Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01348 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 9.7e-106 387.1 239 100.0
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 2.3e-46 189.9 100 94.0
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 1.4e-32 144.1 113 59.3
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 7.9e-31 138.3 109 62.4
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 8.7e-30 134.8 113 54.9
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 1.9e-29 133.7 108 60.2
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 5.6e-29 132.1 108 60.2
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 2.8e-28 129.8 113 51.3
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 3.7e-28 129.4 113 56.6
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 1.4e-27 127.5 113 53.1
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 2.4e-27 126.7 113 52.2
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 5.3e-27 125.6 113 49.6
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 5.3e-27 125.6 113 56.6
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 3.4e-26 122.9 105 56.2
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 1.3e-25 120.9 113 47.8
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 2.2e-25 120.2 113 52.2
CDE04G3021 Ceratophyllum demersum HOM05D007763 ORTHO05D000003 2.9e-25 119.8 113 49.6
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 4.2e-24 115.9 113 43.4
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 9.3e-24 114.8 113 43.4
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 2.1e-23 113.6 113 49.6
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 2.1e-23 113.6 113 51.3
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 2.1e-23 113.6 113 43.4
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 2.1e-23 113.6 105 52.4
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 6.7e-22 108.6 105 50.5
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 1.1e-21 107.8 110 48.2
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 1.9e-21 107.1 113 47.8
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 9.6e-21 104.8 96 52.1
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.1e-20 103.6 70 75.7
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 2.1e-20 103.6 97 52.6
MBI02_g14230_MAGBIO Magnolia biondii HOM05D007763 ORTHO05D011706 1.4e-19 100.9 112 45.5
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 3.1e-19 99.8 113 42.5
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 3.1e-19 99.8 113 42.5
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 3.1e-19 99.8 113 42.5
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 6.9e-19 98.6 113 42.5
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 6.9e-19 98.6 114 45.6
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 1.5e-18 97.4 113 42.5
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 3.4e-18 96.3 108 42.6
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 1.0e-17 94.7 85 51.8
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 1.0e-17 94.7 109 45.9
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 1.0e-17 94.7 109 45.9
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 1.3e-17 94.4 109 45.9
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 6.5e-17 92.0 113 39.8
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 6.5e-17 92.0 114 41.2
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 8.4e-17 91.7 99 49.5
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 8.4e-17 91.7 108 39.8
BcaC04g23452 Brassica carinata HOM05D007763 ORTHO05D009537 1.9e-16 90.5 105 44.8
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 1.9e-16 90.5 112 42.9
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 2.5e-16 90.1 112 40.2
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 4.2e-16 89.4 109 44.0
Hund02629 Selenicereus undatus HOM05D007763 ORTHO05D019789 5.5e-16 89.0 66 59.1
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 7.1e-16 88.6 98 46.9
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 9.3e-16 88.2 113 38.9
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 9.3e-16 88.2 98 46.9
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 9.3e-16 88.2 98 46.9
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 1.2e-15 87.8 109 44.0
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 2.7e-15 86.7 112 40.2
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 3.5e-15 86.3 112 40.2
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 4.6e-15 85.9 114 37.7
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 6.0e-15 85.5 74 51.4
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 6.0e-15 85.5 99 46.5
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 1.0e-14 84.7 105 40.0
CsaV3_5G025970 Cucumis sativus L. HOM05D007763 ORTHO05D009537 1.0e-14 84.7 113 38.1
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 1.0e-14 84.7 97 42.3
AT5G61400 Arabidopsis thaliana HOM05D007763 ORTHO05D009537 1.3e-14 84.3 112 39.3
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 3.0e-14 83.2 112 37.5
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 5.1e-14 82.4 109 39.4
Zm00001eb312410 Zea mays HOM05D007763 ORTHO05D009537 5.1e-14 82.4 73 52.1
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 8.7e-14 81.6 112 39.3
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 4.3e-13 79.3 109 37.6
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 9.7e-13 78.2 81 38.3
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 1.6e-12 77.4 79 46.8
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 2.2e-12 77.0 79 46.8
TPR.G11825 Trifolium pratense HOM05D007763 ORTHO05D009537 3.7e-12 76.3 104 35.6
Os09g0417500 Oryza sativa ssp. japonica HOM05D007763 ORTHO05D009537 3.1e-11 73.2 73 47.9
SEGI_07640 Sequoiadendron giganteum HOM05D007763 ORTHO05D009537 4.1e-11 72.8 108 38.0
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 5.3e-11 72.4 69 46.4
ATR1127G168 Amborella trichopoda HOM05D007763 ORTHO05D009537 9.0e-11 71.6 100 39.0
ATR1127G165 Amborella trichopoda HOM05D007763 ORTHO05D009537 1.7e-09 67.4 54 51.9
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 3.2e-08 63.2 116 31.9
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 4.2e-08 62.8 85 38.8
Aa31LG9G1210 Aethionema arabicum HOM05D007358 ORTHO05D009117 7.2e-08 62.0 88 34.1
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.2e-07 61.2 51 49.0
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 1.6e-07 60.8 78 37.2
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.7e-07 60.1 83 41.0
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 3.6e-07 59.7 94 29.8
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 3.6e-07 59.7 114 31.6
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 3.6e-07 59.7 114 31.6
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 4.6e-07 59.3 116 28.4
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 4.6e-07 59.3 116 30.2
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 4.6e-07 59.3 84 34.5
CsaV3_5G027190 Cucumis sativus L. HOM05D007358 ORTHO05D009117 4.6e-07 59.3 116 25.9
Lj1A1039T30 Lonicera japonica HOM05D005764 ORTHO05D006600 4.6e-07 59.3 115 31.3
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 4.6e-07 59.3 46 54.3
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 4.6e-07 59.3 94 25.5
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 6.1e-07 58.9 94 25.5
DCAR_021406 Daucus carota HOM05D005764 ORTHO05D006600 1.0e-06 58.2 88 37.5
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 1.0e-06 58.2 101 32.7
Sed0015079 Sechium edule HOM05D007358 ORTHO05D009117 1.0e-06 58.2 118 29.7
Dinv18433 Davidia involucrata HOM05D005764 ORTHO05D006600 1.4e-06 57.8 97 33.0
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 1.4e-06 57.8 94 27.7
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 1.8e-06 57.4 85 37.6
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 1.8e-06 57.4 80 38.8
CiPaw.11G052700 Carya illinoinensis HOM05D005764 ORTHO05D006600 2.3e-06 57.0 80 35.0
AL8G38750 Arabidopsis lyrata HOM05D005764 ORTHO05D006600 3.0e-06 56.6 82 31.7
CSS0040489 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 3.0e-06 56.6 97 30.9
Peaxi162Scf01229g00021 Petunia axillaris HOM05D007455 ORTHO05D009431 3.0e-06 56.6 82 35.4
Gohir.D12G042300 Gossypium hirsutum HOM05D007083 ORTHO05D008801 3.9e-06 56.2 80 36.2
Gorai.003G116400 Gossypium raimondii HOM05D005764 ORTHO05D006600 3.9e-06 56.2 81 32.1
THA.LOC104805375 Tarenaya hassleriana HOM05D007358 ORTHO05D009117 3.9e-06 56.2 88 33.0
A04p13440 Brassica napus HOM05D007358 ORTHO05D009117 6.7e-06 55.5 116 27.6
DCAR_002103 Daucus carota HOM05D007455 ORTHO05D009431 6.7e-06 55.5 81 37.0
Gohir.D03G110000 Gossypium hirsutum HOM05D005764 ORTHO05D006600 8.8e-06 55.1 81 29.6
Lsat_1_v5_gn_9_106260 Lactuca sativa HOM05D007455 ORTHO05D009431 8.8e-06 55.1 83 36.1
MBI19_g17433_MAGBIO Magnolia biondii HOM05D007083 ORTHO05D008801 8.8e-06 55.1 86 34.9


User provided reference genes

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