Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 0.0e+00 1091.6 567 100.0
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 3.9e-222 775.0 566 70.5
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 8.2e-220 767.3 568 70.1
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 1.7e-217 759.6 568 69.0
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 1.7e-217 759.6 568 69.2
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 3.0e-214 748.8 582 67.5
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 1.0e-206 723.8 573 66.5
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 1.1e-205 720.3 568 66.0
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 2.8e-204 715.7 573 65.8
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 2.4e-203 712.6 574 64.8
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 7.7e-202 707.6 568 65.0
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 1.0e-201 707.2 569 65.7
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 6.5e-201 704.5 569 66.3
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 8.5e-201 704.1 569 66.3
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 8.5e-201 704.1 571 64.8
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.5e-200 703.4 576 63.5
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.5e-200 703.4 576 63.7
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 1.5e-200 703.4 570 65.8
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 4.2e-200 701.8 573 64.4
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 5.5e-200 701.4 568 66.0
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 5.2e-198 694.9 580 63.4
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 5.2e-198 694.9 573 63.5
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 6.8e-198 694.5 568 63.6
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 2.0e-197 693.0 567 64.9
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 2.8e-196 689.1 570 63.5
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 8.3e-196 687.6 572 63.6
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 8.3e-196 687.6 568 63.9
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 1.1e-195 687.2 565 64.4
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 2.4e-195 686.0 577 64.0
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 7.0e-195 684.5 570 64.0
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 9.1e-195 684.1 569 64.3
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 2.0e-194 682.9 571 64.8
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.7e-194 682.6 575 64.0
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 1.0e-193 680.6 572 62.9
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 1.3e-193 680.2 577 63.4
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 5.0e-193 678.3 569 63.6
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 5.0e-193 678.3 569 63.6
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 1.9e-192 676.4 573 63.7
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 2.5e-192 676.0 568 64.4
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 2.5e-192 676.0 574 63.8
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 5.5e-192 674.9 573 62.1
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 2.3e-190 669.5 568 62.3
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 2.3e-190 669.5 574 61.8
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.3e-190 669.5 568 64.1
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 2.3e-190 669.5 571 63.2
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 3.0e-190 669.1 568 62.7
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 6.8e-190 667.9 566 62.9
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 2.8e-188 662.5 567 61.9
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 3.7e-188 662.1 570 62.3
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 5.4e-187 658.3 573 62.0
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 7.0e-187 657.9 561 63.8
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.2e-186 657.1 525 66.7
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 1.6e-186 656.8 571 61.3
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 2.7e-186 656.0 503 66.8
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 3.5e-186 655.6 574 61.5
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 5.9e-186 654.8 579 61.3
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 1.0e-185 654.1 608 59.9
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 1.0e-185 654.1 587 61.0
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 1.3e-185 653.7 568 60.2
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 1.3e-185 653.7 571 61.5
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 2.3e-185 652.9 569 60.1
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 8.6e-185 651.0 573 61.1
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 8.6e-185 651.0 570 62.5
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 1.9e-184 649.8 569 60.1
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 4.2e-184 648.7 569 59.9
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 7.2e-184 647.9 566 59.7
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 7.2e-184 647.9 566 59.7
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 9.5e-184 647.5 573 59.0
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 1.6e-183 646.7 568 59.5
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 1.6e-183 646.7 566 59.5
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 1.8e-182 643.3 568 58.8
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.8e-182 643.3 567 61.6
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 2.3e-182 642.9 594 57.6
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 4.0e-182 642.1 568 58.6
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 3.4e-181 639.0 569 59.2
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 7.5e-181 637.9 583 58.3
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 1.7e-180 636.7 505 66.5
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 2.2e-180 636.3 577 59.1
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 1.1e-179 634.0 504 65.5
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 7.0e-179 631.3 566 61.3
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 9.2e-179 630.9 569 58.7
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 2.9e-177 625.9 570 60.4
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 4.3e-176 622.1 568 58.3
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 2.1e-175 619.8 598 59.2
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 6.1e-175 618.2 571 59.7
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 1.0e-174 617.5 569 58.2
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 2.3e-174 616.3 569 59.2
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 3.7e-172 609.0 608 55.9
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 2.0e-170 603.2 471 67.1
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 2.3e-169 599.7 592 56.6
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 4.7e-167 592.0 651 53.3
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 8.0e-167 591.3 487 64.3
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 6.8e-166 588.2 478 65.1
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.7e-164 583.6 576 57.1
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 1.7e-164 583.6 515 62.9
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 5.6e-160 568.5 509 58.7
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 3.4e-157 559.3 568 56.3
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 1.3e-153 547.4 534 55.8
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 1.9e-152 543.5 569 55.0
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 4.3e-152 542.3 570 56.7
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 4.3e-152 542.3 486 60.7
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 5.4e-147 525.4 553 53.7
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 9.3e-147 524.6 572 51.6
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 6.4e-140 501.9 512 53.1
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 3.5e-138 496.1 340 72.4
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 2.8e-135 486.5 588 50.9
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 4.8e-135 485.7 354 69.5
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 6.2e-135 485.3 479 55.1
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 3.4e-133 479.6 354 69.5
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 2.4e-126 456.8 548 50.4
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 1.0e-124 451.4 413 59.3
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 1.3e-119 434.5 234 92.7
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 1.6e-119 434.1 489 51.9
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 3.7e-111 406.4 389 56.3
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 1.4e-110 404.4 242 82.2
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 1.4e-110 404.4 242 82.2
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 6.5e-108 395.6 240 83.3
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 1.1e-99 368.2 287 63.8
Cpa.g.sc1.24 Carica papaya HOM05D004776 ORTHO05D005777 6.7e-97 359.0 420 51.0
Hund01475 Selenicereus undatus HOM05D004776 ORTHO05D005777 4.8e-95 352.8 414 51.4
BcaNung05691 Brassica carinata HOM05D004776 ORTHO05D005777 1.3e-92 344.7 399 49.9
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 2.9e-92 343.6 419 49.4
MBI18_g20776_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.5e-91 340.5 374 53.2
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.6e-90 336.7 192 86.5
MD00G1033900 Malus domestica HOM05D004776 ORTHO05D005777 9.1e-86 322.0 398 50.0
Atru.chr3.3553 Acer truncatum HOM05D004776 ORTHO05D005777 1.7e-84 317.8 320 54.1
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 8.0e-82 308.9 580 36.9
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 2.2e-79 300.8 582 36.1
Actinidia03705 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.2e-76 290.8 335 50.1
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 6.5e-76 289.3 159 86.2
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 1.4e-62 245.0 143 83.2
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 4.1e-62 243.4 180 70.6
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 3.5e-61 240.4 467 37.3
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.0e-60 238.8 143 84.6
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.5e-59 234.2 143 82.5
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 6.8e-57 226.1 134 83.6
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.3e-55 221.9 128 86.7
Ca_01994_v3 Cicer arietinum L. HOM05D004776 ORTHO05D005777 2.4e-54 217.6 233 54.1
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-54 216.1 560 32.0
AagrBONN_evm.TU.Sc2ySwM_228.5408 Anthoceros agrestis HOM05D004776 ORTHO05D005777 1.2e-42 178.7 499 29.5
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.1e-35 155.6 88 86.4
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.8e-33 146.4 92 78.3
Os02g0142250 Oryza sativa ssp. japonica HOM05D004776 ORTHO05D005777 3.3e-27 127.5 181 44.2
Os02g0146500 Oryza sativa ssp. japonica HOM05D004776 ORTHO05D005777 3.6e-26 124.0 205 43.4
Gohir.A03G030950 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.8e-26 123.6 160 48.8
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 1.7e-23 115.2 256 35.5
FAN23G0725 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.4e-23 113.2 126 50.8
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 3.5e-21 107.5 132 47.0
MD00G1165500 Malus domestica HOM05D004776 ORTHO05D005777 4.3e-19 100.5 82 67.1
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 9.6e-19 99.4 255 27.8
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 3.1e-17 94.4 52 86.5
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 4.5e-16 90.5 258 29.5
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 2.2e-15 88.2 45 91.1


User provided reference genes

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