Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 2.9e-134 481.9 240 100.0
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 4.7e-15 85.9 62 66.1
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 4.7e-15 85.9 73 52.1
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 3.0e-14 83.2 62 58.1
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 1.1e-13 81.3 62 56.5
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.0e-13 80.5 62 51.6
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.6e-13 80.1 62 54.8
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 7.4e-13 78.6 62 56.5
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 7.4e-13 78.6 62 54.8
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.3e-12 77.8 62 54.8
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.2e-12 77.0 62 51.6
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 2.2e-12 77.0 62 54.8
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 4.8e-12 75.9 62 53.2
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 6.3e-12 75.5 62 53.2
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 8.2e-12 75.1 62 50.0
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.1e-11 74.7 62 51.6
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.4e-11 74.3 62 51.6
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.4e-11 73.6 62 53.2
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.4e-11 73.6 62 50.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-11 73.6 62 51.6
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-11 73.6 62 51.6
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.4e-11 73.6 62 48.4
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.1e-11 73.2 62 50.0
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 4.1e-11 72.8 62 53.2
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 5.3e-11 72.4 62 51.6
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 6.9e-11 72.0 62 48.4
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 9.1e-11 71.6 62 50.0
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.2e-10 71.2 62 45.2
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.2e-10 71.2 62 51.6
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.0e-10 70.5 62 48.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.6e-10 70.1 62 50.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.6e-10 70.1 62 48.4
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.6e-10 70.1 62 51.6
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.5e-10 69.3 63 49.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.5e-10 69.3 63 49.2
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.5e-10 69.3 63 49.2
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 4.5e-10 69.3 62 48.4
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 5.9e-10 68.9 62 51.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 7.7e-10 68.6 62 51.6
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 7.7e-10 68.6 62 48.4
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-09 68.2 63 46.0
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.0e-09 68.2 62 50.0
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.0e-09 68.2 67 49.3
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.3e-09 67.8 62 46.8
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.3e-09 67.8 62 45.2
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.3e-09 67.8 62 45.2
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-09 67.4 63 50.8
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.7e-09 67.4 62 48.4
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.2e-09 67.0 63 50.8
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 2.9e-09 66.6 63 46.0
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.9e-09 66.6 63 46.0
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.9e-09 66.6 63 46.0
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 3.8e-09 66.2 62 45.2
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.8e-09 66.2 62 50.0
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 5.0e-09 65.9 62 46.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.0e-09 65.9 64 45.3
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 6.5e-09 65.5 62 48.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 8.5e-09 65.1 63 50.8
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-08 64.7 65 44.6
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-08 64.7 65 47.7
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.4e-08 64.3 62 43.5
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.4e-08 64.3 63 46.0
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 2.5e-08 63.5 62 46.8
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.5e-08 63.5 63 46.0
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.2e-08 63.2 62 46.8
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 3.2e-08 63.2 62 46.8
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.2e-08 62.0 62 50.0
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.2e-08 62.0 62 50.0
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 7.2e-08 62.0 63 44.4
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.2e-08 62.0 63 44.4
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 9.4e-08 61.6 62 50.0
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 9.4e-08 61.6 62 43.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.6e-07 60.8 62 46.8
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 2.1e-07 60.5 62 45.2
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.7e-07 60.1 63 47.6
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.7e-07 60.1 62 46.8
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.7e-07 60.1 62 41.9
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 3.6e-07 59.7 62 45.2
Aqoxy5G03062 Aquilegia oxysepala HOM05D001042 ORTHO05D006654 4.7e-07 59.3 46 63.0
Aqoxy7G02730 Aquilegia oxysepala HOM05D001042 ORTHO05D006654 4.7e-07 59.3 46 63.0
Aqoxy7G02970 Aquilegia oxysepala HOM05D001042 ORTHO05D006654 4.7e-07 59.3 46 63.0
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 4.7e-07 59.3 62 45.2
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 6.1e-07 58.9 62 45.2
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 6.1e-07 58.9 62 41.9
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 8.0e-07 58.5 65 44.6
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 1.0e-06 58.2 62 41.9
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.4e-06 57.8 65 49.2
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.8e-06 57.4 65 49.2
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.3e-06 57.0 62 43.5
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 3.0e-06 56.6 62 40.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.0e-06 56.6 61 47.5
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 3.9e-06 56.2 38 57.9
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.2e-06 55.8 62 40.3
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 6.7e-06 55.5 62 43.5
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 6.7e-06 55.5 71 40.8


User provided reference genes

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