Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 8.1e-73 276.9 137 100.0
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 2.8e-17 92.4 129 40.3
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 2.7e-15 85.9 135 34.8
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 3.5e-15 85.5 135 34.8
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 2.9e-14 82.4 135 37.0
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.5e-14 81.3 130 36.9
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.5e-14 81.3 135 36.3
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 8.5e-14 80.9 135 34.1
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 8.5e-14 80.9 142 39.4
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.1e-13 80.5 134 37.3
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.5e-13 80.1 143 39.9
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.9e-13 79.7 150 38.0
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.9e-13 79.7 135 35.6
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 2.5e-13 79.3 75 50.7
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 3.2e-13 79.0 136 37.5
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 5.5e-13 78.2 136 36.8
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 7.2e-13 77.8 136 36.0
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 7.2e-13 77.8 116 36.2
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 9.4e-13 77.4 130 37.7
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 2.1e-12 76.3 124 35.5
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.7e-12 75.9 137 38.7
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 2.7e-12 75.9 139 36.0
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 3.6e-12 75.5 145 34.5
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 8.0e-12 74.3 128 37.5
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 1.4e-11 73.6 141 34.8
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 1.8e-11 73.2 135 36.3
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 2.3e-11 72.8 120 36.7
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 3.0e-11 72.4 115 36.5
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 4.0e-11 72.0 137 37.2
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 4.0e-11 72.0 115 36.5
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 4.0e-11 72.0 130 36.2
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 6.8e-11 71.2 136 37.5
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 8.8e-11 70.9 130 36.2
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 8.8e-11 70.9 125 32.8
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 8.8e-11 70.9 134 33.6
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 1.2e-10 70.5 115 37.4
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 1.5e-10 70.1 139 33.1
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 2.0e-10 69.7 132 32.6
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 2.0e-10 69.7 145 33.1
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 3.4e-10 68.9 79 44.3
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 4.4e-10 68.6 147 32.7
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 7.5e-10 67.8 131 34.4
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 7.5e-10 67.8 130 31.5
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 9.8e-10 67.4 154 35.1
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.3e-09 67.0 124 34.7
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 1.7e-09 66.6 143 29.4
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 2.2e-09 66.2 103 41.7
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 2.8e-09 65.9 136 39.7
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 3.7e-09 65.5 87 42.5
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 3.7e-09 65.5 87 42.5
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 3.7e-09 65.5 116 37.9
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 3.7e-09 65.5 139 30.9
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 3.7e-09 65.5 141 33.3
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 4.8e-09 65.1 138 32.6
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 1.1e-08 63.9 76 42.1
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.1e-08 63.9 76 42.1
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.1e-08 63.9 76 42.1
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 2.4e-08 62.8 128 32.8
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 2.4e-08 62.8 136 35.3
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 3.1e-08 62.4 144 33.3
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 3.1e-08 62.4 157 34.4
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 3.1e-08 62.4 134 34.3
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 7.0e-08 61.2 164 28.7
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 9.1e-08 60.8 131 30.5
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 9.1e-08 60.8 124 34.7
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 9.1e-08 60.8 126 36.5
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 1.2e-07 60.5 112 35.7
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 1.2e-07 60.5 120 33.3
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.2e-07 60.5 122 32.0
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 1.2e-07 60.5 77 40.3
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 2.7e-07 59.3 140 31.4
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 3.5e-07 58.9 138 34.1
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 4.5e-07 58.5 72 43.1
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 1.0e-06 57.4 108 35.2
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.0e-06 57.4 108 36.1
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 1.3e-06 57.0 109 36.7
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 1.3e-06 57.0 102 34.3
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.7e-06 56.6 63 42.9
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 2.3e-06 56.2 63 42.9
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 2.9e-06 55.8 139 32.4
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 3.8e-06 55.5 52 40.4
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 5.0e-06 55.1 140 34.3
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 5.0e-06 55.1 127 31.5
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 6.6e-06 54.7 125 33.6


User provided reference genes

Program Settings