Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 3.6e-68 261.5 138 100.0
Aqoxy7G00306 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 2.0e-39 166.0 139 72.7
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 2.9e-30 135.6 130 57.7
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.9e-30 135.6 135 57.0
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.1e-28 127.9 129 55.8
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 6.8e-27 124.4 134 53.7
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.2e-26 123.6 123 56.9
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 3.4e-26 122.1 135 58.5
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 4.4e-26 121.7 137 53.3
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.7e-25 119.8 124 55.6
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.2e-25 119.4 136 53.7
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.2e-25 119.4 136 53.7
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 2.9e-25 119.0 139 52.5
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 3.7e-25 118.6 125 55.2
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 4.9e-25 118.2 136 52.9
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 6.3e-25 117.9 127 54.3
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 8.3e-25 117.5 140 51.4
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.1e-24 117.1 136 52.9
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 3.2e-24 115.5 130 50.8
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 5.4e-24 114.8 137 51.8
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 7.0e-24 114.4 139 51.1
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 2.0e-23 112.8 124 52.4
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 3.5e-23 112.1 127 50.4
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 7.8e-23 110.9 120 51.7
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.0e-22 110.5 113 54.9
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 1.3e-22 110.2 118 50.8
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.7e-22 109.8 129 51.2
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 2.9e-22 109.0 129 53.5
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 2.9e-22 109.0 125 49.6
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 5.0e-22 108.2 105 57.1
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 6.6e-22 107.8 127 49.6
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 6.6e-22 107.8 129 48.8
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 8.6e-22 107.5 130 50.8
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 8.6e-22 107.5 134 51.5
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 1.1e-21 107.1 125 53.6
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.5e-21 106.7 139 47.5
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.5e-21 106.7 117 53.0
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 2.5e-21 105.9 139 47.5
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 5.6e-21 104.8 136 44.1
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 7.3e-21 104.4 128 48.4
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 7.3e-21 104.4 127 50.4
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 7.3e-21 104.4 140 43.6
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 9.5e-21 104.0 104 52.9
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 1.6e-20 103.2 138 47.8
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 1.6e-20 103.2 136 47.8
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 2.1e-20 102.8 138 47.8
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 2.8e-20 102.4 132 47.7
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 2.8e-20 102.4 129 48.8
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 3.6e-20 102.1 126 51.6
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 3.6e-20 102.1 140 45.7
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 6.1e-20 101.3 135 47.4
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 6.1e-20 101.3 116 51.7
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 8.0e-20 100.9 130 48.5
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 1.0e-19 100.5 129 47.3
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.8e-19 99.8 127 44.9
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 3.1e-19 99.0 136 46.3
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 4.0e-19 98.6 126 46.8
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.8e-19 97.8 123 46.3
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.2e-18 97.1 126 50.8
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 2.0e-18 96.3 133 48.9
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 2.0e-18 96.3 141 43.3
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 2.6e-18 95.9 126 46.0
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 2.6e-18 95.9 125 47.2
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 3.4e-18 95.5 139 42.4
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 7.5e-18 94.4 129 50.4
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.7e-17 93.2 137 40.9
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 2.2e-17 92.8 133 47.4
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 2.2e-17 92.8 106 50.0
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 2.2e-17 92.8 137 40.1
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 4.9e-17 91.7 131 44.3
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 1.4e-16 90.1 125 43.2
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 1.9e-16 89.7 124 43.5
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 2.4e-16 89.4 136 44.1
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 2.4e-16 89.4 82 57.3
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 3.2e-16 89.0 106 51.9
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 4.1e-16 88.6 133 42.1
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 5.4e-16 88.2 134 44.8
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 9.2e-16 87.4 97 52.6
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 2.0e-15 86.3 107 44.9
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 2.7e-15 85.9 115 47.8
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 2.7e-15 85.9 146 41.8
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 6.0e-15 84.7 131 42.0
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.0e-14 84.0 129 42.6
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 1.0e-14 84.0 135 44.4
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.7e-14 83.2 133 45.9
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 5.0e-14 81.6 106 49.1
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 8.6e-14 80.9 86 47.7
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 8.6e-14 80.9 86 47.7
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 1.1e-13 80.5 140 39.3
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.1e-13 80.5 135 40.0
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.5e-13 80.1 105 41.0
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.5e-13 80.1 122 42.6
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.9e-13 79.7 136 41.9
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 1.9e-13 79.7 79 50.6
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 2.5e-13 79.3 144 36.8
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 4.3e-13 78.6 139 40.3
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.3e-13 77.8 136 41.2
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.3e-13 77.8 136 41.2
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-12 77.0 114 44.7
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-12 77.0 114 44.7
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 1.6e-12 76.6 144 38.9
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 1.6e-12 76.6 107 45.8
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 2.1e-12 76.3 120 39.2
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 2.1e-12 76.3 120 39.2
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 2.1e-12 76.3 148 39.9
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 2.8e-12 75.9 88 45.5
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 3.6e-12 75.5 132 39.4
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 3.6e-12 75.5 88 54.5
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 4.7e-12 75.1 135 40.7
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 1.4e-11 73.6 88 42.0
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 2.3e-11 72.8 87 44.8
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 3.1e-11 72.4 146 38.4
PSO063G2671 Papaver somniferum HOM05D000509 ORTHO05D006393 5.2e-11 71.6 136 39.7
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 6.8e-11 71.2 125 36.8
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.8e-11 71.2 131 39.7
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 3.4e-10 68.9 125 40.0
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 1.3e-09 67.0 123 37.4
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 1.3e-09 67.0 123 37.4
ClCG06G003680 Citrullus lanatus HOM05D000509 ORTHO05D006393 1.3e-09 67.0 102 45.1
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 1.3e-09 67.0 107 43.9
PSO339G4277 Papaver somniferum HOM05D000509 ORTHO05D006393 1.3e-09 67.0 137 37.2
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 1.3e-09 67.0 72 48.6
ATR0680G086 Amborella trichopoda HOM05D000509 ORTHO05D006393 2.2e-09 66.2 111 38.7
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 2.9e-09 65.9 132 37.1
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 6.4e-09 64.7 90 44.4
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 6.4e-09 64.7 90 44.4
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 6.4e-09 64.7 91 46.2
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 6.4e-09 64.7 88 44.3
BolC4t24686H Brassica oleracea HOM05D000509 ORTHO05D006393 8.3e-09 64.3 91 45.1
Aa31LG5G5170 Aethionema arabicum HOM05D000509 ORTHO05D006393 5.4e-08 61.6 98 38.8
AL5G43630 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 5.4e-08 61.6 125 34.4
Atru.chr5.498 Acer truncatum HOM05D000509 ORTHO05D006393 2.1e-07 59.7 49 61.2
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 4.6e-07 58.5 69 46.4
Carub.0005s2804 Capsella rubella HOM05D000509 ORTHO05D006393 7.8e-07 57.8 67 46.3
AL1G53560 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 2.3e-06 56.2 67 46.3
AT4G07940 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 2.3e-06 56.2 125 32.8
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 2.3e-06 56.2 117 33.3


User provided reference genes

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