Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 7.0e-94 347.8 257 100.0
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.6e-93 345.1 169 99.4
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.5e-77 292.4 169 82.8
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 6.0e-77 291.6 168 81.0
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 6.0e-77 291.6 167 81.4
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 2.3e-76 289.7 168 80.4
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 2.3e-76 289.7 169 80.5
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 3.9e-76 288.9 169 81.7
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 3.9e-76 288.9 162 84.6
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 8.6e-76 287.7 169 79.9
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 1.9e-75 286.6 169 81.1
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.9e-75 286.6 169 80.5
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 3.3e-75 285.8 168 81.0
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 4.3e-75 285.4 168 81.5
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 5.6e-75 285.0 168 78.6
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 7.3e-75 284.6 168 79.2
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.2e-74 283.9 168 78.0
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.6e-74 283.5 166 82.5
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 3.6e-74 282.3 164 82.9
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.7e-74 282.0 166 78.3
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 4.7e-74 282.0 168 81.0
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 6.2e-74 281.6 165 80.6
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 6.2e-74 281.6 168 78.6
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 8.1e-74 281.2 165 80.0
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.1e-73 280.8 168 79.2
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.4e-73 280.4 165 79.4
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.4e-73 280.4 168 78.6
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 1.4e-73 280.4 166 81.3
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.8e-73 280.0 168 80.4
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.8e-73 280.0 168 80.4
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 1.8e-73 280.0 167 79.6
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 3.1e-73 279.3 169 78.1
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 4.0e-73 278.9 165 80.0
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 5.2e-73 278.5 165 78.2
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 5.2e-73 278.5 168 77.4
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 6.8e-73 278.1 169 78.1
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.2e-72 277.3 168 77.4
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.5e-72 276.9 169 78.7
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 1.5e-72 276.9 168 79.2
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 2.6e-72 276.2 168 78.6
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 4.4e-72 275.4 170 78.2
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 4.4e-72 275.4 166 80.1
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.4e-72 275.4 165 80.6
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 4.4e-72 275.4 166 80.7
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 9.9e-72 274.2 165 78.8
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 2.2e-71 273.1 168 76.8
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 2.9e-71 272.7 170 78.2
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 4.9e-71 271.9 170 78.2
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.1e-70 270.8 163 78.5
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.4e-70 270.4 169 76.3
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 1.4e-70 270.4 165 77.0
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 2.4e-70 269.6 221 63.3
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 3.2e-70 269.2 165 75.8
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 4.1e-70 268.9 174 77.6
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 7.1e-70 268.1 165 78.2
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 7.1e-70 268.1 169 76.3
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 2.1e-69 266.5 166 77.1
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 6.0e-69 265.0 169 74.6
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.0e-68 264.2 169 75.1
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 2.3e-68 263.1 165 75.2
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 6.6e-68 261.5 164 75.0
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 8.6e-68 261.2 169 75.7
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 1.1e-67 260.8 165 74.5
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.5e-67 260.4 167 74.9
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.9e-67 260.0 167 74.3
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.5e-67 259.6 169 73.4
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.6e-67 258.5 167 74.9
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.2e-66 257.3 183 69.4
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.6e-66 256.9 167 73.7
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 1.6e-66 256.9 166 72.3
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 6.2e-66 255.0 163 73.0
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 8.1e-66 254.6 165 73.3
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 5.2e-65 251.9 165 70.9
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 8.9e-65 251.1 167 73.1
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.2e-64 250.8 205 63.9
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 3.4e-64 249.2 162 72.8
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 2.2e-63 246.5 166 71.1
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 6.4e-63 245.0 139 81.3
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.0e-60 237.7 139 77.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 1.0e-60 237.7 147 78.2
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.7e-60 236.9 140 80.7
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.7e-60 236.9 203 59.6
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 3.9e-60 235.7 141 80.1
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 1.3e-58 230.7 144 75.7
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 3.6e-58 229.2 140 80.7
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 5.3e-57 225.3 242 51.2
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 2.2e-55 219.9 148 70.3
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.6e-53 213.8 139 73.4
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 3.0e-52 209.5 136 74.3
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 3.7e-50 202.6 122 77.0
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.0e-48 196.8 122 73.8
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 2.1e-45 186.8 123 71.5
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 2.1e-45 186.8 123 72.4
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 1.8e-41 173.7 217 45.6
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.3e-39 167.5 168 46.4
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.0e-36 157.9 180 46.1
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.9e-30 137.1 77 83.1
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 4.8e-26 122.5 74 75.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.1e-17 94.7 124 37.9
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.4e-11 72.0 87 54.0
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 5.5e-06 55.8 48 58.3
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 7.2e-06 55.5 30 86.7


User provided reference genes

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