Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 0.0e+00 1256.9 642 100.0
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 2.0e-294 1015.4 647 81.9
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.1e-204 717.2 648 59.9
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 3.1e-183 646.0 658 56.1
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.7e-181 640.2 648 55.7
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 5.5e-172 608.6 652 53.8
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 2.2e-165 586.6 648 52.0
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.1e-164 584.3 653 53.0
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 1.1e-164 584.3 649 52.1
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 1.9e-164 583.6 650 52.0
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 3.0e-162 576.2 646 51.5
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 2.0e-161 573.5 644 52.2
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 1.3e-160 570.9 652 51.4
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 1.3e-160 570.9 655 51.3
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 2.8e-160 569.7 649 52.4
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 1.4e-159 567.4 655 52.8
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 1.8e-159 567.0 654 51.2
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 4.5e-158 562.4 671 51.0
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 3.2e-156 556.2 644 49.5
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.2e-153 547.7 646 50.9
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 3.4e-153 546.2 642 48.4
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 6.3e-152 542.0 657 49.5
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 2.0e-150 537.0 651 49.8
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 3.5e-150 536.2 396 68.4
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 2.5e-148 530.0 659 47.5
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 4.3e-148 529.3 649 48.8
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 1.6e-147 527.3 648 48.5
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 2.8e-147 526.6 647 48.1
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 4.0e-146 522.7 712 47.2
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.5e-145 520.8 645 49.3
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 3.4e-145 519.6 650 47.4
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 4.4e-145 519.2 642 47.7
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 7.5e-145 518.5 645 49.0
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 2.4e-143 513.5 652 46.3
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 5.4e-143 512.3 656 47.9
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 1.6e-142 510.8 651 46.2
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 4.6e-142 509.2 623 48.0
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 4.6e-142 509.2 651 47.5
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 1.0e-141 508.1 649 46.8
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 5.0e-141 505.8 662 45.9
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 8.6e-141 505.0 701 45.2
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 8.6e-141 505.0 646 47.4
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 1.1e-140 504.6 646 48.8
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 1.5e-140 504.2 646 46.9
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 1.9e-140 503.8 621 47.5
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 3.3e-140 503.1 677 45.5
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 3.3e-140 503.1 660 47.0
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 5.6e-140 502.3 647 47.0
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 5.6e-140 502.3 646 46.1
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 9.5e-140 501.5 679 46.4
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 4.7e-139 499.2 515 56.7
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 1.4e-138 497.7 650 45.8
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 2.3e-138 496.9 657 46.1
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 4.0e-138 496.1 645 47.4
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 5.2e-138 495.7 654 46.2
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 6.8e-138 495.4 644 47.0
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 8.9e-138 495.0 648 45.8
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 4.4e-137 492.7 648 46.9
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 5.8e-137 492.3 645 47.1
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 9.8e-137 491.5 650 46.2
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 1.3e-136 491.1 643 45.9
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.3e-136 491.1 645 47.0
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 2.2e-136 490.3 655 45.3
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 3.7e-136 489.6 661 45.1
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 1.4e-135 487.6 650 45.1
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.7e-133 480.7 646 45.4
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 3.0e-133 479.9 622 45.5
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 6.6e-133 478.8 659 45.7
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 8.6e-133 478.4 649 44.5
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 1.1e-132 478.0 659 46.6
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 1.1e-132 478.0 649 45.0
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 5.6e-132 475.7 284 90.5
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 5.6e-132 475.7 650 44.9
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 5.6e-132 475.7 651 47.3
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 5.6e-132 475.7 620 45.8
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 2.1e-131 473.8 656 45.0
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 8.9e-130 468.4 646 44.7
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.2e-129 468.0 648 44.8
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 1.2e-129 468.0 641 44.0
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 7.5e-129 465.3 654 45.6
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 2.9e-128 463.4 653 45.6
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 2.9e-128 463.4 659 44.9
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 6.4e-128 462.2 649 44.4
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 6.4e-128 462.2 647 45.3
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 3.2e-127 459.9 677 43.0
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.1e-126 457.2 677 42.5
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 2.7e-126 456.8 646 44.9
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 1.0e-125 454.9 650 44.0
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 7.3e-124 448.7 655 46.0
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.2e-123 448.0 648 43.7
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.1e-122 444.9 648 43.5
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 3.1e-122 443.4 624 44.6
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 3.1e-122 443.4 650 43.7
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 1.2e-121 441.4 618 44.3
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.8e-121 439.1 655 44.1
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 5.8e-121 439.1 653 44.7
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 7.6e-121 438.7 621 44.4
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 2.2e-120 437.2 650 42.6
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 1.1e-119 434.9 630 43.5
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 3.2e-119 433.3 630 43.3
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 4.6e-118 429.5 650 42.3
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 1.1e-116 424.9 647 42.0
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 1.1e-116 424.9 647 43.3
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 4.3e-116 422.9 662 43.7
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 4.3e-116 422.9 513 48.7
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 7.3e-116 422.2 641 41.5
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 9.6e-116 421.8 645 42.0
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 9.6e-116 421.8 648 44.0
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 4.7e-115 419.5 648 42.9
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 1.5e-113 414.5 622 43.1
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 2.6e-113 413.7 671 40.5
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 1.7e-112 411.0 620 42.3
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 2.2e-112 410.6 646 41.5
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 1.1e-111 408.3 649 41.9
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 3.2e-111 406.8 630 41.7
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 4.2e-111 406.4 577 44.4
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 9.3e-111 405.2 641 40.7
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 9.3e-111 405.2 641 41.0
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 1.3e-109 401.4 421 54.4
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 5.1e-109 399.4 641 40.4
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 8.7e-109 398.7 648 40.6
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 2.5e-108 397.1 347 60.2
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 4.3e-108 396.4 648 40.4
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 4.5e-105 386.3 648 40.4
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 7.6e-105 385.6 648 40.3
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 4.0e-98 363.2 621 41.5
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 2.7e-94 350.5 565 40.4
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 9.6e-92 342.0 326 56.1
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 4.9e-88 329.7 572 39.7
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 5.5e-87 326.2 568 40.1
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 2.0e-81 307.8 382 48.2
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 7.6e-81 305.8 390 49.0
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 2.2e-80 304.3 266 58.6
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.5e-79 299.7 512 41.4
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 7.9e-78 295.8 395 47.1
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.2e-70 271.9 680 31.5
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.1e-66 258.8 561 32.4
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 2.4e-66 257.7 625 33.9
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 2.7e-62 244.2 406 41.6
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 2.0e-60 238.0 207 59.9
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 3.3e-60 237.3 392 36.5
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 4.8e-59 233.4 258 51.2
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 2.4e-58 231.1 244 50.4
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 2.6e-57 227.6 630 31.0
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 1.1e-55 222.2 239 51.0
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 2.7e-54 217.6 602 33.1
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 6.1e-46 189.9 342 38.9
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.2e-44 185.7 423 35.9
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 7.2e-39 166.4 236 44.1
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 2.2e-35 154.8 264 42.8
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 7.0e-34 149.8 222 44.1
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 5.0e-32 143.7 145 50.3
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 4.3e-31 140.6 207 46.4
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 9.5e-31 139.4 264 40.5
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 3.6e-30 137.5 309 34.6
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.0e-29 134.0 96 69.8
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 4.4e-28 130.6 366 30.3
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 4.6e-25 120.6 273 35.5
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 5.0e-24 117.1 273 35.5
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 8.6e-24 116.3 233 35.6
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 2.2e-19 101.7 89 59.6
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 4.1e-18 97.4 97 50.5
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 9.2e-18 96.3 257 34.2
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.7e-16 92.0 270 33.3
arahy.Tifrunner.gnm1.ann1.Z2YKN3 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.9e-15 88.6 181 37.0
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.9e-15 88.6 84 47.6
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 1.2e-14 85.9 296 28.7
arahy.Tifrunner.gnm1.ann1.U7JCXR Arachis hypogaea HOM05D003892 ORTHO05D004522 1.4e-13 82.4 189 35.4
Aqoxy1G02527 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 8.3e-11 73.2 41 87.8
Ah.02g116070 Amaranthus hybridus HOM05D003892 ORTHO05D004522 3.2e-10 71.2 87 48.3
GSVIVG01022517001 Vitis vinifera HOM05D003892 ORTHO05D004522 7.1e-10 70.1 67 53.7
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 1.7e-08 65.5 200 29.5
CSS0023890 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 9.5e-07 59.7 84 42.9


User provided reference genes

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