Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01995 Aquilegia oxysepala HOM05D000269 ORTHO05D078761 1.1e-59 233.0 113 100.0
Nn2g10503 Nelumbo nucifera HOM05D000269 ORTHO05D005780 1.2e-18 96.7 107 54.2
PSO339G0756 Papaver somniferum HOM05D000269 ORTHO05D005780 3.4e-16 88.6 106 47.2
PSO384G1566 Papaver somniferum HOM05D000269 ORTHO05D005780 5.8e-16 87.8 107 46.7
Aqoxy4G03050 Aquilegia oxysepala HOM05D000269 ORTHO05D005780 8.3e-15 84.0 107 46.7
Thecc.10G057900 Theobroma cacao HOM05D000269 ORTHO05D005780 4.6e-13 78.2 84 51.2
GSVIVG01016641001 Vitis vinifera HOM05D000269 ORTHO05D005780 1.0e-12 77.0 83 49.4
Duzib114G0270 Durio zibethinus HOM05D000269 ORTHO05D005780 3.9e-12 75.1 71 57.7
Potri.010G211400 Populus trichocarpa HOM05D000269 ORTHO05D005780 3.9e-12 75.1 61 63.9
Sabra08G0035500 Salix brachista HOM05D000269 ORTHO05D005780 1.1e-11 73.6 73 56.2
TAR633G2825 Trochodendron aralioides HOM05D000269 ORTHO05D005780 1.1e-11 73.6 68 61.8
CAN.G1339.6 Capsicum annuum HOM05D000269 ORTHO05D005780 5.6e-11 71.2 106 42.5
PGSC0003DMG400023515 Solanum tuberosum HOM05D000269 ORTHO05D005780 7.3e-11 70.9 106 42.5
Actinidia13853 Actinidia chinensis HOM05D000269 ORTHO05D005780 1.2e-10 70.1 69 53.6
Eucgr.G02892 Eucalyptus grandis HOM05D000269 ORTHO05D005780 1.2e-10 70.1 84 50.0
Nitab4.5_0000914g0310 Nicotiana tabacum HOM05D000269 ORTHO05D005780 1.6e-10 69.7 84 47.6
Solyc05g054740.3 Solanum lycopersicum HOM05D000269 ORTHO05D005780 1.6e-10 69.7 61 59.0
CANSAT56G0173 Cannabis sativa HOM05D000269 ORTHO05D005780 6.2e-10 67.8 106 43.4
Sabra10G0163400 Salix brachista HOM05D000269 ORTHO05D005780 6.2e-10 67.8 83 49.4
Nitab4.5_0004055g0090 Nicotiana tabacum HOM05D000269 ORTHO05D005780 8.1e-10 67.4 84 45.2
Sopen05g033210 Solanum pennellii HOM05D000269 ORTHO05D005780 8.1e-10 67.4 61 57.4
CSS0042668 Camellia sinensis var. sinensis HOM05D000269 ORTHO05D005780 1.4e-09 66.6 83 47.0
Sc09g0007190 Simmondsia chinensis HOM05D000269 ORTHO05D005780 1.4e-09 66.6 79 46.8
Haze_16993 Corylus avellana HOM05D000269 ORTHO05D005780 1.8e-09 66.2 70 55.7
QL08p057946 Quercus lobata HOM05D000269 ORTHO05D005780 2.3e-09 65.9 83 44.6
Gohir.A10G211400 Gossypium hirsutum HOM05D000269 ORTHO05D005780 4.0e-09 65.1 61 62.3
FAN06G1581 Fragaria x ananassa HOM05D000269 ORTHO05D005780 5.2e-09 64.7 85 44.7
MELO3C025473.2 Cucumis melo HOM05D000269 ORTHO05D005780 6.8e-09 64.3 84 46.4
Potri.008G049500 Populus trichocarpa HOM05D000269 ORTHO05D005780 6.8e-09 64.3 83 47.0
Ah.10g033230 Amaranthus hybridus HOM05D000269 ORTHO05D005780 8.9e-09 63.9 77 42.9
Cfa001541 Carpinus fangiana HOM05D000269 ORTHO05D005780 8.9e-09 63.9 74 51.4
Cc02_g08490 Coffea canephora HOM05D000269 ORTHO05D005780 8.9e-09 63.9 88 42.0
Medtr7g022870 Medicago truncatula HOM05D000269 ORTHO05D005780 8.9e-09 63.9 56 57.1
Peaxi162Scf00015g02217 Petunia axillaris HOM05D000269 ORTHO05D005780 8.9e-09 63.9 69 49.3
CsaV3_5G026240 Cucumis sativus L. HOM05D000269 ORTHO05D005780 1.2e-08 63.5 52 57.7
Dinv31408 Davidia involucrata HOM05D000269 ORTHO05D005780 1.2e-08 63.5 83 47.0
Sed0024194 Sechium edule HOM05D000269 ORTHO05D005780 1.2e-08 63.5 61 55.7
Atru.chr12.563 Acer truncatum HOM05D000269 ORTHO05D005780 2.0e-08 62.8 55 56.4
FvH4_7g21210 Fragaria vesca HOM05D000269 ORTHO05D005780 2.0e-08 62.8 85 43.5
FAN10G3639 Fragaria x ananassa HOM05D000269 ORTHO05D005780 2.0e-08 62.8 85 43.5
Lsat_1_v5_gn_9_66481 Lactuca sativa HOM05D000269 ORTHO05D005780 2.0e-08 62.8 69 53.6
Phvul.008G015600 Phaseolus vulgaris HOM05D000269 ORTHO05D005780 2.0e-08 62.8 112 42.9
ATR0033G011 Amborella trichopoda HOM05D000269 ORTHO05D005780 2.6e-08 62.4 69 52.2
Prupe.2G227400 Prunus persica HOM05D000269 ORTHO05D005780 2.6e-08 62.4 70 50.0
Rhsim09G0158600 Rhododendron simsii HOM05D000269 ORTHO05D005780 2.6e-08 62.4 69 46.4
TWI38G1332 Tripterygium wilfordii HOM05D000269 ORTHO05D005780 2.6e-08 62.4 66 53.0
EL10Ac2g03460 Beta vulgaris HOM05D000269 ORTHO05D005780 4.4e-08 61.6 77 40.3
FAN01G1169 Fragaria x ananassa HOM05D000269 ORTHO05D005780 4.4e-08 61.6 85 42.4
FAN06G4499 Fragaria x ananassa HOM05D000269 ORTHO05D005780 4.4e-08 61.6 85 42.4
Manes.07G110200 Manihot esculenta HOM05D000269 ORTHO05D005780 4.4e-08 61.6 71 53.5
Psat3g185920 Pisum sativum HOM05D000269 ORTHO05D005780 4.4e-08 61.6 72 47.2
Ciclev10030847m.g Citrus clementina HOM05D000269 ORTHO05D005780 5.8e-08 61.2 83 44.6
DCAR_015230 Daucus carota HOM05D000269 ORTHO05D005780 5.8e-08 61.2 107 39.3
Gorai.011G246300 Gossypium raimondii HOM05D000269 ORTHO05D005780 5.8e-08 61.2 61 59.0
Glyma.18G286000 Glycine max HOM05D000269 ORTHO05D005780 7.5e-08 60.8 64 54.7
Lj8A90T47 Lonicera japonica HOM05D000269 ORTHO05D005780 7.5e-08 60.8 71 50.7
TPR.G15512 Trifolium pratense HOM05D000269 ORTHO05D005780 7.5e-08 60.8 56 55.4
PGR142G3598 Punica granatum HOM05D000269 ORTHO05D005780 9.9e-08 60.5 70 52.9
Sed0004589 Sechium edule HOM05D000269 ORTHO05D005780 9.9e-08 60.5 61 52.5
ECA232G4498 Erigeron canadensis HOM05D000269 ORTHO05D005780 1.3e-07 60.1 106 37.7
Glyma.02G095500 Glycine max HOM05D000269 ORTHO05D005780 1.3e-07 60.1 64 53.1
VMungo1383G0934 Vigna mungo HOM05D000269 ORTHO05D005780 1.3e-07 60.1 64 53.1
Manes.10G037500 Manihot esculenta HOM05D000269 ORTHO05D005780 1.7e-07 59.7 61 52.5
RcHm_v2.0_Chr1g0365661 Rosa chinensis HOM05D000269 ORTHO05D005780 1.7e-07 59.7 85 41.2
CiPaw.02G180000 Carya illinoinensis HOM05D000269 ORTHO05D005780 2.2e-07 59.3 73 47.9
AUR62035960 Chenopodium quinoa HOM05D000269 ORTHO05D005780 2.2e-07 59.3 77 41.6
Glyma.13G043300 Glycine max HOM05D000269 ORTHO05D005780 2.2e-07 59.3 64 53.1
HanXRQChr08g0220011 Helianthus annuus HOM05D000269 ORTHO05D005780 2.2e-07 59.3 71 45.1
Lalb_Chr17g0336281 Lupinus albus HOM05D000269 ORTHO05D005780 2.2e-07 59.3 64 51.6
Glyma.16G124300 Glycine max HOM05D000269 ORTHO05D005780 2.9e-07 58.9 64 53.1
Lalb_Chr10g0091931 Lupinus albus HOM05D000269 ORTHO05D005780 2.9e-07 58.9 65 50.8
arahy.Tifrunner.gnm1.ann1.M9HGHS Arachis hypogaea HOM05D000269 ORTHO05D005780 3.7e-07 58.5 64 53.1
arahy.Tifrunner.gnm1.ann1.NDIA0C Arachis hypogaea HOM05D000269 ORTHO05D005780 3.7e-07 58.5 64 53.1
AUR62022529 Chenopodium quinoa HOM05D000269 ORTHO05D005780 3.7e-07 58.5 77 42.9
MBI14_g30583_MAGBIO Magnolia biondii HOM05D000269 ORTHO05D005780 3.7e-07 58.5 53 56.6
SalBow6G1581 Salvia bowleyana HOM05D000269 ORTHO05D005780 3.7e-07 58.5 61 50.8
Migut.F01516 Erythranthe guttata HOM05D000269 ORTHO05D005780 6.4e-07 57.8 115 37.4
MD07G1189900 Malus domestica HOM05D000269 ORTHO05D005780 8.3e-07 57.4 69 47.8
Ah.16g107590 Amaranthus hybridus HOM05D000269 ORTHO05D005780 1.1e-06 57.0 77 40.3
ClCG09G020210 Citrullus lanatus HOM05D000269 ORTHO05D005780 1.4e-06 56.6 85 43.5
Oeu025630.1 Olea europaea HOM05D000269 ORTHO05D005780 1.4e-06 56.6 54 53.7
Hund22415 Selenicereus undatus HOM05D000269 ORTHO05D005780 1.4e-06 56.6 78 43.6
HanXRQChr09g0247651 Helianthus annuus HOM05D000269 ORTHO05D005780 4.1e-06 55.1 65 53.8
Hma1.2p1_0402F.1_g145070 Hydrangea macrophylla HOM05D000269 ORTHO05D005780 4.1e-06 55.1 62 51.6
Gohir.A05G351300 Gossypium hirsutum HOM05D000269 ORTHO05D005780 7.1e-06 54.3 108 37.0
Hma1.2p1_1483F.1_g286270 Hydrangea macrophylla HOM05D000269 ORTHO05D005780 7.1e-06 54.3 62 51.6
Lj1g0003201 Lotus japonicus HOM05D000269 ORTHO05D005780 9.2e-06 53.9 42 59.5


User provided reference genes

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