Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 0.0e+00 2058.1 1091 100.0
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 5.0e-72 277.3 1090 30.0
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 1.3e-56 226.1 1245 26.8
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 8.5e-40 170.2 1165 27.1
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 5.5e-39 167.5 1353 25.0
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 1.8e-37 162.5 1288 25.5
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 8.8e-37 160.2 1450 24.4
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 2.2e-35 155.6 1248 24.0
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 1.1e-34 153.3 1388 24.8
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 3.1e-34 151.8 1213 23.7
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 4.5e-33 147.9 1373 23.8
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 1.7e-32 146.0 640 27.3
Nn2g12985 Nelumbo nucifera HOM05D006507 ORTHO05D007296 2.9e-32 145.2 640 27.5
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 1.1e-31 143.3 1281 24.4
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 1.5e-31 142.9 1362 23.6
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 1.9e-31 142.5 473 31.5
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 1.9e-31 142.5 1380 24.3
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 3.2e-31 141.7 1136 23.7
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 9.4e-31 140.2 1142 25.0
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 1.6e-30 139.4 1239 24.5
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 4.0e-29 134.8 1133 25.1
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 6.8e-29 134.0 1219 24.2
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 8.8e-29 133.7 792 25.6
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 8.8e-29 133.7 102 65.7
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 1.2e-28 133.3 1278 23.8
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 1.5e-28 132.9 528 30.1
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 1.5e-28 132.9 79 74.7
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 2.6e-28 132.1 1325 23.8
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 3.4e-28 131.7 1259 23.7
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 5.7e-28 131.0 1077 25.4
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 9.8e-28 130.2 1389 23.5
Dinv32808 Davidia involucrata HOM05D006507 ORTHO05D007296 2.8e-27 128.6 108 57.4
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 3.1e-26 125.2 1211 24.2
MD03G1109500 Malus domestica HOM05D006507 ORTHO05D007296 9.1e-26 123.6 138 50.0
Ciclev10027733m.g Citrus clementina HOM05D006507 ORTHO05D007296 1.2e-25 123.2 122 54.1
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 2.7e-25 122.1 126 51.6
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 3.5e-25 121.7 1228 22.8
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 4.5e-25 121.3 1354 23.3
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 1.0e-24 120.2 1233 23.7
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 1.0e-24 120.2 1186 23.5
Cpa.g.sc139.57 Carica papaya HOM05D006507 ORTHO05D007296 1.0e-24 120.2 78 67.9
Actinidia08403 Actinidia chinensis HOM05D006507 ORTHO05D007296 1.3e-24 119.8 70 78.6
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 2.9e-24 118.6 1327 23.3
vmacro03159 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 2.9e-24 118.6 160 45.6
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 6.6e-24 117.5 1186 23.3
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 6.6e-24 117.5 1341 23.5
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 8.6e-24 117.1 1102 24.0
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 1.5e-23 116.3 120 58.3
HanXRQChr06g0183281 Helianthus annuus HOM05D006507 ORTHO05D007296 1.5e-23 116.3 84 67.9
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 2.5e-23 115.5 290 33.4
HPP92_026984 Vanilla planifolia HOM05D006507 ORTHO05D007296 2.5e-23 115.5 111 53.2
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 3.3e-23 115.2 1051 24.0
RcHm_v2.0_Chr5g0061361 Rosa chinensis HOM05D006507 ORTHO05D007296 3.3e-23 115.2 93 59.1
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 3.3e-23 115.2 1295 23.5
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 4.2e-23 114.8 115 51.3
HPP92_015411 Vanilla planifolia HOM05D006507 ORTHO05D007296 4.2e-23 114.8 111 53.2
FvH4_3g33790 Fragaria vesca HOM05D006507 ORTHO05D007296 5.5e-23 114.4 443 29.6
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 4.7e-22 111.3 122 52.5
Solyc06g075420.1 Solanum lycopersicum HOM05D006507 ORTHO05D007296 8.0e-22 110.5 122 53.3
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 8.0e-22 110.5 1206 23.0
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 1.0e-21 110.2 96 59.4
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 1.4e-21 109.8 107 53.3
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 1.8e-21 109.4 1416 23.1
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 1.8e-21 109.4 94 57.4
VMungo1127G1622 Vigna mungo HOM05D006507 ORTHO05D007296 4.0e-21 108.2 269 33.1
CAN.G1001.2 Capsicum annuum HOM05D006507 ORTHO05D007296 6.8e-21 107.5 154 44.2
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 6.8e-21 107.5 1331 22.2
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 1.5e-20 106.3 1325 22.6
Lalb_Chr19g0137501 Lupinus albus HOM05D006507 ORTHO05D007296 2.0e-20 105.9 139 43.2
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 3.4e-20 105.1 1247 21.5
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.3e-19 103.2 1264 23.5
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 1.7e-19 102.8 433 29.3
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 2.2e-19 102.4 659 25.5
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 2.9e-19 102.1 1162 22.5
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 3.7e-19 101.7 430 29.1
Lj2A1039T65 Lonicera japonica HOM05D006507 ORTHO05D007296 3.7e-19 101.7 536 27.2
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 6.3e-19 100.9 478 28.7
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 8.3e-19 100.5 80 57.5
Psat7g223080 Pisum sativum HOM05D006507 ORTHO05D007296 2.4e-18 99.0 390 28.7
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 5.4e-18 97.8 451 27.5
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 1.2e-17 96.7 1032 22.7
CANSAT54G0008 Cannabis sativa HOM05D006507 ORTHO05D007296 2.7e-17 95.5 480 29.0
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 5.0e-16 91.3 1330 22.6
Migut.N02633 Erythranthe guttata HOM05D006507 ORTHO05D007296 5.0e-16 91.3 959 23.1
Actinidia07103 Actinidia chinensis HOM05D006507 ORTHO05D007296 1.5e-15 89.7 74 60.8
AUR62006495 Chenopodium quinoa HOM05D006507 ORTHO05D007296 5.6e-15 87.8 914 23.9
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 9.5e-15 87.0 1332 23.3
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 3.6e-14 85.1 1175 23.9
Hma1.2p1_0840F.1_g226520 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 1.4e-13 83.2 70 55.7
RcHm_v2.0_Chr5g0061351 Rosa chinensis HOM05D006507 ORTHO05D007296 4.0e-13 81.6 196 36.2
FAN21G2403 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.2e-12 80.1 462 27.7
Cpa.g.sc139.58 Carica papaya HOM05D006507 ORTHO05D007296 1.5e-12 79.7 173 35.8
Hma1.2p1_2156F.1_g315450 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 3.4e-12 78.6 79 54.4
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 5.8e-12 77.8 1030 22.6
AagrBONN_evm.TU.Sc2ySwM_368.2680 Anthoceros agrestis HOM05D006507 ORTHO05D007296 7.5e-12 77.4 58 60.3
AUR62025040 Chenopodium quinoa HOM05D006507 ORTHO05D007296 3.7e-11 75.1 804 22.9
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.7e-11 75.1 99 46.5
Pp3c16_7200 Physcomitrium patens HOM05D034648 ORTHO05D007296 1.1e-10 73.6 59 59.3
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 3.2e-10 72.0 96 43.8
Lalb_Chr19g0137491 Lupinus albus HOM05D006507 ORTHO05D007296 3.2e-10 72.0 201 34.3
CAN.G1001.3 Capsicum annuum HOM05D006507 ORTHO05D007296 4.1e-10 71.6 160 34.4
Sopen02g037950 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-09 70.1 167 33.5
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 2.7e-09 68.9 1141 21.9
Mapoly0001s0188 Marchantia polymorpha HOM05D006507 ORTHO05D007296 4.6e-09 68.2 64 56.2
vmacro03160 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 4.6e-09 68.2 76 47.4
HPP92_013898 Vanilla planifolia HOM05D003265 ORTHO05D003819 6.0e-09 67.8 79 46.8
HanXRQChr06g0183291 Helianthus annuus HOM05D006507 ORTHO05D007296 7.8e-09 67.4 83 43.4
Sopen02g037960 Solanum pennellii HOM05D006507 ORTHO05D007296 2.3e-08 65.9 92 46.7
Os11g0103100 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 3.9e-08 65.1 207 31.4
Solyc06g075410.4 Solanum lycopersicum HOM05D006507 ORTHO05D007296 5.0e-08 64.7 104 40.4
Migut.N02632 Erythranthe guttata HOM05D006507 ORTHO05D007296 1.1e-07 63.5 119 36.1
Psat7g223120 Pisum sativum HOM05D006507 ORTHO05D007296 4.3e-07 61.6 73 49.3
Hma1.2p1_0660F.1_g197490 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 9.5e-07 60.5 73 49.3
CDE04G2211 Ceratophyllum demersum HOM05D034970 ORTHO05D007296 1.2e-06 60.1 402 26.9


User provided reference genes

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