Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 1.1e-70 270.0 145 100.0
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 4.3e-32 141.7 146 61.0
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 3.2e-27 125.6 148 51.4
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 1.1e-24 117.1 112 60.7
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 1.5e-24 116.7 152 52.0
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 1.6e-23 113.2 151 48.3
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 3.7e-23 112.1 152 49.3
PSO384G1244 Papaver somniferum HOM05D007680 ORTHO05D009702 6.2e-23 111.3 146 50.0
CDE02G0611 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 1.1e-22 110.5 147 49.7
CDE08G1572 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 1.8e-22 109.8 100 63.0
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 7.6e-21 104.4 165 49.7
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 1.0e-20 104.0 71 76.1
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 1.3e-20 103.6 144 50.7
Cfa011226 Carpinus fangiana HOM05D007680 ORTHO05D009702 2.9e-20 102.4 150 49.3
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 4.9e-20 101.7 163 47.2
COL.COLO4_33896 Corchorus olitorius HOM05D007680 ORTHO05D009702 8.4e-20 100.9 156 47.4
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 8.4e-20 100.9 156 44.2
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 8.4e-20 100.9 70 74.3
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 1.1e-19 100.5 129 51.2
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 1.4e-19 100.1 110 52.7
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 1.4e-19 100.1 159 45.3
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 1.9e-19 99.8 151 48.3
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 1.9e-19 99.8 152 46.7
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 2.5e-19 99.4 89 61.8
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 5.5e-19 98.2 80 68.8
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 7.1e-19 97.8 72 68.1
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 7.1e-19 97.8 77 70.1
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 9.3e-19 97.4 152 47.4
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 1.6e-18 96.7 149 47.0
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 2.1e-18 96.3 84 66.7
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 2.7e-18 95.9 86 66.3
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 2.7e-18 95.9 73 68.5
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 2.7e-18 95.9 88 60.2
Lalb_Chr19g0129271 Lupinus albus HOM05D007680 ORTHO05D009702 3.5e-18 95.5 71 71.8
arahy.Tifrunner.gnm1.ann1.VK4BH4 Arachis hypogaea HOM05D007680 ORTHO05D009702 4.6e-18 95.1 71 67.6
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 6.0e-18 94.7 83 62.7
Thhalv10026523m.g Eutrema salsugineum HOM05D007680 ORTHO05D009702 6.0e-18 94.7 102 58.8
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 6.0e-18 94.7 147 46.9
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 6.0e-18 94.7 159 44.0
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 6.0e-18 94.7 159 44.0
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 7.9e-18 94.4 149 47.0
AT4G40045 Arabidopsis thaliana HOM05D007680 ORTHO05D009702 1.0e-17 94.0 118 55.9
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 1.0e-17 94.0 86 64.0
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 1.0e-17 94.0 140 51.4
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 1.0e-17 94.0 155 47.1
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.3e-17 93.6 163 44.8
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 2.3e-17 92.8 147 42.9
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 2.3e-17 92.8 147 46.3
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 3.0e-17 92.4 147 46.9
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 3.9e-17 92.0 140 45.7
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 3.9e-17 92.0 149 47.7
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 5.1e-17 91.7 69 73.9
CARHR246610 Cardamine hirsuta HOM05D007680 ORTHO05D009702 5.1e-17 91.7 93 62.4
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 6.7e-17 91.3 140 48.6
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 8.7e-17 90.9 162 43.2
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 8.7e-17 90.9 151 45.7
TWI38G2267 Tripterygium wilfordii HOM05D007680 ORTHO05D009702 8.7e-17 90.9 70 70.0
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 1.1e-16 90.5 74 70.3
AL7G12370 Arabidopsis lyrata HOM05D007680 ORTHO05D009702 1.5e-16 90.1 79 69.6
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 1.5e-16 90.1 73 69.9
Medtr1g050700 Medicago truncatula HOM05D007680 ORTHO05D009702 1.5e-16 90.1 92 56.5
Carub.0007s0203 Capsella rubella HOM05D007680 ORTHO05D009702 1.9e-16 89.7 141 46.1
Cpa.g.sc128.47 Carica papaya HOM05D007680 ORTHO05D009702 1.9e-16 89.7 164 43.3
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 2.5e-16 89.4 168 42.9
A01p00970 Brassica napus HOM05D007680 ORTHO05D009702 4.3e-16 88.6 142 45.1
BraA01t00095Z Brassica rapa HOM05D007680 ORTHO05D009702 4.3e-16 88.6 142 45.1
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 5.7e-16 88.2 114 46.5
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 7.4e-16 87.8 162 42.6
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 2.2e-15 86.3 63 74.6
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 2.2e-15 86.3 63 74.6
C01p01090 Brassica napus HOM05D007680 ORTHO05D009702 2.8e-15 85.9 72 70.8
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 4.8e-15 85.1 98 56.1
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 4.8e-15 85.1 98 56.1
BolC1t00107H Brassica oleracea HOM05D007680 ORTHO05D009702 6.3e-15 84.7 72 69.4
SEGI_03872 Sequoiadendron giganteum HOM05D007680 ORTHO05D009702 1.1e-14 84.0 71 63.4
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 2.4e-14 82.8 95 56.8
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 3.1e-14 82.4 60 66.7
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 4.1e-14 82.0 67 64.2
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.0e-13 79.7 94 50.0
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 5.9e-13 78.2 119 42.9
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 1.4e-11 73.6 75 52.0
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 2.5e-11 72.8 97 53.6
Glyma.10G104651 Glycine max HOM05D007680 ORTHO05D009702 4.2e-11 72.0 69 52.2
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 4.2e-11 72.0 95 45.3
arahy.Tifrunner.gnm1.ann1.UIS3VC Arachis hypogaea HOM05D007680 ORTHO05D009702 2.7e-10 69.3 81 46.9
Os12g0206700 Oryza sativa ssp. japonica HOM05D007680 ORTHO05D009702 7.4e-08 61.2 62 58.1
Zm00001eb411120 Zea mays HOM05D007680 ORTHO05D009702 9.7e-08 60.8 101 40.6
MBI17_g15050_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 1.3e-07 60.5 102 40.2
Zm00001eb004510 Zea mays HOM05D007680 ORTHO05D009702 8.2e-07 57.8 60 60.0


User provided reference genes

Program Settings