Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01208 Aquilegia oxysepala HOM05D001468 ORTHO05D078595 9.7e-234 813.1 421 100.0
Nn6g34918 Nelumbo nucifera HOM05D001468 ORTHO05D001404 2.3e-17 94.4 497 27.6
Nn2g14146 Nelumbo nucifera HOM05D001468 ORTHO05D001404 9.6e-16 89.0 504 26.6
PSO339G3612 Papaver somniferum HOM05D001468 ORTHO05D001404 1.8e-14 84.7 465 26.2
PSO384G4358 Papaver somniferum HOM05D001468 ORTHO05D001404 4.9e-12 76.6 460 26.5
TAR633G0498 Trochodendron aralioides HOM05D001468 ORTHO05D001404 6.5e-12 76.3 503 24.9
Aqoxy4G02787 Aquilegia oxysepala HOM05D001468 ORTHO05D001404 5.5e-11 73.2 467 24.8
TAR623G0506 Trochodendron aralioides HOM05D001468 ORTHO05D001404 3.5e-10 70.5 483 25.7
GSVIVG01001003001 Vitis vinifera HOM05D001468 ORTHO05D001404 3.5e-10 70.5 443 25.5
HanXRQChr08g0217521 Helianthus annuus HOM05D001468 ORTHO05D001404 1.5e-08 65.1 233 27.0
GSVIVG01036136001 Vitis vinifera HOM05D001468 ORTHO05D001404 1.5e-08 65.1 473 24.3
CANSAT54G2058 Cannabis sativa HOM05D001468 ORTHO05D001404 9.7e-08 62.4 442 24.9
Carub.0003s3365 Capsella rubella HOM05D001468 ORTHO05D001404 9.7e-08 62.4 381 26.8
MD03G1143400 Malus domestica HOM05D001468 ORTHO05D001404 1.6e-07 61.6 402 23.4
Ciclev10027692m.g Citrus clementina HOM05D001468 ORTHO05D001404 2.2e-07 61.2 473 25.6
DCAR_011960 Daucus carota HOM05D001468 ORTHO05D001404 2.2e-07 61.2 338 28.4
Dinv36794 Davidia involucrata HOM05D001468 ORTHO05D001404 2.2e-07 61.2 272 28.3
RcHm_v2.0_Chr5g0044401 Rosa chinensis HOM05D001468 ORTHO05D001404 2.2e-07 61.2 436 23.9
HanXRQChr04g0126081 Helianthus annuus HOM05D001468 ORTHO05D001404 3.7e-07 60.5 470 25.7
Aa31LG1G13070 Aethionema arabicum HOM05D001468 ORTHO05D001404 4.8e-07 60.1 366 25.4
QL01p012370 Quercus lobata HOM05D001468 ORTHO05D001404 1.1e-06 58.9 538 24.3
BcaB03g14391 Brassica carinata HOM05D001468 ORTHO05D001404 2.4e-06 57.8 332 24.7
Oeu032804.1 Olea europaea HOM05D001468 ORTHO05D001404 2.4e-06 57.8 271 26.9
Gohir.A08G004900 Gossypium hirsutum HOM05D001468 ORTHO05D001404 5.3e-06 56.6 458 23.8
Prupe.2G075900 Prunus persica HOM05D001468 ORTHO05D001404 5.3e-06 56.6 457 23.6
ATR0776G073 Amborella trichopoda HOM05D001468 ORTHO05D001404 6.9e-06 56.2 486 23.5
CDE02G0607 Ceratophyllum demersum HOM05D001468 ORTHO05D001404 6.9e-06 56.2 510 23.3
arahy.Tifrunner.gnm1.ann1.WV99JK Arachis hypogaea HOM05D001468 ORTHO05D001404 9.0e-06 55.8 449 24.9
Glyma.11G183800 Glycine max HOM05D001468 ORTHO05D001404 9.0e-06 55.8 356 26.1
HanXRQChr06g0178201 Helianthus annuus HOM05D001468 ORTHO05D001404 9.0e-06 55.8 469 23.7
MBI15_g09708_MAGBIO Magnolia biondii HOM05D001468 ORTHO05D001404 9.0e-06 55.8 400 24.0


User provided reference genes

Program Settings