Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02255 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 1.3e-120 436.4 217 100.0
Aqoxy3G01046 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 2.6e-105 385.6 218 88.5
TAR629G0796 Trochodendron aralioides HOM05D003598 ORTHO05D004198 7.5e-81 304.3 218 67.9
Nn4g24926 Nelumbo nucifera HOM05D003598 ORTHO05D004198 2.0e-78 296.2 218 68.3
GSVIVG01010181001 Vitis vinifera HOM05D003598 ORTHO05D004198 4.6e-78 295.0 218 67.0
TAR371G1198 Trochodendron aralioides HOM05D003598 ORTHO05D004198 1.3e-77 293.5 218 67.0
CSS0049191 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 2.1e-75 286.2 219 66.2
Atru.chr9.2066 Acer truncatum HOM05D003598 ORTHO05D004198 2.8e-75 285.8 219 64.8
Ciclev10032368m.g Citrus clementina HOM05D003598 ORTHO05D004198 4.7e-75 285.0 219 65.8
MBI03_g24013_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 4.7e-75 285.0 218 67.0
Dinv32105 Davidia involucrata HOM05D003598 ORTHO05D004198 1.8e-74 283.1 218 65.1
Ah.01g001620 Amaranthus hybridus HOM05D003598 ORTHO05D004198 1.5e-73 280.0 218 63.8
Sed0014776 Sechium edule HOM05D003598 ORTHO05D004198 1.5e-73 280.0 217 65.9
AUR62000767 Chenopodium quinoa HOM05D003598 ORTHO05D004198 2.6e-73 279.3 218 65.6
PSO063G0008 Papaver somniferum HOM05D003598 ORTHO05D004198 4.4e-73 278.5 218 62.8
ECA240G3477 Erigeron canadensis HOM05D003598 ORTHO05D004198 7.5e-73 277.7 218 63.3
Sed0024830 Sechium edule HOM05D003598 ORTHO05D004198 7.5e-73 277.7 217 65.4
Ah.01g012930 Amaranthus hybridus HOM05D003598 ORTHO05D004198 1.3e-72 276.9 218 61.9
PSO782G0946 Papaver somniferum HOM05D003598 ORTHO05D004198 2.9e-72 275.8 218 61.9
Actinidia11173 Actinidia chinensis HOM05D003598 ORTHO05D004198 3.7e-72 275.4 219 65.3
ATR0618G278 Amborella trichopoda HOM05D003598 ORTHO05D004198 8.3e-72 274.2 217 62.2
AUR62015205 Chenopodium quinoa HOM05D003598 ORTHO05D004198 1.1e-71 273.9 218 64.2
Lj6A721G58 Lonicera japonica HOM05D003598 ORTHO05D004198 1.4e-71 273.5 219 64.8
Lsat_1_v5_gn_3_7261 Lactuca sativa HOM05D003598 ORTHO05D004198 1.9e-71 273.1 216 63.0
TWI53G1744 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 5.4e-71 271.6 220 61.4
vmacro09196 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 5.4e-71 271.6 219 63.5
MELO3C024034.2 Cucumis melo HOM05D003598 ORTHO05D004198 7.1e-71 271.2 219 65.3
DCAR_002566 Daucus carota HOM05D003598 ORTHO05D004198 7.1e-71 271.2 226 61.1
CsaV3_3G031510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 9.2e-71 270.8 217 63.1
Hma1.2p1_0218F.1_g092550 Hydrangea macrophylla HOM05D003598 ORTHO05D004198 1.2e-70 270.4 217 64.1
TWI77G0411 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 1.2e-70 270.4 219 60.7
COL.COLO4_11873 Corchorus olitorius HOM05D003598 ORTHO05D004198 2.1e-70 269.6 219 63.9
Duzib133G1064 Durio zibethinus HOM05D003598 ORTHO05D004198 2.1e-70 269.6 218 61.9
HanXRQChr17g0533671 Helianthus annuus HOM05D003598 ORTHO05D004198 3.5e-70 268.9 217 62.7
HanXRQChr03g0086691 Helianthus annuus HOM05D003598 ORTHO05D004198 4.6e-70 268.5 217 62.2
Oeu042207.1 Olea europaea HOM05D003598 ORTHO05D004198 4.6e-70 268.5 217 65.0
QL02p009504 Quercus lobata HOM05D003598 ORTHO05D004198 4.6e-70 268.5 216 63.9
Gohir.A11G124700 Gossypium hirsutum HOM05D003598 ORTHO05D004198 6.0e-70 268.1 219 62.1
Gorai.007G139000 Gossypium raimondii HOM05D003598 ORTHO05D004198 6.0e-70 268.1 219 62.1
Gohir.D11G129900 Gossypium hirsutum HOM05D003598 ORTHO05D004198 1.3e-69 266.9 219 61.6
Cfa013868 Carpinus fangiana HOM05D003598 ORTHO05D004198 1.7e-69 266.5 218 64.2
Thecc.01G274200 Theobroma cacao HOM05D003598 ORTHO05D004198 2.3e-69 266.2 223 61.4
vmacro12412 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 3.9e-69 265.4 219 63.0
AUR62017668 Chenopodium quinoa HOM05D003598 ORTHO05D004198 5.1e-69 265.0 218 61.5
Rhsim06G0126100 Rhododendron simsii HOM05D003598 ORTHO05D004198 6.6e-69 264.6 219 62.6
MSTRG.1768 Avicennia marina HOM05D003598 ORTHO05D004198 8.6e-69 264.2 217 62.7
Manes.01G073300 Manihot esculenta HOM05D003598 ORTHO05D004198 8.6e-69 264.2 219 63.9
COL.COLO4_09060 Corchorus olitorius HOM05D003598 ORTHO05D004198 1.5e-68 263.5 220 62.7
DCAR_030401 Daucus carota HOM05D003598 ORTHO05D004198 1.9e-68 263.1 195 66.2
PGR042G0762 Punica granatum HOM05D003598 ORTHO05D004198 2.5e-68 262.7 206 65.0
Gohir.D08G204800 Gossypium hirsutum HOM05D003598 ORTHO05D004198 3.3e-68 262.3 219 62.1
Gorai.004G216900 Gossypium raimondii HOM05D003598 ORTHO05D004198 7.3e-68 261.2 219 61.6
CiPaw.07G157700 Carya illinoinensis HOM05D003598 ORTHO05D004198 1.2e-67 260.4 218 62.8
Duzib138G0618 Durio zibethinus HOM05D003598 ORTHO05D004198 1.2e-67 260.4 203 64.5
Potri.005G198900 Populus trichocarpa HOM05D003598 ORTHO05D004198 1.2e-67 260.4 219 62.1
Peaxi162Scf00193g00013 Petunia axillaris HOM05D003598 ORTHO05D004198 1.6e-67 260.0 217 60.8
Migut.E01352 Erythranthe guttata HOM05D003598 ORTHO05D004198 3.6e-67 258.8 218 62.8
CANSAT64G1690 Cannabis sativa HOM05D003598 ORTHO05D004198 4.7e-67 258.5 218 59.6
Potri.002G062200 Populus trichocarpa HOM05D003598 ORTHO05D004198 4.7e-67 258.5 219 61.6
Cpa.g.sc51.45 Carica papaya HOM05D003598 ORTHO05D004198 6.2e-67 258.1 216 62.0
Gohir.A08G186600 Gossypium hirsutum HOM05D003598 ORTHO05D004198 1.4e-66 256.9 219 61.2
Nitab4.5_0002941g0020 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.4e-66 256.9 217 61.8
Cc08_g05000 Coffea canephora HOM05D003598 ORTHO05D004198 1.8e-66 256.5 217 63.1
CiPaw.08G060100 Carya illinoinensis HOM05D003598 ORTHO05D004198 5.2e-66 255.0 218 61.9
SGA_v2.0_scaffold144G35883 Striga asiatica HOM05D003598 ORTHO05D004198 6.8e-66 254.6 216 61.1
VMungo1127G1291 Vigna mungo HOM05D003598 ORTHO05D004198 6.8e-66 254.6 218 60.6
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 8.9e-66 254.2 205 63.4
PGSC0003DMG400005723 Solanum tuberosum HOM05D003598 ORTHO05D004198 8.9e-66 254.2 216 60.2
AUR62005202 Chenopodium quinoa HOM05D003598 ORTHO05D004198 1.5e-65 253.4 205 62.4
Zm00001eb066420 Zea mays HOM05D003598 ORTHO05D004198 1.5e-65 253.4 215 59.5
Zm00001eb066470 Zea mays HOM05D003598 ORTHO05D004198 1.5e-65 253.4 215 59.5
CAN.G1425.3 Capsicum annuum HOM05D003598 ORTHO05D004198 2.0e-65 253.1 216 60.2
EL10Ac9g22923 Beta vulgaris HOM05D003598 ORTHO05D004198 3.4e-65 252.3 196 64.8
Lalb_Chr03g0024851 Lupinus albus HOM05D003598 ORTHO05D004198 3.4e-65 252.3 218 59.2
Hund03395 Selenicereus undatus HOM05D003598 ORTHO05D004198 3.4e-65 252.3 250 55.6
Sopen03g038270 Solanum pennellii HOM05D003598 ORTHO05D004198 3.4e-65 252.3 216 59.7
Prupe.1G345400 Prunus persica HOM05D003598 ORTHO05D004198 4.4e-65 251.9 218 60.1
Solyc03g119420.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 4.4e-65 251.9 216 59.7
THA.LOC104802853 Tarenaya hassleriana HOM05D003598 ORTHO05D004198 7.6e-65 251.1 219 60.3
Solyc08g075730.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 9.9e-65 250.8 217 59.4
Lj3g0003654 Lotus japonicus HOM05D003598 ORTHO05D004198 1.7e-64 250.0 218 59.2
PGSC0003DMG400030870 Solanum tuberosum HOM05D003598 ORTHO05D004198 2.2e-64 249.6 217 59.4
Sopen08g024380 Solanum pennellii HOM05D003598 ORTHO05D004198 2.9e-64 249.2 217 59.0
THA.LOC104820751 Tarenaya hassleriana HOM05D003598 ORTHO05D004198 2.9e-64 249.2 218 59.6
unitig_899.g14735 Utricularia gibba HOM05D003598 ORTHO05D004198 2.9e-64 249.2 216 59.7
arahy.Tifrunner.gnm1.ann1.01A9SY Arachis hypogaea HOM05D003598 ORTHO05D004198 6.4e-64 248.1 218 58.3
SalBow8G4212 Salvia bowleyana HOM05D003598 ORTHO05D004198 6.4e-64 248.1 217 60.8
arahy.Tifrunner.gnm1.ann1.Y4R7AD Arachis hypogaea HOM05D003598 ORTHO05D004198 8.4e-64 247.7 218 57.8
Sabra05G0151500 Salix brachista HOM05D003598 ORTHO05D004198 1.1e-63 247.3 226 58.4
Ca_03027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 1.4e-63 246.9 218 57.8
MD16G1000500 Malus domestica HOM05D003598 ORTHO05D004198 1.4e-63 246.9 219 60.3
Phvul.L003737 Phaseolus vulgaris HOM05D003598 ORTHO05D004198 1.4e-63 246.9 216 59.7
Oeu045722.3 Olea europaea HOM05D003598 ORTHO05D004198 2.4e-63 246.1 204 62.3
Carub.0006s1666 Capsella rubella HOM05D003598 ORTHO05D004198 3.2e-63 245.7 218 59.6
Glyma.12G141400 Glycine max HOM05D003598 ORTHO05D004198 3.2e-63 245.7 218 58.3
AL6G29630 Arabidopsis lyrata HOM05D003598 ORTHO05D004198 5.4e-63 245.0 219 58.9
MBI06_g34034_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 5.4e-63 245.0 206 60.2
Carub.0008s0217 Capsella rubella HOM05D003598 ORTHO05D004198 7.1e-63 244.6 218 59.6
MD13G1007600 Malus domestica HOM05D003598 ORTHO05D004198 1.6e-62 243.4 217 61.3
Medtr4g074480 Medicago truncatula HOM05D003598 ORTHO05D004198 1.6e-62 243.4 218 57.3
Aa31LG11G11250 Aethionema arabicum HOM05D003598 ORTHO05D004198 2.7e-62 242.7 218 56.9
Sp6g25920 Schrenkiella parvula HOM05D003598 ORTHO05D004198 2.7e-62 242.7 218 58.7
Os04g0674400 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 4.6e-62 241.9 215 55.8
Os04g0682050 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 4.6e-62 241.9 215 55.8
MBI06_g36503_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 6.0e-62 241.5 205 60.0
Nitab4.5_0001659g0130 Nicotiana tabacum HOM05D003598 ORTHO05D004198 6.0e-62 241.5 238 55.5
AT5G18400 Arabidopsis thaliana HOM05D003598 ORTHO05D004198 1.0e-61 240.7 219 57.5
CARHR194630 Cardamine hirsuta HOM05D003598 ORTHO05D004198 3.0e-61 239.2 218 58.7
FvH4_4g36731 Fragaria vesca HOM05D003598 ORTHO05D004198 8.6e-61 237.7 217 58.5
CDE04G2679 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.1e-60 237.3 219 52.5
TPR.G32324 Trifolium pratense HOM05D003598 ORTHO05D004198 1.1e-60 237.3 219 56.6
Nitab4.5_0001450g0070 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.9e-60 236.5 210 58.1
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 2.5e-60 236.1 220 56.4
BolC3t13511H Brassica oleracea HOM05D003598 ORTHO05D004198 2.5e-60 236.1 220 56.4
BraA03t10207Z Brassica rapa HOM05D003598 ORTHO05D004198 2.5e-60 236.1 220 56.4
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 4.3e-60 235.3 217 57.6
Rhsim04G0081000 Rhododendron simsii HOM05D003598 ORTHO05D004198 5.6e-60 235.0 174 67.2
CSS0032311 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 1.2e-59 233.8 217 58.1
Psat7g173800 Pisum sativum HOM05D003598 ORTHO05D004198 1.2e-59 233.8 218 55.0
CSS0011637 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D000909 1.6e-59 233.4 196 61.7
Thhalv10015717m.g Eutrema salsugineum HOM05D003598 ORTHO05D004198 3.6e-59 232.3 218 59.2
A10p21130 Brassica napus HOM05D003598 ORTHO05D004198 4.7e-59 231.9 207 59.4
RcHm_v2.0_Chr4g0446451 Rosa chinensis HOM05D003598 ORTHO05D004198 8.1e-59 231.1 215 59.1
Nn6g34923 Nelumbo nucifera HOM05D003598 ORTHO05D004198 1.4e-58 230.3 226 55.3
HPP92_009730 Vanilla planifolia HOM05D003598 ORTHO05D004198 3.1e-58 229.2 218 56.0
Glyma.11G103000 Glycine max HOM05D003598 ORTHO05D004198 8.9e-58 227.6 206 56.8
SGA_v2.0_scaffold277G46719 Striga asiatica HOM05D003598 ORTHO05D004198 1.2e-57 227.3 137 77.4
BcaC04g18694 Brassica carinata HOM05D003598 ORTHO05D004198 2.6e-57 226.1 205 58.0
Sabra02G0050100 Salix brachista HOM05D003598 ORTHO05D004198 2.6e-57 226.1 220 57.7
Cc08_g04900 Coffea canephora HOM05D003598 ORTHO05D004198 1.7e-56 223.4 219 56.6
BolC9t58693H Brassica oleracea HOM05D003598 ORTHO05D004198 2.9e-56 222.6 218 55.5
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 4.2e-55 218.8 208 55.3
SEGI_23700 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 5.4e-55 218.4 231 50.6
A03p08820 Brassica napus HOM05D003598 ORTHO05D004198 7.1e-55 218.0 215 54.4
C03p10310 Brassica napus HOM05D003598 ORTHO05D004198 1.6e-54 216.9 216 53.7
Medtr4g108000 Medicago truncatula HOM05D003598 ORTHO05D004198 1.6e-54 216.9 204 53.9
SEGI_19284 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 3.5e-54 215.7 231 50.2
Ah.07g198410 Amaranthus hybridus HOM05D003598 ORTHO05D004198 1.3e-53 213.8 127 78.7
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 3.0e-53 212.6 218 53.7
Dinv05241 Davidia involucrata HOM05D003598 ORTHO05D004198 3.9e-53 212.2 180 60.6
Hund19509 Selenicereus undatus HOM05D003598 ORTHO05D004198 1.5e-52 210.3 216 53.7
Eucgr.J00852 Eucalyptus grandis HOM05D003598 ORTHO05D004198 2.8e-51 206.1 182 58.8
Sc20g0002190 Simmondsia chinensis HOM05D003598 ORTHO05D004198 6.2e-51 204.9 147 68.0
CDE02G3181 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.4e-50 203.8 218 48.6
Hund19574 Selenicereus undatus HOM05D003598 ORTHO05D004198 1.7e-48 196.8 120 76.7
Sc10g0007060 Simmondsia chinensis HOM05D003598 ORTHO05D004198 7.1e-47 191.4 183 55.7
Cc00_g17080 Coffea canephora HOM05D003598 ORTHO05D004198 1.2e-46 190.7 157 64.3
Haze_22545 Corylus avellana HOM05D003598 ORTHO05D004198 7.9e-46 188.0 183 56.3
Cc00_g23020 Coffea canephora HOM05D003598 ORTHO05D004198 6.7e-45 184.9 195 54.4
Hund19575 Selenicereus undatus HOM05D003598 ORTHO05D004198 8.7e-45 184.5 106 76.4
Hund31482 Selenicereus undatus HOM05D003598 ORTHO05D004198 1.5e-44 183.7 106 77.4
Prupe.8G036300 Prunus persica HOM05D003598 ORTHO05D004198 6.2e-43 178.3 220 48.6
CDE05G1904 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.4e-42 177.2 126 62.7
SMO367G0289 Selaginella moellendorffii HOM05D003598 ORTHO05D004198 2.4e-42 176.4 231 44.2
CDE05G0161 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.5e-41 173.7 180 48.3
Ca_14027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 4.5e-41 172.2 180 52.8
Glyma.U018351 Glycine max HOM05D003598 ORTHO05D004198 2.9e-40 169.5 107 76.6
CsaV3_3G032510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 1.4e-39 167.2 97 80.4
Mapoly0032s0120 Marchantia polymorpha HOM05D003598 ORTHO05D004198 5.5e-39 165.2 283 39.2
AagrBONN_evm.TU.Sc2ySwM_368.147 Anthoceros agrestis HOM05D003598 ORTHO05D004198 3.5e-38 162.5 256 39.8
BraA10t44179Z Brassica rapa HOM05D001989 ORTHO05D004198 3.5e-38 162.5 181 50.8
ClCG10G011850 Citrullus lanatus HOM05D003598 ORTHO05D004198 1.5e-36 157.1 180 50.0
SGA_v2.0_scaffold49G18286 Striga asiatica HOM05D003598 ORTHO05D004198 4.3e-36 155.6 126 62.7
Pp3c13_7070 Physcomitrium patens HOM05D003598 ORTHO05D004198 5.6e-36 155.2 266 38.3
Cc08_g04800 Coffea canephora HOM05D003598 ORTHO05D004198 4.5e-33 145.6 178 49.4
Pp3c8_19850 Physcomitrium patens HOM05D003598 ORTHO05D004198 4.5e-33 145.6 265 36.2
Lsat_1_v5_gn_3_62741 Lactuca sativa HOM05D003598 ORTHO05D004198 7.6e-33 144.8 120 63.3
Lj1g0005490 Lotus japonicus HOM05D003598 ORTHO05D004198 2.2e-32 143.3 207 44.9
QL09p042139 Quercus lobata HOM05D003598 ORTHO05D004198 1.0e-29 134.4 179 45.3
BcaNung04934 Brassica carinata HOM05D003598 ORTHO05D004198 1.8e-29 133.7 86 74.4
CBR_g263 Chara braunii HOM05D003598 ORTHO05D004198 7.4e-28 128.3 169 43.2
RcHm_v2.0_Chr3g0449691 Rosa chinensis HOM05D003598 ORTHO05D004198 9.6e-28 127.9 88 70.5
Actinidia24398 Actinidia chinensis HOM05D003598 ORTHO05D004198 1.3e-24 117.5 74 74.3
Sc06g0004000 Simmondsia chinensis HOM05D003598 ORTHO05D004198 3.6e-22 109.4 135 49.6
Cc00_g26130 Coffea canephora HOM05D003598 ORTHO05D004198 1.8e-21 107.1 158 44.3
Cre11.g475350 Chlamydomonas reinhardtii HOM05D003598 ORTHO05D004198 5.1e-21 105.5 104 51.9
Lsat_1_v5_gn_6_87300 Lactuca sativa HOM05D003598 ORTHO05D004198 3.3e-20 102.8 144 41.7
PRCOL_00002502 Prasinoderma coloniale HOM05D003598 ORTHO05D004198 2.4e-18 96.7 246 34.1
Ca_03029_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 5.1e-13 79.0 38 89.5
SEGI_32675 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 4.4e-12 75.9 57 63.2
Lsat_1_v5_gn_6_87320 Lactuca sativa HOM05D003598 ORTHO05D009814 1.8e-10 70.5 144 35.4
Cfa022453 Carpinus fangiana HOM05D003598 ORTHO05D004198 4.1e-10 69.3 145 33.8
MCO04G029 Micromonas commoda HOM05D003598 ORTHO05D004198 2.9e-08 63.2 57 50.9
Medtr2g009110 Medicago truncatula HOM05D003084 ORTHO05D003580 3.6e-06 56.2 38 73.7


User provided reference genes

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