Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01319 Aquilegia oxysepala HOM05D003693 ORTHO05D031300 2.6e-121 438.7 223 100.0
Aqoxy5G04181 Aquilegia oxysepala HOM05D003693 ORTHO05D004698 2.5e-116 422.2 228 95.6
TAR563G0002 Trochodendron aralioides HOM05D003693 ORTHO05D004698 9.7e-108 393.7 228 88.6
Duzib128G1866 Durio zibethinus HOM05D003693 ORTHO05D004698 1.5e-105 386.3 228 87.7
Thecc.05G189800 Theobroma cacao HOM05D003693 ORTHO05D004698 5.9e-105 384.4 228 87.3
Hma1.2p1_0685F.1_g203180 Hydrangea macrophylla HOM05D003693 ORTHO05D004698 7.7e-105 384.0 228 86.0
Dinv09309 Davidia involucrata HOM05D003693 ORTHO05D004698 1.0e-104 383.6 228 86.8
CiPaw.16G119500 Carya illinoinensis HOM05D003693 ORTHO05D004698 1.3e-104 383.3 228 87.7
GSVIVG01032211001 Vitis vinifera HOM05D003693 ORTHO05D004698 8.5e-104 380.6 228 85.1
Dinv43405 Davidia involucrata HOM05D003693 ORTHO05D004698 1.9e-103 379.4 228 86.0
Potri.019G054500 Populus trichocarpa HOM05D003693 ORTHO05D004698 2.5e-103 379.0 228 86.0
Cfa020929 Carpinus fangiana HOM05D003693 ORTHO05D004698 4.2e-103 378.3 228 86.0
CSS0039233 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 3.6e-102 375.2 228 84.2
Atru.chr12.1748 Acer truncatum HOM05D003693 ORTHO05D004698 4.7e-102 374.8 228 86.0
Nn2g12199 Nelumbo nucifera HOM05D003693 ORTHO05D004698 4.7e-102 374.8 228 85.5
ATR1096G033 Amborella trichopoda HOM05D003693 ORTHO05D004698 7.9e-102 374.0 228 83.8
Sabra19G0063500 Salix brachista HOM05D003693 ORTHO05D004698 7.9e-102 374.0 228 84.6
Manes.12G004200 Manihot esculenta HOM05D003693 ORTHO05D004698 1.0e-101 373.6 228 84.6
QL10p037598 Quercus lobata HOM05D003693 ORTHO05D004698 1.0e-101 373.6 228 84.2
Thecc.01G406700 Theobroma cacao HOM05D003693 ORTHO05D004698 1.4e-101 373.2 228 84.6
Gohir.A05G393100 Gossypium hirsutum HOM05D003693 ORTHO05D004698 1.8e-101 372.9 229 85.2
Gohir.D04G022000 Gossypium hirsutum HOM05D003693 ORTHO05D004698 1.8e-101 372.9 229 85.2
Gorai.012G026300 Gossypium raimondii HOM05D003693 ORTHO05D004698 1.8e-101 372.9 229 85.2
Ah.10g038580 Amaranthus hybridus HOM05D003693 ORTHO05D004698 2.3e-101 372.5 228 84.2
Rhsim07G0058800 Rhododendron simsii HOM05D003693 ORTHO05D004698 2.3e-101 372.5 233 84.5
Oeu014595.1 Olea europaea HOM05D003693 ORTHO05D004698 3.0e-101 372.1 228 85.1
SGA_v2.0_scaffold119G32763 Striga asiatica HOM05D003693 ORTHO05D004698 3.0e-101 372.1 228 84.6
TWI18G0649 Tripterygium wilfordii HOM05D003693 ORTHO05D004698 3.9e-101 371.7 228 84.6
Actinidia08353 Actinidia chinensis HOM05D003693 ORTHO05D004698 5.1e-101 371.3 228 85.5
MSTRG.20559 Avicennia marina HOM05D003693 ORTHO05D004698 5.1e-101 371.3 228 83.8
Eucgr.H01402 Eucalyptus grandis HOM05D003693 ORTHO05D004698 6.7e-101 370.9 228 85.1
Eucgr.H01630 Eucalyptus grandis HOM05D003693 ORTHO05D004698 6.7e-101 370.9 228 85.1
AUR62009420 Chenopodium quinoa HOM05D003693 ORTHO05D004698 8.8e-101 370.5 228 83.8
AUR62023098 Chenopodium quinoa HOM05D003693 ORTHO05D004698 8.8e-101 370.5 228 83.8
Migut.B01266 Erythranthe guttata HOM05D003693 ORTHO05D004698 8.8e-101 370.5 228 84.6
Lj8C726G3 Lonicera japonica HOM05D003693 ORTHO05D004698 8.8e-101 370.5 228 84.2
EL10Ac2g04376 Beta vulgaris HOM05D003693 ORTHO05D004698 1.1e-100 370.2 228 83.8
CDE04G2718 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 1.1e-100 370.2 228 84.2
CDE07G0727 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 1.1e-100 370.2 228 84.2
ClCG11G009710 Citrullus lanatus HOM05D003693 ORTHO05D004698 1.1e-100 370.2 228 83.3
MELO3C008557.2 Cucumis melo HOM05D003693 ORTHO05D004698 1.5e-100 369.8 228 83.8
TWI36G1545 Tripterygium wilfordii HOM05D003693 ORTHO05D004698 1.5e-100 369.8 228 84.2
vmacro13696 Vaccinium macrocarpon HOM05D003693 ORTHO05D004698 1.5e-100 369.8 243 81.1
CANSAT21G0769 Cannabis sativa HOM05D003693 ORTHO05D004698 2.0e-100 369.4 228 84.2
CsaV3_2G010560 Cucumis sativus L. HOM05D003693 ORTHO05D004698 2.0e-100 369.4 228 83.3
THA.LOC104808730 Tarenaya hassleriana HOM05D003693 ORTHO05D004698 2.6e-100 369.0 228 83.8
MSTRG.17008 Avicennia marina HOM05D003693 ORTHO05D004698 3.3e-100 368.6 228 83.8
Lalb_Chr01g0020541 Lupinus albus HOM05D003693 ORTHO05D004698 3.3e-100 368.6 228 84.2
ECA248G0053 Erigeron canadensis HOM05D003693 ORTHO05D004698 5.7e-100 367.9 228 82.9
Lalb_Chr03g0038731 Lupinus albus HOM05D003693 ORTHO05D004698 5.7e-100 367.9 228 84.6
TAR369G0556 Trochodendron aralioides HOM05D003693 ORTHO05D004698 5.7e-100 367.9 225 85.3
Medtr7g080270 Medicago truncatula HOM05D003693 ORTHO05D004698 9.7e-100 367.1 228 82.9
COL.COLO4_12338 Corchorus olitorius HOM05D003693 ORTHO05D004698 1.3e-99 366.7 228 82.9
PSO384G0563 Papaver somniferum HOM05D003693 ORTHO05D004698 1.7e-99 366.3 228 83.8
MBI19_g25011_MAGBIO Magnolia biondii HOM05D003693 ORTHO05D004698 2.2e-99 365.9 228 83.8
Nitab4.5_0005367g0010 Nicotiana tabacum HOM05D003693 ORTHO05D004698 2.2e-99 365.9 228 83.8
PGR119G0062 Punica granatum HOM05D003693 ORTHO05D004698 2.2e-99 365.9 228 82.5
Duzib133G0510 Durio zibethinus HOM05D003693 ORTHO05D004698 4.8e-99 364.8 228 82.9
PSO339G5758 Papaver somniferum HOM05D003693 ORTHO05D004698 4.8e-99 364.8 228 83.3
Gohir.A12G100800 Gossypium hirsutum HOM05D003693 ORTHO05D004698 6.3e-99 364.4 228 83.3
Gorai.008G112800 Gossypium raimondii HOM05D003693 ORTHO05D004698 6.3e-99 364.4 228 83.3
MD04G1246300 Malus domestica HOM05D003693 ORTHO05D004698 6.3e-99 364.4 228 84.2
Nitab4.5_0001244g0140 Nicotiana tabacum HOM05D003693 ORTHO05D004698 6.3e-99 364.4 228 82.9
CAN.G1619.1 Capsicum annuum HOM05D003693 ORTHO05D004698 8.2e-99 364.0 228 82.9
Ciclev10011203m.g Citrus clementina HOM05D003693 ORTHO05D004698 8.2e-99 364.0 228 83.8
Psat3g102600 Pisum sativum HOM05D003693 ORTHO05D004698 8.2e-99 364.0 228 81.6
Gohir.D12G103600 Gossypium hirsutum HOM05D003693 ORTHO05D004698 1.1e-98 363.6 228 83.3
MD12G1263800 Malus domestica HOM05D003693 ORTHO05D004698 1.1e-98 363.6 228 83.8
PGSC0003DMG400006778 Solanum tuberosum HOM05D003693 ORTHO05D004698 1.1e-98 363.6 228 83.8
CARHR100130 Cardamine hirsuta HOM05D003693 ORTHO05D004698 2.4e-98 362.5 228 82.0
Prupe.6G362600 Prunus persica HOM05D003693 ORTHO05D004698 2.4e-98 362.5 228 83.8
Sed0016989 Sechium edule HOM05D003693 ORTHO05D004698 2.4e-98 362.5 228 82.9
DCAR_029706 Daucus carota HOM05D003693 ORTHO05D004698 3.1e-98 362.1 228 83.3
Sc10g0000370 Simmondsia chinensis HOM05D003693 ORTHO05D004698 3.1e-98 362.1 228 82.0
Lsat_1_v5_gn_1_104980 Lactuca sativa HOM05D003693 ORTHO05D004698 4.1e-98 361.7 228 81.6
TPR.G34077 Trifolium pratense HOM05D003693 ORTHO05D004698 4.1e-98 361.7 228 82.0
Duzib268G0828 Durio zibethinus HOM05D003693 ORTHO05D004698 5.3e-98 361.3 228 82.5
FvH4_6g00360 Fragaria vesca HOM05D003693 ORTHO05D004698 5.3e-98 361.3 228 83.8
FAN09G1864 Fragaria x ananassa HOM05D003693 ORTHO05D004698 5.3e-98 361.3 228 83.8
RcHm_v2.0_Chr3g0447661 Rosa chinensis HOM05D003693 ORTHO05D004698 5.3e-98 361.3 228 83.3
Ca_07998_v3 Cicer arietinum L. HOM05D003693 ORTHO05D004698 7.0e-98 360.9 228 82.5
Glyma.18G243300 Glycine max HOM05D003693 ORTHO05D004698 7.0e-98 360.9 228 82.0
THA.LOC104821617 Tarenaya hassleriana HOM05D003693 ORTHO05D004698 9.1e-98 360.5 229 81.7
TPR.G33878 Trifolium pratense HOM05D003693 ORTHO05D004698 9.1e-98 360.5 228 82.0
VMungo1383G0289 Vigna mungo HOM05D003693 ORTHO05D004698 9.1e-98 360.5 228 82.0
Peaxi162Scf00694g00440 Petunia axillaris HOM05D003693 ORTHO05D004698 1.2e-97 360.1 228 82.0
Cc02_g28770 Coffea canephora HOM05D003693 ORTHO05D004698 1.6e-97 359.8 228 80.3
Glyma.09G249100 Glycine max HOM05D003693 ORTHO05D004698 1.6e-97 359.8 228 81.6
Phvul.008G053200 Phaseolus vulgaris HOM05D003693 ORTHO05D004698 1.6e-97 359.8 228 82.5
unitig_0.g1393 Utricularia gibba HOM05D003693 ORTHO05D004698 1.6e-97 359.8 228 80.7
Sp3g21850 Schrenkiella parvula HOM05D003693 ORTHO05D004698 2.6e-97 359.0 228 81.6
Solyc01g087870.4 Solanum lycopersicum HOM05D003693 ORTHO05D004698 2.6e-97 359.0 228 82.9
Sopen01g034800 Solanum pennellii HOM05D003693 ORTHO05D004698 2.6e-97 359.0 228 82.9
FAN02G0024 Fragaria x ananassa HOM05D003693 ORTHO05D004698 3.5e-97 358.6 228 82.9
FAN05G2538 Fragaria x ananassa HOM05D003693 ORTHO05D004698 3.5e-97 358.6 228 82.9
Thhalv10002424m.g Eutrema salsugineum HOM05D003693 ORTHO05D004698 5.9e-97 357.8 228 81.1
FAN14G5956 Fragaria x ananassa HOM05D003693 ORTHO05D004698 5.9e-97 357.8 228 82.9
arahy.Tifrunner.gnm1.ann1.RCZ69X Arachis hypogaea HOM05D003693 ORTHO05D004698 1.0e-96 357.1 228 81.1
Peaxi162Scf00071g01043 Petunia axillaris HOM05D003693 ORTHO05D004698 1.0e-96 357.1 228 81.6
SalBow6G5509 Salvia bowleyana HOM05D003693 ORTHO05D004698 1.3e-96 356.7 228 80.7
Lj1g0027377 Lotus japonicus HOM05D003693 ORTHO05D004698 1.7e-96 356.3 228 82.0
SalBow6G6742 Salvia bowleyana HOM05D003693 ORTHO05D004698 3.8e-96 355.1 228 80.3
arahy.Tifrunner.gnm1.ann1.55VZFW Arachis hypogaea HOM05D003693 ORTHO05D004698 6.5e-96 354.4 228 80.7
SMO301G0028 Selaginella moellendorffii HOM05D003693 ORTHO05D004698 6.5e-96 354.4 228 78.9
AT3G24090 Arabidopsis thaliana HOM05D003693 ORTHO05D004698 8.5e-96 354.0 228 80.7
HanXRQChr06g0179741 Helianthus annuus HOM05D003693 ORTHO05D004698 8.5e-96 354.0 228 80.3
SHI13710 Sapria himalayana HOM05D003693 ORTHO05D004698 2.5e-95 352.4 228 81.1
Aa31LG8G10790 Aethionema arabicum HOM05D003693 ORTHO05D004698 3.2e-95 352.1 228 79.8
BcaB03g14607 Brassica carinata HOM05D003693 ORTHO05D004698 5.5e-95 351.3 229 81.2
AL3G39260 Arabidopsis lyrata HOM05D003693 ORTHO05D004698 9.4e-95 350.5 228 79.8
BcaC01g03357 Brassica carinata HOM05D003693 ORTHO05D004698 2.1e-94 349.4 229 81.2
A03p43420 Brassica napus HOM05D003693 ORTHO05D004698 2.1e-94 349.4 229 81.2
BolC3t17596H Brassica oleracea HOM05D003693 ORTHO05D004698 2.1e-94 349.4 229 81.2
BraA03t13480Z Brassica rapa HOM05D003693 ORTHO05D004698 2.1e-94 349.4 229 81.2
Carub.0003s2444 Capsella rubella HOM05D003693 ORTHO05D004698 3.6e-94 348.6 228 79.4
Nitab4.5_0001676g0080 Nicotiana tabacum HOM05D003693 ORTHO05D004698 6.1e-94 347.8 228 80.3
CDE08G0281 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 1.8e-93 346.3 228 79.8
PGR031G3615 Punica granatum HOM05D003693 ORTHO05D004698 1.8e-93 346.3 228 77.6
BcaB06g26591 Brassica carinata HOM05D003693 ORTHO05D004698 4.0e-93 345.1 228 80.3
C03p53370 Brassica napus HOM05D003693 ORTHO05D004698 4.0e-93 345.1 229 80.3
Aqoxy1G02791 Aquilegia oxysepala HOM05D003693 ORTHO05D004698 5.2e-93 344.7 228 81.1
BcaC06g35626 Brassica carinata HOM05D003693 ORTHO05D004698 5.2e-93 344.7 228 79.8
A07p08260 Brassica napus HOM05D003693 ORTHO05D004698 5.2e-93 344.7 228 80.3
C07p12800 Brassica napus HOM05D003693 ORTHO05D004698 5.2e-93 344.7 228 79.8
BolC7t41766H Brassica oleracea HOM05D003693 ORTHO05D004698 5.2e-93 344.7 228 79.8
BraA07t28609Z Brassica rapa HOM05D003693 ORTHO05D004698 5.2e-93 344.7 228 80.3
Haze_19361 Corylus avellana HOM05D003693 ORTHO05D004698 2.0e-92 342.8 312 63.1
SEGI_39911 Sequoiadendron giganteum HOM05D003693 ORTHO05D004698 7.5e-92 340.9 228 75.9
Mapoly0131s0027 Marchantia polymorpha HOM05D003693 ORTHO05D004698 1.8e-90 336.3 228 75.9
HPP92_019436 Vanilla planifolia HOM05D003693 ORTHO05D004698 3.8e-88 328.6 226 74.8
Zm00001eb163520 Zea mays HOM05D003693 ORTHO05D004698 8.5e-88 327.4 222 75.7
Pp3c1_10100 Physcomitrium patens HOM05D003693 ORTHO05D004698 1.6e-86 323.2 229 72.9
Pp3c2_32740 Physcomitrium patens HOM05D003693 ORTHO05D004698 6.1e-86 321.2 229 72.5
AagrBONN_evm.TU.Sc2ySwM_344.1788 Anthoceros agrestis HOM05D003693 ORTHO05D004698 1.4e-85 320.1 228 71.9
Cc00_g27460 Coffea canephora HOM05D003693 ORTHO05D004698 2.0e-81 306.2 206 77.2
AL8G20490 Arabidopsis lyrata HOM05D003693 ORTHO05D004698 1.3e-80 303.5 201 79.1
Cc00_g28470 Coffea canephora HOM05D003693 ORTHO05D004698 3.8e-80 302.0 214 74.8
Lj9A641G59 Lonicera japonica HOM05D003693 ORTHO05D004698 1.9e-79 299.7 187 82.9
Eucgr.H01403 Eucalyptus grandis HOM05D003693 ORTHO05D004698 2.0e-76 289.7 228 71.1
Eucgr.H01405 Eucalyptus grandis HOM05D003693 ORTHO05D004698 6.6e-72 274.6 221 69.7
Eucgr.H01633 Eucalyptus grandis HOM05D003693 ORTHO05D004698 1.8e-69 266.5 228 68.0
Eucgr.H01634 Eucalyptus grandis HOM05D003693 ORTHO05D004698 5.2e-69 265.0 228 67.1
MCO09G229 Micromonas commoda HOM05D003693 ORTHO05D004698 9.2e-66 254.2 238 57.6
Lsat_1_v5_gn_3_45201 Lactuca sativa HOM05D003693 ORTHO05D004698 3.9e-64 248.8 228 61.4
SalBow5G4957 Salvia bowleyana HOM05D003693 ORTHO05D004698 8.6e-64 247.7 221 62.0
PRCOL_00001226 Prasinoderma coloniale HOM05D003693 ORTHO05D004698 2.5e-63 246.1 242 54.5
Cpa.g.sc39.19 Carica papaya HOM05D003693 ORTHO05D004698 1.8e-61 240.0 141 87.9
Cre08.g375500 Chlamydomonas reinhardtii HOM05D003693 ORTHO05D004698 9.8e-60 234.2 233 54.9
CSS0008601 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 1.7e-59 233.4 141 83.7
CSS0022704 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 2.2e-59 233.0 141 83.7
Os12g0131100 Oryza sativa ssp. japonica HOM05D003693 ORTHO05D004698 1.3e-51 207.2 113 87.6
Haze_26883 Corylus avellana HOM05D003693 ORTHO05D004698 2.2e-51 206.5 228 48.2
CSS0029083 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 1.2e-46 190.7 141 73.0
CSS0010682 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 6.8e-45 184.9 113 78.8
Manes.13G004500 Manihot esculenta HOM05D003693 ORTHO05D004698 3.4e-44 182.6 215 53.5
AL8G20570 Arabidopsis lyrata HOM05D003693 ORTHO05D004698 2.5e-31 139.8 79 87.3
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 6.9e-29 131.7 74 85.1
CDE02G0831 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 2.4e-18 96.7 70 75.7
Os11g0133700 Oryza sativa ssp. japonica HOM05D003693 ORTHO05D031300 1.2e-17 94.4 73 64.4
Os12g0131150 Oryza sativa ssp. japonica HOM05D003693 ORTHO05D031300 1.2e-17 94.4 73 64.4
Zm00001eb405240 Zea mays HOM05D003693 ORTHO05D004698 3.9e-16 89.4 92 54.3
Lsat_1_v5_gn_3_99160 Lactuca sativa HOM05D003693 ORTHO05D231443 1.9e-07 60.5 61 52.5
HPP92_019410 Vanilla planifolia HOM05D003693 ORTHO05D004698 8.2e-06 55.1 77 46.8


User provided reference genes

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