Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 6.1e-46 187.2 98 100.0
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 9.1e-26 120.2 96 65.6
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 3.5e-25 118.2 98 67.3
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 2.2e-24 115.5 97 64.9
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 3.8e-24 114.8 99 68.7
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 5.5e-23 110.9 98 60.2
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 7.2e-23 110.5 98 65.3
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 1.6e-22 109.4 103 59.2
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 4.7e-22 107.8 100 61.0
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 8.8e-21 103.6 98 59.2
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.5e-20 102.8 98 59.2
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 2.6e-20 102.1 98 55.1
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 2.6e-20 102.1 98 55.1
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 1.7e-19 99.4 97 56.7
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 3.7e-19 98.2 99 57.6
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 3.7e-19 98.2 104 53.8
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 1.2e-17 93.2 86 61.6
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 1.6e-17 92.8 89 56.2
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 2.0e-17 92.4 99 54.5
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 2.0e-17 92.4 97 53.6
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 7.7e-17 90.5 97 53.6
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 1.0e-16 90.1 99 52.5
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 5.0e-16 87.8 72 63.9
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 8.5e-16 87.0 99 51.5
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.1e-15 86.7 104 51.9
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 1.5e-15 86.3 105 53.3
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 1.5e-15 86.3 96 53.1
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 1.9e-15 85.9 96 51.0
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.9e-15 85.9 98 51.0
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 7.2e-15 84.0 93 50.5
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 7.2e-15 84.0 104 51.0
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 9.4e-15 83.6 99 51.5
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 2.1e-14 82.4 91 53.8
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 2.1e-14 82.4 98 48.0
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 2.7e-14 82.0 100 50.0
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 2.7e-14 82.0 97 50.5
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 3.6e-14 81.6 98 50.0
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 3.6e-14 81.6 106 49.1
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 8.0e-14 80.5 95 51.6
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 1.4e-13 79.7 95 48.4
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 1.4e-13 79.7 95 52.6
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 1.4e-13 79.7 93 48.4
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.8e-13 79.3 95 49.5
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 3.0e-13 78.6 103 55.3
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 3.0e-13 78.6 103 55.3
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 5.2e-13 77.8 99 48.5
TPR.G27329 Trifolium pratense HOM05D007574 ORTHO05D007552 8.8e-13 77.0 100 52.0
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 1.2e-12 76.6 98 46.9
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 1.2e-12 76.6 84 50.0
MBI14_g13884_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 1.5e-12 76.3 75 62.7
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 2.0e-12 75.9 99 48.5
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.0e-12 75.9 103 54.4
Manes.02G127800 Manihot esculenta HOM05D007574 ORTHO05D007552 2.6e-12 75.5 97 50.5
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 2.6e-12 75.5 95 53.7
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 3.4e-12 75.1 100 50.0
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 4.4e-12 74.7 91 47.3
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 9.8e-12 73.6 92 50.0
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 1.3e-11 73.2 101 48.5
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 1.7e-11 72.8 101 50.5
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 3.7e-11 71.6 97 48.5
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 6.3e-11 70.9 67 58.2
Lalb_Chr01g0022701 Lupinus albus HOM05D007574 ORTHO05D007552 1.4e-10 69.7 98 44.9
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 1.8e-10 69.3 96 43.8
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.8e-10 69.3 92 47.8
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 1.8e-10 69.3 47 63.8
Thecc.09G313900 Theobroma cacao HOM05D007574 ORTHO05D007552 2.4e-10 68.9 80 53.8
COL.COLO4_18585 Corchorus olitorius HOM05D007574 ORTHO05D007552 4.1e-10 68.2 95 45.3
Glyma.07G136800 Glycine max HOM05D007574 ORTHO05D007552 7.0e-10 67.4 98 45.9
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 7.0e-10 67.4 88 48.9
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 9.1e-10 67.0 70 55.7
Migut.L01966 Erythranthe guttata HOM05D007574 ORTHO05D007552 9.1e-10 67.0 79 49.4
Lj1g0014408 Lotus japonicus HOM05D007574 ORTHO05D007552 9.1e-10 67.0 99 43.4
Nitab4.5_0004598g0040 Nicotiana tabacum HOM05D007574 ORTHO05D007552 1.6e-09 66.2 81 49.4
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 2.0e-09 65.9 98 43.9
Sed0004598 Sechium edule HOM05D007574 ORTHO05D007552 4.5e-09 64.7 99 46.5
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 5.9e-09 64.3 97 46.4
AUR62027719 Chenopodium quinoa HOM05D007574 ORTHO05D007552 1.3e-08 63.2 96 49.0
BolC4t28121H Brassica oleracea HOM05D009505 ORTHO05D007552 2.9e-08 62.0 89 42.7
Solyc10g086630.2 Solanum lycopersicum HOM05D007574 ORTHO05D007552 5.0e-08 61.2 89 43.8
BcaC02g07493 Brassica carinata HOM05D009505 ORTHO05D007552 6.5e-08 60.8 89 41.6
C04p66190 Brassica napus HOM05D009505 ORTHO05D007552 6.5e-08 60.8 89 41.6
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 6.5e-08 60.8 76 50.0
Sopen10g036030 Solanum pennellii HOM05D007574 ORTHO05D007552 6.5e-08 60.8 98 42.9
AUR62043962 Chenopodium quinoa HOM05D007574 ORTHO05D007552 8.5e-08 60.5 95 47.4
Prupe.6G068600 Prunus persica HOM05D007574 ORTHO05D007552 1.1e-07 60.1 87 42.5
PGSC0003DMG400008893 Solanum tuberosum HOM05D007574 ORTHO05D007552 1.1e-07 60.1 102 42.2
Solyc09g011190.1 Solanum lycopersicum HOM05D007574 ORTHO05D007552 1.5e-07 59.7 102 42.2
Lj1g0012526 Lotus japonicus HOM05D007574 ORTHO05D007552 1.9e-07 59.3 99 40.4
Sp4g20120 Schrenkiella parvula HOM05D009505 ORTHO05D007552 1.9e-07 59.3 92 43.5
PSO675G0145 Papaver somniferum HOM05D007574 ORTHO05D007552 2.5e-07 58.9 92 45.7
SalBow5G2190 Salvia bowleyana HOM05D007574 ORTHO05D007552 2.5e-07 58.9 47 63.8
Sopen09g005930 Solanum pennellii HOM05D007574 ORTHO05D007552 2.5e-07 58.9 102 42.2
Sc01g0004620 Simmondsia chinensis HOM05D007574 ORTHO05D007552 4.2e-07 58.2 75 48.0
Ciclev10027461m.g Citrus clementina HOM05D007574 ORTHO05D007552 5.5e-07 57.8 100 42.0
BcaB06g29026 Brassica carinata HOM05D009505 ORTHO05D007552 7.2e-07 57.4 89 40.4
AT2G37750 Arabidopsis thaliana HOM05D009505 ORTHO05D007552 1.6e-06 56.2 89 43.8
BcaB01g03759 Brassica carinata HOM05D009505 ORTHO05D007552 3.6e-06 55.1 89 40.4
Os01g0143900 Oryza sativa ssp. japonica HOM05D007574 ORTHO05D007552 4.7e-06 54.7 62 50.0
BcaB02g09253 Brassica carinata HOM05D009505 ORTHO05D007552 8.0e-06 53.9 89 40.4
BcaB02g09254 Brassica carinata HOM05D009505 ORTHO05D007552 8.0e-06 53.9 89 40.4


User provided reference genes

Program Settings