Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 5.0e-101 371.3 216 100.0
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 2.3e-61 239.6 211 65.4
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 3.0e-61 239.2 213 70.9
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 6.6e-61 238.0 214 64.0
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 3.6e-59 232.3 208 60.6
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 1.3e-56 223.8 210 64.3
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.9e-56 221.9 209 58.4
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 8.3e-56 221.1 209 59.8
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 1.9e-55 219.9 215 56.3
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 2.4e-55 219.5 213 56.8
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 3.2e-55 219.2 209 56.5
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 5.4e-55 218.4 218 67.0
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 9.2e-55 217.6 218 66.1
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.7e-54 216.1 214 64.0
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 3.5e-54 215.7 217 59.9
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 3.5e-54 215.7 209 62.7
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 4.6e-54 215.3 213 59.2
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 1.0e-53 214.2 212 55.7
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.0e-53 214.2 212 64.2
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 2.3e-53 213.0 209 61.7
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 2.3e-53 213.0 211 60.7
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 3.9e-53 212.2 211 55.5
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 3.9e-53 212.2 211 55.5
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 3.9e-53 212.2 215 55.3
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 3.9e-53 212.2 215 55.3
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 3.9e-53 212.2 215 61.9
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 5.1e-53 211.8 211 60.7
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 5.1e-53 211.8 211 59.2
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 6.6e-53 211.5 212 55.7
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 6.6e-53 211.5 213 57.3
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 6.6e-53 211.5 212 58.5
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 6.6e-53 211.5 211 55.9
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 1.1e-52 210.7 215 58.1
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 1.1e-52 210.7 215 58.1
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.9e-52 209.9 209 55.5
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 2.5e-52 209.5 212 52.8
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 2.5e-52 209.5 212 52.4
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 2.5e-52 209.5 224 62.1
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 2.5e-52 209.5 216 60.2
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 2.5e-52 209.5 216 60.2
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 2.5e-52 209.5 216 57.9
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 3.3e-52 209.1 212 52.8
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.3e-52 208.8 216 60.2
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 7.3e-52 208.0 216 57.9
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 7.3e-52 208.0 211 57.8
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 1.2e-51 207.2 213 58.7
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.2e-51 207.2 212 58.0
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.2e-51 207.2 213 58.7
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.2e-51 207.2 213 54.9
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.6e-51 206.8 213 54.9
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 1.6e-51 206.8 222 62.6
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 2.8e-51 206.1 211 51.2
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 3.6e-51 205.7 211 55.0
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 8.1e-51 204.5 214 54.7
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 1.1e-50 204.1 222 61.7
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.4e-50 203.8 212 55.7
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 1.8e-50 203.4 217 54.8
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 1.8e-50 203.4 213 63.4
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 1.8e-50 203.4 213 61.0
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 2.3e-50 203.0 212 50.9
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 2.3e-50 203.0 215 60.5
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 2.3e-50 203.0 215 61.4
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 4.0e-50 202.2 211 50.7
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 5.2e-50 201.8 214 58.4
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 6.8e-50 201.4 204 52.5
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 6.8e-50 201.4 206 51.5
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 8.9e-50 201.1 211 50.7
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 8.9e-50 201.1 213 63.4
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 1.2e-49 200.7 211 50.7
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 1.2e-49 200.7 204 52.0
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 1.5e-49 200.3 211 59.2
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 2.0e-49 199.9 215 58.6
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 2.6e-49 199.5 206 51.0
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 4.4e-49 198.7 213 54.5
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 5.8e-49 198.4 218 59.2
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 5.8e-49 198.4 214 57.0
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.7e-48 196.8 212 61.3
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 2.2e-48 196.4 209 53.1
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 2.2e-48 196.4 215 61.9
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 3.8e-48 195.7 204 54.4
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 4.9e-48 195.3 212 52.8
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 8.4e-48 194.5 211 53.1
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 1.1e-47 194.1 159 66.7
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.4e-47 193.7 216 57.9
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 1.4e-47 193.7 221 52.9
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 3.2e-47 192.6 221 58.4
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 4.1e-47 192.2 215 60.0
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 7.1e-47 191.4 213 53.1
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 2.7e-46 189.5 216 53.2
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 3.0e-45 186.0 219 51.1
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 3.0e-45 186.0 161 66.5
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 8.6e-45 184.5 212 49.5
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 1.1e-44 184.1 217 50.7
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 1.9e-44 183.3 216 58.3
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 2.5e-44 183.0 223 49.8
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 2.5e-44 183.0 208 60.1
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 4.3e-44 182.2 215 52.1
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 4.3e-44 182.2 146 67.8
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 5.6e-44 181.8 212 51.9
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 7.3e-44 181.4 212 48.6
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 2.8e-43 179.5 151 64.2
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 8.1e-43 177.9 202 58.4
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 1.4e-42 177.2 213 55.9
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 3.1e-42 176.0 202 51.5
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 5.2e-42 175.3 223 49.8
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 6.9e-42 174.9 225 53.3
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 6.9e-42 174.9 216 50.5
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 2.6e-41 172.9 148 61.5
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 8.4e-40 167.9 219 47.0
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 1.1e-39 167.5 210 51.9
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 4.2e-39 165.6 201 49.3
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 4.2e-39 165.6 213 52.1
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 1.7e-37 160.2 215 47.4
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 6.6e-37 158.3 161 52.2
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 2.5e-36 156.4 132 64.4
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 4.3e-36 155.6 122 63.9
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 5.6e-36 155.2 131 61.8
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 1.6e-35 153.7 199 52.3
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 2.8e-35 152.9 148 56.8
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 6.9e-34 148.3 158 48.7
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 1.2e-33 147.5 217 50.2
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 1.7e-32 143.7 210 39.0
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 3.8e-32 142.5 135 55.6
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 4.9e-32 142.1 207 38.2
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 4.2e-31 139.0 223 40.8
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 2.1e-30 136.7 150 46.7
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 3.3e-28 129.4 135 53.3
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 4.3e-28 129.0 207 40.1
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 7.4e-28 128.3 124 49.2
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 9.6e-28 127.9 211 39.8
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 9.6e-28 127.9 109 66.1
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 9.6e-28 127.9 137 53.3
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 2.8e-27 126.3 218 38.5
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 8.1e-27 124.8 109 65.1
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 4.0e-26 122.5 128 57.0
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 2.9e-24 116.3 212 39.2
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 4.9e-24 115.5 83 56.6
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 5.5e-23 112.1 149 42.3
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 2.3e-21 106.7 105 49.5
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 7.4e-20 101.7 202 38.1
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 7.4e-20 101.7 219 34.2
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 9.6e-20 101.3 97 48.5
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 3.7e-19 99.4 112 46.4
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 6.2e-19 98.6 87 48.3
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.8e-18 97.1 132 40.2
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 2.4e-18 96.7 133 38.3
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 3.1e-18 96.3 88 51.1
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 6.9e-18 95.1 133 39.1
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 2.2e-16 90.1 109 51.4
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 5.5e-15 85.5 106 52.8
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 1.0e-13 81.3 111 41.4
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 2.3e-13 80.1 205 32.7
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 5.3e-10 68.9 105 41.0
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 2.0e-09 67.0 90 47.8
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 3.4e-09 66.2 84 51.2
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 1.9e-07 60.5 84 40.5


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