Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 8.9e-118 427.2 251 100.0
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 7.4e-64 248.1 253 63.2
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 9.7e-64 247.7 255 57.3
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 2.4e-62 243.0 253 65.2
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 4.5e-61 238.8 253 53.4
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 5.9e-61 238.4 246 55.7
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 2.9e-60 236.1 253 57.3
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 1.4e-59 233.8 245 53.1
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 1.2e-58 230.7 253 51.0
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 1.2e-58 230.7 254 52.8
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 1.6e-58 230.3 240 52.9
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 2.1e-58 229.9 233 54.1
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 2.1e-58 229.9 242 52.1
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 7.9e-58 228.0 241 55.6
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.8e-57 226.9 230 53.0
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 6.7e-57 224.9 255 51.8
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 6.7e-57 224.9 252 50.4
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 6.7e-57 224.9 240 52.9
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 6.7e-57 224.9 250 55.2
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 1.5e-56 223.8 249 48.6
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 1.5e-56 223.8 249 48.6
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 2.0e-56 223.4 230 53.0
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 3.3e-56 222.6 247 49.8
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 4.3e-56 222.2 253 60.5
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 4.3e-56 222.2 258 48.8
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 5.7e-56 221.9 249 49.8
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 7.4e-56 221.5 254 48.8
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 7.4e-56 221.5 232 50.9
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 9.7e-56 221.1 247 49.8
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 9.7e-56 221.1 254 50.4
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 1.7e-55 220.3 255 49.0
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 2.2e-55 219.9 237 48.1
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 2.8e-55 219.5 233 58.8
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 2.8e-55 219.5 238 48.3
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 2.8e-55 219.5 247 51.8
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 4.8e-55 218.8 256 49.2
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 4.8e-55 218.8 199 58.8
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 4.8e-55 218.8 241 49.0
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 4.8e-55 218.8 234 59.4
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 6.3e-55 218.4 251 50.2
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 8.2e-55 218.0 233 52.8
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 8.2e-55 218.0 260 47.3
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 8.2e-55 218.0 250 52.0
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 8.2e-55 218.0 252 46.8
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 8.2e-55 218.0 237 49.8
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 1.1e-54 217.6 245 51.4
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.4e-54 217.2 233 60.1
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.4e-54 217.2 235 50.6
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.4e-54 217.2 244 48.8
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 2.4e-54 216.5 257 51.8
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 2.4e-54 216.5 234 53.0
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 4.1e-54 215.7 200 55.0
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 9.1e-54 214.5 230 48.7
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 1.2e-53 214.2 236 53.0
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 1.5e-53 213.8 228 49.1
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 2.6e-53 213.0 251 48.2
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 4.5e-53 212.2 252 49.6
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 4.5e-53 212.2 250 45.6
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 5.9e-53 211.8 230 48.3
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 1.3e-52 210.7 191 56.5
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.2e-52 209.9 256 48.0
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 3.8e-52 209.1 250 53.2
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 5.0e-52 208.8 200 56.0
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.0e-52 208.8 250 49.2
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.5e-52 208.4 250 46.4
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 8.5e-52 208.0 250 57.2
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 8.5e-52 208.0 194 56.7
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 8.5e-52 208.0 212 51.9
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 8.5e-52 208.0 212 51.9
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 1.1e-51 207.6 249 53.0
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.1e-51 207.6 250 48.8
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 1.1e-51 207.6 248 54.4
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 1.1e-51 207.6 250 53.6
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 1.9e-51 206.8 250 49.2
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.5e-51 206.5 201 53.2
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 2.5e-51 206.5 249 48.2
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.5e-51 206.5 250 48.8
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 7.2e-51 204.9 250 44.8
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 9.4e-51 204.5 252 47.2
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 2.1e-50 203.4 243 49.0
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 2.3e-49 199.9 248 51.2
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.5e-48 197.2 252 46.4
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 2.6e-48 196.4 233 46.4
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 4.4e-48 195.7 194 53.1
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 7.4e-48 194.9 244 47.1
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 9.7e-48 194.5 244 47.1
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 2.4e-46 189.9 221 45.7
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 3.1e-46 189.5 242 52.9
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 5.9e-45 185.3 132 66.7
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.5e-43 180.6 223 51.1
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 9.4e-43 177.9 256 47.7
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.6e-40 169.9 238 41.6
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 2.8e-39 166.4 234 39.7
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.5e-37 159.1 125 67.2
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 5.9e-37 158.7 197 44.7
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 7.7e-37 158.3 202 43.1
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 1.0e-36 157.9 197 46.7
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 1.1e-35 154.5 249 42.2
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 1.5e-35 154.1 197 43.1
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 4.1e-22 109.4 231 42.9
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 4.1e-22 109.4 231 42.9
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 8.6e-20 101.7 164 43.3
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 8.6e-20 101.7 164 43.3
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 1.1e-19 101.3 164 43.3
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 1.3e-15 87.8 131 57.3
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 6.4e-15 85.5 133 48.9
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 1.4e-14 84.3 142 54.2
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 4.1e-14 82.8 111 42.3
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 7.0e-14 82.0 134 46.3
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 7.0e-14 82.0 130 37.7
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 7.0e-14 82.0 135 48.9
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 3.5e-13 79.7 131 39.7
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 4.6e-13 79.3 128 42.2
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 4.6e-13 79.3 128 38.3
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 4.6e-13 79.3 127 46.5
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 7.8e-13 78.6 154 33.8
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 7.8e-13 78.6 145 37.2
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 3.0e-12 76.6 128 47.7
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 8.6e-12 75.1 145 35.2
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 1.9e-11 73.9 131 40.5
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.9e-11 73.9 130 40.8
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 7.3e-11 72.0 60 56.7
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 1.6e-10 70.9 105 38.1
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 1.5e-08 64.3 123 41.5


User provided reference genes

Program Settings