e-111 405.6 405 52.3
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 2.3e-110 403.3 396 53.3
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 3.1e-110 402.9 428 51.4
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 1.2e-109 401.0 411 52.1
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 1.2e-109 401.0 417 51.8
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.5e-109 400.6 412 52.4
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 2.6e-109 399.8 428 50.7
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 7.5e-109 398.3 398 53.0
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 9.8e-109 397.9 396 52.8
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 9.8e-109 397.9 368 55.2
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.7e-108 397.1 396 52.8
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.7e-108 397.1 396 53.3
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 2.9e-108 396.4 396 53.3
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.9e-108 396.4 428 49.1
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 6.4e-108 395.2 396 53.0
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 8.3e-108 394.8 396 52.5
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 8.3e-108 394.8 416 51.2
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.9e-107 393.7 407 51.8
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 4.1e-107 392.5 391 52.7
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 5.4e-107 392.1 396 52.3
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.2e-106 391.0 426 50.0
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.6e-106 390.6 426 49.3
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.1e-106 390.2 420 50.5
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 1.3e-105 387.5 450 47.8
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 1.8e-102 377.1 406 51.0
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 1.2e-101 374.4 430 48.1
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.5e-101 374.0 412 50.5
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.7e-100 370.5 426 47.9
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 2.2e-100 370.2 385 50.9
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 1.9e-99 367.1 426 47.9
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 4.1e-99 365.9 396 51.3
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 2.1e-98 363.6 456 45.8
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 6.0e-98 362.1 401 49.4
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.1e-97 359.0 405 48.4
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 6.6e-97 358.6 431 46.9
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 6.6e-97 358.6 426 47.2
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 8.6e-97 358.2 347 54.8
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.9e-96 357.1 366 52.5
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 4.7e-95 352.4 363 51.2
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 2.4e-94 350.1 324 56.8
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 3.1e-94 349.7 433 44.6
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 1.9e-88 330.5 298 55.0
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 2.6e-85 320.1 347 53.9
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.7e-81 307.4 393 44.5
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 8.1e-79 298.5 309 55.0
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 3.1e-78 296.6 443 38.4
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 6.9e-78 295.4 417 42.9
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 3.4e-77 293.1 318 53.1
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.9e-75 287.3 424 41.5
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 1.1e-72 278.1 395 43.8
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 5.3e-70 269.2 413 37.0
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 2.0e-69 267.3 299 52.2
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 3.5e-66 256.5 242 54.1
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 9.0e-62 241.9 422 35.5
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 3.0e-57 226.9 196 55.6
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 8.7e-57 225.3 200 54.0
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 1.9e-43 181.0 235 45.5
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 1.2e-29 135.2 196 40.8
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 2.1e-26 124.4 86 65.1
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.2e-20 104.4 109 47.7
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 4.2e-19 100.1 233 30.9
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 7.5e-16 89.4 62 58.1
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.3e-15 88.6 56 62.5
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.1e-14 84.0 62 58.1
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.6e-10 71.6 83 54.2
RcHm_v2.0_Chr7g0204861 Rosa chinensis HOM05D001726 ORTHO05D001761 1.5e-08 65.1 168 25.0
RcHm_v2.0_Chr7g0204891 Rosa chinensis HOM05D001726 ORTHO05D001761 2.9e-07 60.8 168 23.8
RcHm_v2.0_Chr7g0204871 Rosa chinensis HOM05D001726 ORTHO05D001761 8.3e-07 59.3 167 25.1
ECA233G4477 Erigeron canadensis HOM05D001726 ORTHO05D001761 1.1e-06 58.9 148 22.3
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 1.1e-06 58.9 120 38.3
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.4e-06 57.8 32 75.0
Os09g0267600 Oryza sativa ssp. japonica HOM05D001726 ORTHO05D001761 2.4e-06 57.8 167 25.7
Zm00001eb358220 Zea mays HOM05D001726 ORTHO05D001761 2.4e-06 57.8 167 25.7
Zm00001eb061610 Zea mays HOM05D001726 ORTHO05D001761 3.2e-06 57.4 167 24.0
Lsat_1_v5_gn_6_7580 Lactuca sativa HOM05D001726 ORTHO05D001761 7.0e-06 56.2 151 23.8
Sc18g0001810 Simmondsia chinensis HOM05D001726 ORTHO05D001761 7.0e-06 56.2 161 26.7
SGA_v2.0_scaffold81G26073 Striga asiatica HOM05D006834 ORTHO05D008623 7.0e-06 56.2 77 40.3
Zm00001eb162120 Zea mays HOM05D001726 ORTHO05D001761 7.0e-06 56.2 167 25.7
Peaxi162Scf00354g00067 Petunia axillaris HOM05D001726 ORTHO05D001761 9.2e-06 55.8 149 24.2


User provided reference genes

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