Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 4.3e-42 174.1 80 100.0
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.4e-27 125.9 78 74.4
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.4e-27 125.9 77 72.7
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.4e-27 125.9 78 73.1
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 8.8e-27 123.2 78 71.8
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 5.7e-26 120.6 78 71.8
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 7.4e-26 120.2 75 72.0
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 7.4e-26 120.2 78 71.8
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 7.4e-26 120.2 78 71.8
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 9.7e-26 119.8 78 71.8
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 9.7e-26 119.8 78 70.5
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.3e-25 119.4 78 70.5
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.3e-25 119.4 71 73.2
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.2e-25 118.6 78 67.9
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 2.2e-25 118.6 78 71.8
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 2.2e-25 118.6 80 67.5
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 2.2e-25 118.6 78 71.8
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 2.8e-25 118.2 78 67.9
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 3.7e-25 117.9 78 67.9
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 6.3e-25 117.1 78 67.9
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 8.2e-25 116.7 78 67.9
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 8.2e-25 116.7 69 73.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 8.2e-25 116.7 78 67.9
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.1e-24 116.3 69 72.5
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.1e-24 116.3 78 69.2
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 1.4e-24 115.9 78 69.2
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.4e-24 115.9 71 71.8
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 2.4e-24 115.2 77 66.2
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.1e-24 114.8 78 66.7
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 3.1e-24 114.8 71 70.4
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 3.1e-24 114.8 78 66.7
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 5.3e-24 114.0 71 73.2
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.3e-24 114.0 67 76.1
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 6.9e-24 113.6 78 67.9
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 6.9e-24 113.6 71 70.4
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 6.9e-24 113.6 79 68.4
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.2e-23 112.8 71 70.4
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.2e-23 112.8 78 66.7
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 1.2e-23 112.8 71 71.8
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 1.2e-23 112.8 78 67.9
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.2e-23 112.8 67 76.1
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.2e-23 112.8 71 73.2
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.2e-23 112.8 69 72.5
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 2.0e-23 112.1 78 64.1
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 2.6e-23 111.7 78 65.4
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 3.4e-23 111.3 78 67.9
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 4.5e-23 110.9 78 64.1
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 5.9e-23 110.5 72 66.7
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 5.9e-23 110.5 69 71.0
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 5.9e-23 110.5 78 64.1
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 1.0e-22 109.8 71 69.0
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.7e-22 109.0 73 67.1
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.2e-22 108.6 69 68.1
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.2e-22 108.6 69 71.0
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 2.9e-22 108.2 71 70.4
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 3.8e-22 107.8 71 67.6
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 3.8e-22 107.8 78 62.8
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 5.0e-22 107.5 78 62.8
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 6.5e-22 107.1 77 63.6
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 6.5e-22 107.1 71 69.0
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 8.5e-22 106.7 69 69.6
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-21 106.3 71 67.6
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-21 106.3 71 67.6
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-21 106.3 71 67.6
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-21 106.3 71 67.6
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.1e-21 106.3 71 67.6
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.4e-21 105.9 67 70.1
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.9e-21 105.5 79 63.3
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.9e-21 105.5 78 64.1
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.9e-21 105.5 81 66.7
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.5e-21 105.1 78 64.1
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 4.2e-21 104.4 71 66.2
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 4.2e-21 104.4 71 66.2
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.5e-21 104.0 71 64.8
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 7.2e-21 103.6 69 66.7
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 9.4e-21 103.2 81 64.2
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 1.6e-20 102.4 79 60.8
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 2.1e-20 102.1 78 61.5
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.7e-20 101.7 71 64.8
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.7e-20 101.7 66 63.6
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.7e-20 101.7 66 63.6
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 3.6e-20 101.3 66 66.7
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 3.6e-20 101.3 66 66.7
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 6.1e-20 100.5 76 63.2
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-19 99.4 67 67.2
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-19 99.4 68 66.2
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.9e-19 97.8 71 62.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 5.1e-19 97.4 72 62.5
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 6.7e-19 97.1 67 64.2
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.5e-18 95.9 78 59.0
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 2.0e-18 95.5 72 61.1
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 5.7e-18 94.0 71 59.2
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.3e-17 92.8 71 56.3
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.7e-17 92.4 71 57.7
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.7e-17 92.4 66 62.1
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 3.7e-17 91.3 73 56.2
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 6.3e-17 90.5 73 57.5
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 6.3e-17 90.5 78 53.8
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.1e-16 89.7 73 54.8
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.4e-16 89.4 73 56.2
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.4e-16 89.4 73 54.8
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 2.4e-16 88.6 73 56.2
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 2.4e-16 88.6 73 56.2
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 3.1e-16 88.2 73 53.4
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.1e-16 88.2 73 54.8
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 3.1e-16 88.2 73 53.4
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 4.1e-16 87.8 74 52.7
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 4.1e-16 87.8 73 54.8
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 4.1e-16 87.8 73 56.2
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 5.3e-16 87.4 73 56.2
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 7.0e-16 87.0 73 53.4
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 9.1e-16 86.7 73 53.4
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 7.7e-15 83.6 73 52.1
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 6.5e-14 80.5 73 50.7
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 8.5e-14 80.1 71 46.5
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 1.9e-13 79.0 40 87.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 9.4e-13 76.6 71 45.1
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.3e-11 72.0 42 73.8
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 2.3e-11 72.0 61 54.1
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.1e-10 69.7 41 73.2
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 3.7e-09 64.7 40 67.5
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 7.0e-08 60.5 48 58.3
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 9.1e-08 60.1 75 37.3
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 9.1e-08 60.1 68 39.7
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 5.0e-06 54.3 73 37.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 6.5e-06 53.9 39 61.5


User provided reference genes

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