Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 2.8e-257 891.7 554 100.0
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 1.8e-118 430.6 536 58.6
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 9.1e-115 418.3 576 56.1
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 1.7e-108 397.5 582 56.4
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 9.1e-107 391.7 570 52.6
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 1.1e-104 384.8 575 51.7
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.5e-104 384.4 486 55.3
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 2.1e-103 380.6 582 55.3
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 4.7e-103 379.4 582 55.2
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 6.1e-103 379.0 503 54.3
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 6.1e-103 379.0 536 57.5
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 1.8e-102 377.5 527 52.9
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 2.3e-102 377.1 576 48.3
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 3.0e-102 376.7 583 48.4
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 9.8e-101 371.7 554 50.9
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 8.3e-100 368.6 577 54.6
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 8.3e-100 368.6 574 48.6
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.1e-99 368.2 528 50.6
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.4e-99 367.1 559 50.4
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 7.0e-99 365.5 575 53.9
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 1.6e-98 364.4 490 52.2
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 2.0e-98 364.0 495 51.1
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 2.0e-98 364.0 560 48.6
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 4.5e-98 362.8 473 55.8
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 4.5e-98 362.8 556 50.0
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 5.9e-98 362.5 539 54.9
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 7.8e-98 362.1 530 50.2
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 7.8e-98 362.1 583 49.1
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 3.9e-97 359.8 583 48.4
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 5.0e-97 359.4 560 54.5
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 5.0e-97 359.4 541 53.0
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 8.6e-97 358.6 494 59.5
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.1e-96 358.2 574 48.4
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.1e-96 358.2 529 49.9
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 1.5e-96 357.8 582 48.3
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 1.9e-96 357.5 567 49.6
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 5.6e-96 355.9 587 47.4
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 1.2e-95 354.8 574 47.9
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 1.2e-95 354.8 574 47.9
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 2.8e-95 353.6 492 53.7
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 6.1e-95 352.4 574 47.9
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 6.1e-95 352.4 574 47.9
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 8.0e-95 352.1 569 50.8
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 8.9e-94 348.6 582 50.2
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 8.9e-94 348.6 490 53.1
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 1.2e-93 348.2 558 49.3
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.5e-93 347.8 474 53.0
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.5e-93 347.8 474 53.0
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 2.0e-93 347.4 481 58.6
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 2.6e-93 347.1 591 48.1
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 3.4e-93 346.7 562 49.1
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 3.4e-93 346.7 581 49.9
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 5.8e-93 345.9 571 49.2
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 7.5e-93 345.5 495 57.0
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 2.9e-92 343.6 461 51.8
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 3.7e-92 343.2 554 48.9
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 6.4e-92 342.4 577 48.4
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 7.0e-91 339.0 497 51.1
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 2.3e-89 334.0 529 49.1
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 3.0e-89 333.6 514 49.2
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 3.0e-89 333.6 516 50.0
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 3.9e-89 333.2 505 49.9
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 6.6e-89 332.4 554 49.1
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.6e-87 327.8 548 46.9
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 8.0e-87 325.5 507 50.7
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 1.1e-86 325.1 494 50.8
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 6.8e-86 322.4 561 48.3
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 1.2e-85 321.6 472 50.6
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 5.8e-85 319.3 588 42.5
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 2.2e-84 317.4 563 48.7
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 2.9e-84 317.0 534 50.0
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.1e-83 315.1 556 47.7
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 1.4e-83 314.7 480 56.0
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 4.1e-83 313.2 572 50.9
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 9.2e-83 312.0 573 46.4
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 2.7e-82 310.5 494 49.4
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 2.3e-81 307.4 521 48.9
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 3.0e-81 307.0 569 45.9
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 3.9e-81 306.6 524 49.4
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 1.1e-80 305.1 457 51.6
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 1.5e-80 304.7 591 45.7
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 5.6e-80 302.8 326 49.1
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 1.2e-79 301.6 478 53.8
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 2.1e-79 300.8 544 47.4
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 6.2e-79 299.3 443 49.4
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 2.3e-78 297.4 571 44.0
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 1.2e-69 268.5 487 43.7
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 2.4e-67 260.8 507 42.4
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 3.9e-49 200.3 315 58.4
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 2.2e-44 184.5 491 39.5
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 1.9e-43 181.4 198 46.5
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 3.2e-43 180.6 203 43.8
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 8.7e-41 172.6 252 63.5
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 6.9e-38 162.9 241 62.2
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 3.2e-35 154.1 492 40.9
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 5.5e-35 153.3 493 31.8
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 8.7e-33 146.0 535 35.3
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 1.2e-21 109.0 170 37.6
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 1.8e-17 95.1 101 48.5
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 2.6e-16 91.3 105 66.7
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 9.7e-16 89.4 184 50.0
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 5.3e-14 83.6 115 39.1
PRCOL_00006441 Prasinoderma coloniale HOM05D007104 ORTHO05D008851 1.4e-06 58.9 196 23.5
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 2.4e-06 58.2 101 36.6
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 3.1e-06 57.8 101 37.6
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 5.3e-06 57.0 186 33.9
Dinv31157 Davidia involucrata HOM05D007063 ORTHO05D008822 7.0e-06 56.6 103 35.0


User provided reference genes

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