Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.1e-95 353.2 175 100.0
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.8e-45 186.4 95 98.9
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.2e-39 167.2 92 89.1
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 5.0e-27 125.2 127 52.8
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 4.3e-26 122.1 93 67.7
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 5.6e-26 121.7 83 73.5
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 7.3e-26 121.3 82 73.2
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 9.5e-26 120.9 84 70.2
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.2e-25 120.6 83 73.5
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.6e-25 120.2 108 59.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.6e-25 120.2 66 81.8
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.1e-25 119.8 87 69.0
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.1e-25 119.8 87 69.0
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 2.1e-25 119.8 91 62.6
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 2.1e-25 119.8 84 67.9
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.8e-25 119.4 91 64.8
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 3.6e-25 119.0 89 62.9
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 4.7e-25 118.6 93 62.4
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 4.7e-25 118.6 90 67.8
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 6.2e-25 118.2 84 66.7
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 6.2e-25 118.2 91 62.6
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 6.2e-25 118.2 84 69.0
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 8.1e-25 117.9 84 70.2
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.1e-24 117.5 84 67.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.1e-24 117.5 84 67.9
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.1e-24 117.5 82 68.3
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.8e-24 116.7 96 62.5
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.8e-24 116.7 84 66.7
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.8e-24 116.7 84 67.9
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 2.3e-24 116.3 86 66.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 2.3e-24 116.3 86 65.1
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 3.1e-24 115.9 85 68.2
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.1e-24 115.9 91 60.4
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 4.0e-24 115.5 104 57.7
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 4.0e-24 115.5 87 60.9
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 6.8e-24 114.8 68 77.9
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 8.9e-24 114.4 84 67.9
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.2e-23 114.0 132 51.5
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.5e-23 113.6 82 65.9
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.5e-23 113.6 75 70.7
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 2.0e-23 113.2 110 54.5
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.6e-23 112.8 127 49.6
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.4e-23 112.5 103 56.3
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 4.4e-23 112.1 81 67.9
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 4.4e-23 112.1 81 67.9
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 5.8e-23 111.7 98 55.1
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 5.8e-23 111.7 84 66.7
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 5.8e-23 111.7 84 66.7
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 5.8e-23 111.7 91 58.2
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 5.8e-23 111.7 86 62.8
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 9.8e-23 110.9 89 61.8
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 9.8e-23 110.9 91 61.5
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 9.8e-23 110.9 82 65.9
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 9.8e-23 110.9 83 63.9
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.3e-22 110.5 103 56.3
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.7e-22 110.2 83 61.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.2e-22 109.8 81 65.4
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 2.2e-22 109.8 87 62.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 3.7e-22 109.0 70 74.3
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 3.7e-22 109.0 70 74.3
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 4.9e-22 108.6 93 60.2
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 6.4e-22 108.2 86 64.0
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 8.3e-22 107.8 73 69.9
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 8.3e-22 107.8 91 63.7
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 8.3e-22 107.8 85 64.7
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.1e-21 107.5 97 57.7
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.1e-21 107.5 76 69.7
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.4e-21 107.1 70 71.4
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.4e-21 107.1 75 74.7
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.9e-21 106.7 70 71.4
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.9e-21 106.7 94 58.5
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 2.4e-21 106.3 89 60.7
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 3.2e-21 105.9 79 64.6
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 3.2e-21 105.9 70 70.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 3.2e-21 105.9 70 70.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 7.1e-21 104.8 84 59.5
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 9.2e-21 104.4 89 58.4
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 9.2e-21 104.4 83 60.2
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 2.1e-20 103.2 60 80.0
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 2.7e-20 102.8 89 58.4
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 2.7e-20 102.8 116 50.9
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 6.0e-20 101.7 84 59.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 2.3e-19 99.8 83 62.7
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 2.3e-19 99.8 60 75.0
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.9e-19 99.0 84 58.3
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.5e-18 97.1 103 50.5
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.6e-17 93.6 59 74.6
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.2e-16 88.6 111 45.0
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 5.2e-16 88.6 84 50.0
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 8.9e-16 87.8 103 47.6
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.7e-14 83.6 79 50.6
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 6.4e-14 81.6 72 58.3
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 2.4e-13 79.7 68 51.5
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.2e-12 77.4 63 52.4
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 2.1e-12 76.6 84 52.4
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.5e-10 69.7 90 46.7
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.5e-10 69.7 90 46.7
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 6.2e-09 65.1 82 47.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.8e-08 63.5 89 44.9
Aqoxy2G01375 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.2e-08 62.0 48 60.4
Aqoxy2G02167 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-07 60.8 40 65.0
Aqoxy2G02404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-07 60.8 40 65.0
Aqoxy5G01166 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-07 60.8 43 58.1
Aqoxy2G02249 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-07 60.5 42 66.7


User provided reference genes

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