Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 0.0e+00 1811.6 909 100.0
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 0.0e+00 1811.6 909 100.0
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 4.9e-251 871.7 515 83.5
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 9.1e-221 771.2 518 71.0
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 1.6e-209 733.8 825 47.5
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 7.5e-207 724.9 824 47.7
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 1.0e-179 634.8 735 46.5
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-177 625.2 775 43.6
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-177 625.2 775 43.6
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-177 625.2 775 43.6
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 1.4e-176 624.4 885 41.0
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 3.5e-172 609.8 794 42.7
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 9.9e-151 538.5 822 38.4
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 1.3e-150 538.1 426 59.6
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.1e-148 530.8 681 43.5
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 1.3e-145 521.5 720 41.8
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 2.1e-145 520.8 335 75.2
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 1.4e-144 518.1 794 38.0
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 2.5e-138 497.3 383 61.4
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 1.9e-133 481.1 409 57.0
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 2.7e-132 477.2 471 51.2
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 3.5e-132 476.9 539 47.1
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 2.9e-126 457.2 870 35.5
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 5.0e-126 456.4 413 54.2
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 1.8e-120 438.0 434 52.5
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 5.9e-119 433.0 353 57.8
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.3e-118 431.8 613 40.6
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 1.3e-118 431.8 527 43.6
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.7e-114 416.4 504 45.4
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 6.5e-110 402.9 345 55.1
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.7e-106 389.0 440 47.3
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 2.9e-102 377.5 395 48.6
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-99 368.6 375 50.4
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 1.8e-96 358.2 387 50.6
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.2e-80 304.3 276 52.9
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.7e-79 301.2 261 55.2
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 5.6e-77 293.5 284 49.6
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 7.8e-71 273.1 239 54.0
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.0e-70 271.2 326 45.4
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 2.8e-68 264.6 493 35.9
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 6.2e-68 263.5 447 36.7
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 1.2e-60 239.2 270 44.4
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 3.6e-60 237.7 272 44.9
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 3.6e-60 237.7 170 59.4
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 4.7e-52 210.7 402 33.6
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-52 209.9 360 37.5
Lalb_Chr00c21g0405631 Lupinus albus HOM05D004909 ORTHO05D009316 8.1e-52 209.9 213 50.7
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 6.8e-51 206.8 396 34.1
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 3.5e-47 194.5 258 42.6
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.6e-44 185.7 265 43.4
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 2.8e-44 184.9 428 31.1
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 3.6e-44 184.5 476 27.7
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.2e-42 179.5 170 52.4
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 2.9e-41 174.9 147 59.9
Lalb_Chr00c21g0405611 Lupinus albus HOM05D004909 ORTHO05D009316 6.4e-41 173.7 116 70.7
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.8e-36 158.3 208 41.8
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 2.8e-36 158.3 504 26.8
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 5.8e-34 150.6 113 59.3
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 2.3e-30 138.7 136 47.8
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 1.5e-29 136.0 299 33.1
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.9e-29 135.6 102 60.8
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.9e-29 135.6 102 60.8
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 3.3e-29 134.8 299 33.8
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 5.6e-29 134.0 94 61.7
CAN.G26.10 Capsicum annuum HOM05D004909 ORTHO05D009316 2.1e-28 132.1 102 60.8
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 2.8e-28 131.7 101 63.4
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.2e-28 130.6 189 39.2
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 5.5e-24 117.5 165 40.6
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 2.3e-22 112.1 96 53.1
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 2.3e-22 112.1 96 53.1
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 3.0e-22 111.7 108 50.9
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.6e-20 105.9 103 53.4
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 4.8e-20 104.4 113 47.8
SGA_v2.0_scaffold328G48796 Striga asiatica HOM05D004909 ORTHO05D009316 1.4e-19 102.8 59 72.9
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.3e-19 100.9 78 60.3
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 5.5e-16 90.9 282 29.8
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 2.1e-15 89.0 83 56.6
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 2.1e-15 89.0 184 34.8
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 2.1e-15 89.0 63 60.3
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 9.7e-13 80.1 181 34.3
unitig_87.g28025 Utricularia gibba HOM05D004909 ORTHO05D009316 5.3e-11 74.3 64 60.9
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 2.6e-10 72.0 98 38.8
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 2.6e-10 72.0 251 27.1
Hma1.2p1_0003F.1_g003590 Hydrangea macrophylla HOM05D004909 ORTHO05D009316 4.5e-10 71.2 171 29.2
Oeu013314.1 Olea europaea HOM05D000129 ORTHO05D000144 3.8e-09 68.2 53 56.6
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 6.5e-09 67.4 148 29.1
AUR62044035 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.5e-09 67.4 115 35.7
Peaxi162Scf00625g00036 Petunia axillaris HOM05D002660 ORTHO05D003902 3.6e-07 61.6 60 46.7
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 1.4e-06 59.7 172 26.7
Oeu057349.1 Olea europaea HOM05D013539 ORTHO05D014921 3.9e-06 58.2 112 33.0
Nitab4.5_0000580g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 8.8e-06 57.0 77 37.7


User provided reference genes

Program Settings