Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01311 Aquilegia oxysepala HOM05D000312 ORTHO05D018406 4.6e-36 154.1 79 100.0
Aqoxy4G01361 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 2.4e-13 78.6 56 69.6
Aqoxy4G01367 Aquilegia oxysepala HOM05D000051 ORTHO05D018406 6.0e-12 73.9 50 72.0
Aqoxy3G03030 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 3.9e-11 71.2 53 60.4
Aqoxy1G01753 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 8.7e-11 70.1 47 68.1
Aqoxy1G01747 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.1e-10 69.7 66 54.5
Aqoxy1G01760 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.5e-10 69.3 50 66.0
Aqoxy3G00832 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.6e-09 65.9 49 63.3
Aqoxy1G01752 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 4.8e-09 64.3 45 68.9
Aqoxy1G01746 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 8.1e-09 63.5 65 50.8
Aqoxy5G02413 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 8.1e-09 63.5 68 47.1
Lj5g0020125 Lotus japonicus HOM05D000312 ORTHO05D000221 8.1e-09 63.5 81 43.2
Aqoxy3G02170 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.4e-08 62.8 71 50.7
MBI02_g15268_MAGBIO Magnolia biondii HOM05D000051 ORTHO05D000015 4.0e-08 61.2 68 42.6
Aqoxy4G02231 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 5.3e-08 60.8 45 60.0
Aqoxy6G02388 Aquilegia oxysepala HOM05D020658 ORTHO05D000015 5.3e-08 60.8 50 54.0
Aqoxy6G01724 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.2e-07 59.7 38 71.1
Phvul.001G017300 Phaseolus vulgaris HOM05D000312 ORTHO05D000221 2.0e-07 58.9 62 48.4
Aqoxy2G01299 Aquilegia oxysepala HOM05D020658 ORTHO05D000015 2.6e-07 58.5 51 54.9
Prupe.8G149000 Prunus persica HOM05D000312 ORTHO05D000221 2.6e-07 58.5 77 40.3
AL8G30260 Arabidopsis lyrata HOM05D003087 ORTHO05D003312 3.4e-07 58.2 50 52.0
Medtr1g021820 Medicago truncatula HOM05D000312 ORTHO05D000221 3.4e-07 58.2 65 46.2
Psat6g010840 Pisum sativum HOM05D000312 ORTHO05D000221 3.4e-07 58.2 67 44.8
DCAR_015380 Daucus carota HOM05D000312 ORTHO05D000221 4.5e-07 57.8 63 49.2
Gohir.D02G008775 Gossypium hirsutum HOM05D000051 ORTHO05D000015 7.6e-07 57.0 45 55.6
AT5G54820 Arabidopsis thaliana HOM05D003087 ORTHO05D003312 9.9e-07 56.6 50 46.0
CSS0034448 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 9.9e-07 56.6 62 48.4
Medtr1g021825 Medicago truncatula HOM05D000312 ORTHO05D000221 9.9e-07 56.6 77 42.9
Sp4g10190 Schrenkiella parvula HOM05D000689 ORTHO05D000015 9.9e-07 56.6 62 45.2
CSS0005231 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.3e-06 56.2 45 53.3
DCAR_015371 Daucus carota HOM05D000312 ORTHO05D000221 1.3e-06 56.2 54 44.4
Medtr8g014160 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-06 56.2 66 43.9
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 1.3e-06 56.2 78 46.2
QL93p1866_0198 Quercus lobata HOM05D001477 ORTHO05D001182 1.3e-06 56.2 78 46.2
Hma1.2p1_1241F.1_g269820 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 1.7e-06 55.8 54 51.9
Nitab4.5_0004294g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-06 55.8 48 54.2
Nitab4.5_0012833g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-06 55.8 51 51.0
TPR.G24740 Trifolium pratense HOM05D000051 ORTHO05D000015 1.7e-06 55.8 41 63.4
Actinidia24036 Actinidia chinensis HOM05D000312 ORTHO05D000221 2.2e-06 55.5 49 51.0
CANSAT78G1945 Cannabis sativa HOM05D000051 ORTHO05D010453 2.2e-06 55.5 50 50.0
Gohir.D11G296760 Gossypium hirsutum HOM05D000051 ORTHO05D000015 2.2e-06 55.5 50 54.0
Gohir.D11G296792 Gossypium hirsutum HOM05D000051 ORTHO05D000015 2.2e-06 55.5 50 54.0
Gorai.007G321400 Gossypium raimondii HOM05D000051 ORTHO05D000015 2.2e-06 55.5 50 54.0
HanXRQChr07g0186371 Helianthus annuus HOM05D000312 ORTHO05D000221 2.2e-06 55.5 52 50.0
TPR.G14580 Trifolium pratense HOM05D000312 ORTHO05D000221 2.2e-06 55.5 62 45.2
Aqoxy2G03350 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 2.9e-06 55.1 61 41.0
Aqoxy4G00633 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 2.9e-06 55.1 61 45.9
CSS0010373 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 2.9e-06 55.1 62 46.8
Migut.E00519 Erythranthe guttata HOM05D005930 ORTHO05D003423 2.9e-06 55.1 62 48.4
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 2.9e-06 55.1 60 51.7
TWI38G2269 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 2.9e-06 55.1 62 45.2
Aqoxy1G01777 Aquilegia oxysepala HOM05D000051 ORTHO05D018406 3.8e-06 54.7 50 64.0
Aqoxy4G00423 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 3.8e-06 54.7 50 56.0
CANSAT54G1500 Cannabis sativa HOM05D000051 ORTHO05D010453 3.8e-06 54.7 55 45.5
Dinv21725 Davidia involucrata HOM05D000051 ORTHO05D000015 3.8e-06 54.7 69 44.9
Gohir.A02G008600 Gossypium hirsutum HOM05D000051 ORTHO05D000015 3.8e-06 54.7 47 53.2
Gohir.D02G008900 Gossypium hirsutum HOM05D000051 ORTHO05D000015 3.8e-06 54.7 50 52.0
HanXRQChr16g0502171 Helianthus annuus HOM05D000312 ORTHO05D000221 3.8e-06 54.7 66 43.9
MD05G1104600 Malus domestica HOM05D000312 ORTHO05D000221 3.8e-06 54.7 58 43.1
Medtr2g091145 Medicago truncatula HOM05D000312 ORTHO05D000221 3.8e-06 54.7 80 42.5
PSO541G6498 Papaver somniferum HOM05D000051 ORTHO05D000015 3.8e-06 54.7 50 48.0
PSO675G9061 Papaver somniferum HOM05D000051 ORTHO05D000015 3.8e-06 54.7 50 48.0
Potri.011G024600 Populus trichocarpa HOM05D000051 ORTHO05D000015 3.8e-06 54.7 70 42.9
GSVIVG01038076001 Vitis vinifera HOM05D000051 ORTHO05D000015 3.8e-06 54.7 50 52.0
Zm00001eb288120 Zea mays HOM05D000312 ORTHO05D000221 3.8e-06 54.7 64 42.2
Aqoxy1G01740 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 4.9e-06 54.3 61 44.3
AL1G66030 Arabidopsis lyrata HOM05D003087 ORTHO05D003312 4.9e-06 54.3 54 42.6
BcaC06g31035 Brassica carinata HOM05D000051 ORTHO05D000015 4.9e-06 54.3 56 42.9
C05p47950 Brassica napus HOM05D002909 ORTHO05D000493 4.9e-06 54.3 50 50.0
BraA05t21995Z Brassica rapa HOM05D002909 ORTHO05D000493 4.9e-06 54.3 50 50.0
CSS0035521 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 4.9e-06 54.3 48 50.0
Duzib106G1684 Durio zibethinus HOM05D000051 ORTHO05D000015 4.9e-06 54.3 63 44.4
Gorai.005G010600 Gossypium raimondii HOM05D000051 ORTHO05D000015 4.9e-06 54.3 50 50.0
Gorai.005G010700 Gossypium raimondii HOM05D000051 ORTHO05D000015 4.9e-06 54.3 47 53.2
RcHm_v2.0_Chr6g0248921 Rosa chinensis HOM05D000312 ORTHO05D000221 4.9e-06 54.3 51 49.0
TAR371G0233 Trochodendron aralioides HOM05D000312 ORTHO05D000221 4.9e-06 54.3 51 47.1
TAR371G0453 Trochodendron aralioides HOM05D000312 ORTHO05D000221 4.9e-06 54.3 51 47.1
Actinidia31916 Actinidia chinensis HOM05D000312 ORTHO05D000221 6.4e-06 53.9 46 50.0
arahy.Tifrunner.gnm1.ann1.S3SMBV Arachis hypogaea HOM05D000312 ORTHO05D000221 6.4e-06 53.9 50 50.0
arahy.Tifrunner.gnm1.ann1.X6923X Arachis hypogaea HOM05D000312 ORTHO05D000221 6.4e-06 53.9 50 50.0
CSS0005659 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 6.4e-06 53.9 45 48.9
CSS0050034 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 6.4e-06 53.9 45 48.9
CANSAT54G1896 Cannabis sativa HOM05D000051 ORTHO05D010453 6.4e-06 53.9 47 51.1
COL.COLO4_11298 Corchorus olitorius HOM05D000051 ORTHO05D000015 6.4e-06 53.9 51 49.0
Gohir.A02G008900 Gossypium hirsutum HOM05D000051 ORTHO05D000015 6.4e-06 53.9 45 55.6
Gohir.D02G009100 Gossypium hirsutum HOM05D000051 ORTHO05D000015 6.4e-06 53.9 45 55.6
Gorai.005G010900 Gossypium raimondii HOM05D000051 ORTHO05D000015 6.4e-06 53.9 45 55.6
HanXRQChr17g0533631 Helianthus annuus HOM05D000312 ORTHO05D000221 6.4e-06 53.9 64 42.2
Medtr1g013560 Medicago truncatula HOM05D000312 ORTHO05D000221 6.4e-06 53.9 73 39.7
Medtr5g066900 Medicago truncatula HOM05D003087 ORTHO05D003312 6.4e-06 53.9 50 46.0
PSO017G7060 Papaver somniferum HOM05D000051 ORTHO05D000015 6.4e-06 53.9 68 41.2
Potri.014G163866 Populus trichocarpa HOM05D000051 ORTHO05D000015 6.4e-06 53.9 45 53.3
Rhsim12G0067900 Rhododendron simsii HOM05D000312 ORTHO05D000221 6.4e-06 53.9 59 45.8
SGA_v2.0_scaffold286G47142 Striga asiatica HOM05D005930 ORTHO05D003423 6.4e-06 53.9 48 54.2
Aa31LG3G10740 Aethionema arabicum HOM05D003087 ORTHO05D003312 8.4e-06 53.5 67 38.8
CAN.G1163.6 Capsicum annuum HOM05D000312 ORTHO05D000221 8.4e-06 53.5 46 52.2
COL.COLO4_27738 Corchorus olitorius HOM05D000312 ORTHO05D000221 8.4e-06 53.5 59 49.2
ECA236G3047 Erigeron canadensis HOM05D000312 ORTHO05D000221 8.4e-06 53.5 70 40.0
Thhalv10015307m.g Eutrema salsugineum HOM05D003087 ORTHO05D003312 8.4e-06 53.5 52 46.2
Gohir.D02G008800 Gossypium hirsutum HOM05D000051 ORTHO05D000015 8.4e-06 53.5 47 51.1
Gorai.005G010500 Gossypium raimondii HOM05D000051 ORTHO05D000015 8.4e-06 53.5 47 51.1
HanXRQChr17g0564541 Helianthus annuus HOM05D000051 ORTHO05D000015 8.4e-06 53.5 46 47.8
MBI19_g37318_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000221 8.4e-06 53.5 64 46.9
Medtr1g013580 Medicago truncatula HOM05D000312 ORTHO05D000221 8.4e-06 53.5 65 44.6
Oeu036484.2 Olea europaea HOM05D000051 ORTHO05D000015 8.4e-06 53.5 70 41.4
PSO782G1398 Papaver somniferum HOM05D000051 ORTHO05D000015 8.4e-06 53.5 60 48.3
Rhsim12G0068900 Rhododendron simsii HOM05D000312 ORTHO05D000221 8.4e-06 53.5 51 45.1
Solyc11g011230.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 8.4e-06 53.5 67 41.8
TWI38G0777 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 8.4e-06 53.5 62 40.3
TWI38G2327 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 8.4e-06 53.5 47 51.1


User provided reference genes

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