Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01180 Aquilegia oxysepala HOM05D006980 ORTHO05D008704 2.1e-123 446.8 217 100.0
TAR633G1277 Trochodendron aralioides HOM05D006980 ORTHO05D008704 3.8e-88 329.7 217 72.4
PSO541G2622 Papaver somniferum HOM05D006980 ORTHO05D008704 8.7e-85 318.5 217 68.7
PSO675G7214 Papaver somniferum HOM05D006980 ORTHO05D008704 5.3e-82 309.3 216 67.6
Nn6g34894 Nelumbo nucifera HOM05D006980 ORTHO05D008704 1.2e-70 271.6 186 72.0
CSS0041599 Camellia sinensis var. sinensis HOM05D006980 ORTHO05D008704 3.6e-70 270.0 226 61.1
Sc02g0000270 Simmondsia chinensis HOM05D006980 ORTHO05D008704 1.4e-69 268.1 184 66.8
CANSAT64G1568 Cannabis sativa HOM05D006980 ORTHO05D008704 1.8e-66 257.7 216 58.8
CDE06G1324 Ceratophyllum demersum HOM05D004140 ORTHO05D006116 1.8e-66 257.7 219 58.4
EL10Ac6g13708 Beta vulgaris HOM05D006980 ORTHO05D008704 2.4e-66 257.3 188 65.4
Dinv21206 Davidia involucrata HOM05D006980 ORTHO05D008704 3.1e-66 256.9 218 58.7
Prupe.7G109800 Prunus persica HOM05D006980 ORTHO05D008704 5.3e-66 256.1 220 58.6
Ah.02g130100 Amaranthus hybridus HOM05D006980 ORTHO05D008704 3.5e-65 253.4 213 59.2
Actinidia05428 Actinidia chinensis HOM05D006980 ORTHO05D008704 1.2e-62 245.0 181 61.3
RcHm_v2.0_Chr3g0473791 Rosa chinensis HOM05D006980 ORTHO05D008704 2.7e-62 243.8 209 56.9
AUR62014076 Chenopodium quinoa HOM05D006980 ORTHO05D008704 3.0e-61 240.4 218 56.4
QL07p038724 Quercus lobata HOM05D006980 ORTHO05D008704 1.1e-60 238.4 165 64.2
CiPaw.09G014400 Carya illinoinensis HOM05D006980 ORTHO05D008704 1.5e-60 238.0 228 54.4
FAN05G0999 Fragaria x ananassa HOM05D006980 ORTHO05D008704 2.0e-60 237.7 215 54.9
AUR62005415 Chenopodium quinoa HOM05D006980 ORTHO05D008704 2.8e-59 233.8 218 56.0
Cfa016610 Carpinus fangiana HOM05D006980 ORTHO05D008704 8.2e-59 232.3 222 54.1
ATR0051G062 Amborella trichopoda HOM05D006980 ORTHO05D008704 5.3e-58 229.6 177 56.5
Lsat_1_v5_gn_5_164841 Lactuca sativa HOM05D006980 ORTHO05D008704 5.3e-58 229.6 180 58.9
QL07p038975 Quercus lobata HOM05D006980 ORTHO05D008704 7.0e-58 229.2 165 62.4
Cc02_g28460 Coffea canephora HOM05D006980 ORTHO05D008704 1.2e-57 228.4 213 48.8
ECA248G2176 Erigeron canadensis HOM05D006980 ORTHO05D008704 1.5e-55 221.5 181 56.4
Eucgr.G00971 Eucalyptus grandis HOM05D006980 ORTHO05D008704 3.2e-55 220.3 213 50.2
Nitab4.5_0000025g0100 Nicotiana tabacum HOM05D006980 ORTHO05D008704 3.2e-55 220.3 218 48.6
GSVIVG01029738001 Vitis vinifera HOM05D006980 ORTHO05D008704 4.2e-55 219.9 217 52.5
Potri.006G068700 Populus trichocarpa HOM05D006980 ORTHO05D008704 5.5e-55 219.5 180 57.8
Manes.09G055100 Manihot esculenta HOM05D006980 ORTHO05D008704 9.4e-55 218.8 178 57.3
CsaV3_6G007180 Cucumis sativus L. HOM05D006980 ORTHO05D008704 1.2e-54 218.4 215 50.7
Lj2P137T25 Lonicera japonica HOM05D006980 ORTHO05D008704 2.1e-54 217.6 148 64.9
TWI77G0642 Tripterygium wilfordii HOM05D006980 ORTHO05D008704 2.1e-54 217.6 199 54.3
Nitab4.5_0003259g0020 Nicotiana tabacum HOM05D006980 ORTHO05D008704 4.7e-54 216.5 218 47.7
MELO3C022409.2 Cucumis melo HOM05D006980 ORTHO05D008704 6.1e-54 216.1 215 49.8
PGR142G3286 Punica granatum HOM05D006980 ORTHO05D008704 6.1e-54 216.1 191 57.1
Peaxi162Scf00045g00156 Petunia axillaris HOM05D006980 ORTHO05D008704 8.0e-54 215.7 218 47.7
Solyc08g006170.1 Solanum lycopersicum HOM05D006980 ORTHO05D008704 8.0e-54 215.7 218 48.6
PGSC0003DMG401009543 Solanum tuberosum HOM05D006980 ORTHO05D008704 8.0e-54 215.7 218 48.6
Sed0006527 Sechium edule HOM05D006980 ORTHO05D008704 1.8e-53 214.5 211 51.2
HanXRQChr02g0032651 Helianthus annuus HOM05D006980 ORTHO05D008704 3.0e-53 213.8 221 51.1
Sopen08g002140 Solanum pennellii HOM05D006980 ORTHO05D008704 3.0e-53 213.8 218 48.2
Lj1g0023344 Lotus japonicus HOM05D006980 ORTHO05D008704 8.8e-53 212.2 217 49.3
Thecc.05G089500 Theobroma cacao HOM05D006980 ORTHO05D008704 8.8e-53 212.2 216 50.0
Rhsim03G0075000 Rhododendron simsii HOM05D006980 ORTHO05D008704 1.5e-52 211.5 230 48.7
CAN.G2030.1 Capsicum annuum HOM05D006980 ORTHO05D008704 5.7e-52 209.5 216 48.1
Ciclev10011570m.g Citrus clementina HOM05D006980 ORTHO05D008704 1.3e-51 208.4 220 49.1
COL.COLO4_29731 Corchorus olitorius HOM05D006980 ORTHO05D008704 2.8e-51 207.2 219 50.2
Cpa.g.sc166.4 Carica papaya HOM05D006980 ORTHO05D008704 8.3e-51 205.7 221 48.0
arahy.Tifrunner.gnm1.ann1.3P0NFT Arachis hypogaea HOM05D006980 ORTHO05D008704 4.1e-50 203.4 228 45.2
SHI12421 Sapria himalayana HOM05D006980 ORTHO05D008704 9.1e-50 202.2 180 53.3
TPR.G19555 Trifolium pratense HOM05D006980 ORTHO05D008704 9.1e-50 202.2 164 54.9
arahy.Tifrunner.gnm1.ann1.IK7M5W Arachis hypogaea HOM05D006980 ORTHO05D008704 1.6e-49 201.4 228 44.3
CAN.G137.42 Capsicum annuum HOM05D006980 ORTHO05D008704 4.5e-49 199.9 161 54.0
MSTRG.19261 Avicennia marina HOM05D006980 ORTHO05D008704 1.0e-48 198.7 217 47.0
GSVIVG01015930001 Vitis vinifera HOM05D006980 ORTHO05D008704 1.3e-48 198.4 210 51.4
ClCG06G001250 Citrullus lanatus HOM05D006980 ORTHO05D008704 1.7e-48 198.0 216 46.3
SalBow3G1904 Salvia bowleyana HOM05D006980 ORTHO05D008704 3.8e-48 196.8 220 46.4
Medtr7g104640 Medicago truncatula HOM05D006980 ORTHO05D008704 1.1e-47 195.3 164 53.7
Atru.chr8.1533 Acer truncatum HOM05D006980 ORTHO05D008704 3.2e-47 193.7 170 54.1
SGA_v2.0_scaffold13G06715 Striga asiatica HOM05D006980 ORTHO05D008704 4.2e-47 193.4 226 46.0
Oeu056884.1 Olea europaea HOM05D006980 ORTHO05D008704 3.0e-45 187.2 178 50.6
THA.LOC104804920 Tarenaya hassleriana HOM05D006980 ORTHO05D008704 6.8e-45 186.0 223 44.4
CARHR130480 Cardamine hirsuta HOM05D006980 ORTHO05D008704 1.2e-44 185.3 217 44.7
Lalb_Chr20g0111701 Lupinus albus HOM05D006980 ORTHO05D008704 1.5e-44 184.9 179 50.3
BcaB02g09370 Brassica carinata HOM05D006980 ORTHO05D008704 4.4e-44 183.3 227 42.7
Duzib106G0372 Durio zibethinus HOM05D006980 ORTHO05D008704 4.4e-44 183.3 216 45.4
Cc00_g27900 Coffea canephora HOM05D006980 ORTHO05D008704 5.7e-44 183.0 207 43.5
Migut.J01034 Erythranthe guttata HOM05D006980 ORTHO05D008704 1.7e-43 181.4 221 44.3
Eucgr.G00972 Eucalyptus grandis HOM05D006980 ORTHO05D008704 3.7e-43 180.3 207 45.9
Aa31LG5G21360 Aethionema arabicum HOM05D006980 ORTHO05D008704 6.3e-43 179.5 224 42.9
AL4G32340 Arabidopsis lyrata HOM05D006980 ORTHO05D008704 1.8e-42 177.9 223 40.4
BcaC02g11726 Brassica carinata HOM05D006980 ORTHO05D008704 3.1e-42 177.2 155 49.7
BcaC02g11728 Brassica carinata HOM05D006980 ORTHO05D008704 3.1e-42 177.2 155 49.7
Gorai.009G402600 Gossypium raimondii HOM05D006980 ORTHO05D008704 3.1e-42 177.2 223 43.0
Sp4g18460 Schrenkiella parvula HOM05D006980 ORTHO05D008704 3.1e-42 177.2 223 41.7
AT2G36240 Arabidopsis thaliana HOM05D006980 ORTHO05D008704 5.9e-41 172.9 223 39.9
SEGI_13947 Sequoiadendron giganteum HOM05D006980 ORTHO05D008704 1.3e-40 171.8 204 45.6
SEGI_40503 Sequoiadendron giganteum HOM05D006980 ORTHO05D008704 1.3e-40 171.8 204 45.6
BcaC02g11732 Brassica carinata HOM05D006980 ORTHO05D008704 6.6e-40 169.5 228 40.8
BolC4t22838H Brassica oleracea HOM05D006980 ORTHO05D008704 6.6e-40 169.5 228 40.8
HPP92_011900 Vanilla planifolia HOM05D006980 ORTHO05D008704 1.5e-39 168.3 169 47.9
A05p09600 Brassica napus HOM05D006980 ORTHO05D008704 3.3e-39 167.2 225 41.8
C04p11900 Brassica napus HOM05D006980 ORTHO05D008704 3.3e-39 167.2 227 41.0
Phvul.001G190300 Phaseolus vulgaris HOM05D006980 ORTHO05D008704 7.2e-39 166.0 190 44.2
BcaC02g11731 Brassica carinata HOM05D006980 ORTHO05D008704 1.2e-38 165.2 140 50.7
BcaB02g09372 Brassica carinata HOM05D006980 ORTHO05D008704 1.6e-38 164.9 187 43.9
VMungo1383G3509 Vigna mungo HOM05D006980 ORTHO05D008704 2.1e-38 164.5 192 41.7
BraA05t19913Z Brassica rapa HOM05D006980 ORTHO05D008704 8.0e-38 162.5 224 41.1
Glyma.03G196000 Glycine max HOM05D006980 ORTHO05D008704 2.4e-34 151.0 159 45.3
FAN02G3599 Fragaria x ananassa HOM05D006980 ORTHO05D008704 1.2e-33 148.7 107 63.6
Haze_19614 Corylus avellana HOM05D006980 ORTHO05D008704 1.6e-33 148.3 107 63.6
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 2.0e-33 147.9 115 57.4
Sabra06G0051200 Salix brachista HOM05D006980 ORTHO05D008704 1.6e-30 138.3 107 58.9
DCAR_013476 Daucus carota HOM05D006980 ORTHO05D008704 7.5e-28 129.4 87 66.7
arahy.Tifrunner.gnm1.ann1.FQN2WV Arachis hypogaea HOM05D006980 ORTHO05D008704 6.4e-27 126.3 95 55.8
Thhalv10016603m.g Eutrema salsugineum HOM05D006980 ORTHO05D008704 1.2e-25 122.1 189 34.4
Ca_09007_v3 Cicer arietinum L. HOM05D006980 ORTHO05D008704 6.6e-24 116.3 107 50.5
Psat3g033240 Pisum sativum HOM05D006980 ORTHO05D008704 2.5e-23 114.4 107 51.4
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 1.2e-22 112.1 225 33.3
Zm00001eb365120 Zea mays HOM05D006980 ORTHO05D008704 6.6e-16 89.7 192 29.7
SEGI_09666 Sequoiadendron giganteum HOM05D007402 ORTHO05D003673 2.7e-09 67.8 137 29.2
Zm00001eb434610 Zea mays HOM05D006980 ORTHO05D008704 7.8e-09 66.2 98 32.7
ATR0068G034 Amborella trichopoda HOM05D007402 ORTHO05D003673 1.1e-07 62.4 196 26.5
Cc01_g16440 Coffea canephora HOM05D007486 ORTHO05D003673 1.1e-07 62.4 198 27.3
Nn4g25527 Nelumbo nucifera HOM05D007409 ORTHO05D009264 1.1e-07 62.4 179 27.9
PSO541G6128 Papaver somniferum HOM05D007409 ORTHO05D009264 4.3e-07 60.5 123 31.7
FvH4_6g18780 Fragaria vesca HOM05D006980 ORTHO05D008704 7.3e-07 59.7 43 65.1
FAN14G4048 Fragaria x ananassa HOM05D006980 ORTHO05D008704 7.3e-07 59.7 43 65.1
Carub.0004s1800 Capsella rubella HOM05D006980 ORTHO05D008704 9.6e-07 59.3 53 45.3
Ciclev10028524m.g Citrus clementina HOM05D007402 ORTHO05D003673 9.6e-07 59.3 150 27.3
EL10Ac7g17952 Beta vulgaris HOM05D007486 ORTHO05D003673 1.6e-06 58.5 194 27.8
FAN05G0477 Fragaria x ananassa HOM05D006980 ORTHO05D008704 1.6e-06 58.5 43 60.5
COL.COLO4_34570 Corchorus olitorius HOM05D007409 ORTHO05D009264 2.8e-06 57.8 121 28.1
Ciclev10004501m.g Citrus clementina HOM05D007409 ORTHO05D009264 4.7e-06 57.0 140 27.9
Aqoxy7G03720 Aquilegia oxysepala HOM05D006819 ORTHO05D008763 8.1e-06 56.2 125 29.6


User provided reference genes

Program Settings