Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 2.5e-50 201.8 105 100.0
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 8.2e-25 117.1 103 58.3
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.4e-24 116.3 101 58.4
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.4e-24 116.3 98 62.2
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 4.1e-24 114.8 88 67.0
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 9.1e-24 113.6 85 67.1
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 9.1e-24 113.6 101 62.4
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.6e-23 112.8 101 61.4
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.7e-23 112.1 82 67.1
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.7e-23 112.1 82 65.9
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 2.7e-23 112.1 90 62.2
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 2.7e-23 112.1 101 60.4
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 4.5e-23 111.3 98 61.2
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 4.5e-23 111.3 98 61.2
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 5.9e-23 110.9 105 56.2
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.0e-22 110.2 104 58.7
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 1.3e-22 109.8 103 56.3
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.3e-22 109.8 101 56.4
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 1.3e-22 109.8 82 64.6
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 2.2e-22 109.0 103 55.3
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.2e-22 109.0 82 63.4
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.2e-22 109.0 104 55.8
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.2e-22 109.0 88 63.6
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 2.2e-22 109.0 102 54.9
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 2.9e-22 108.6 99 52.5
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 2.9e-22 108.6 103 54.4
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 2.9e-22 108.6 96 58.3
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 3.8e-22 108.2 99 55.6
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.8e-22 108.2 82 63.4
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 5.0e-22 107.8 107 57.0
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 6.5e-22 107.5 105 55.2
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 8.5e-22 107.1 84 64.3
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.5e-22 107.1 82 62.2
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.1e-21 106.7 82 65.9
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.1e-21 106.7 82 62.2
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.1e-21 106.7 100 56.0
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 1.5e-21 106.3 87 63.2
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.5e-21 106.3 97 56.7
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 1.5e-21 106.3 104 54.8
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.5e-21 106.3 82 64.6
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.5e-21 105.5 104 53.8
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 2.5e-21 105.5 110 53.6
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 2.5e-21 105.5 87 60.9
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 3.2e-21 105.1 97 55.7
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.2e-21 105.1 104 53.8
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 3.2e-21 105.1 104 53.8
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 3.2e-21 105.1 87 60.9
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 4.2e-21 104.8 104 53.8
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 4.2e-21 104.8 87 60.9
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 5.5e-21 104.4 104 59.6
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 7.2e-21 104.0 93 53.8
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 7.2e-21 104.0 68 69.1
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 7.2e-21 104.0 96 57.3
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 7.2e-21 104.0 79 62.0
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 7.2e-21 104.0 109 53.2
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 9.4e-21 103.6 83 61.4
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 9.4e-21 103.6 72 66.7
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 9.4e-21 103.6 72 69.4
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.2e-20 103.2 88 54.5
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.2e-20 103.2 74 70.3
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.6e-20 102.8 82 62.2
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.6e-20 102.8 105 53.3
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 2.7e-20 102.1 83 60.2
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 2.7e-20 102.1 84 59.5
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 2.7e-20 102.1 84 59.5
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 2.7e-20 102.1 84 59.5
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 3.6e-20 101.7 101 51.5
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 3.6e-20 101.7 83 60.2
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 3.6e-20 101.7 70 67.1
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 4.7e-20 101.3 83 60.2
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.7e-20 101.3 103 52.4
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 4.7e-20 101.3 105 56.2
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 4.7e-20 101.3 86 58.1
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 6.1e-20 100.9 86 55.8
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 8.0e-20 100.5 83 60.2
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 8.0e-20 100.5 83 60.2
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 8.0e-20 100.5 82 59.8
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 8.0e-20 100.5 82 59.8
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.0e-20 100.5 82 59.8
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 8.0e-20 100.5 83 59.0
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 1.0e-19 100.1 91 53.8
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.0e-19 100.1 72 66.7
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 1.0e-19 100.1 92 54.3
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.4e-19 99.8 83 59.0
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.8e-19 99.4 82 58.5
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.8e-19 99.4 84 58.3
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.8e-19 99.4 103 51.5
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.8e-19 99.4 61 73.8
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 2.3e-19 99.0 86 55.8
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 2.3e-19 99.0 102 52.0
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.3e-19 99.0 98 50.0
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 3.0e-19 98.6 102 53.9
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 3.0e-19 98.6 83 57.8
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 4.0e-19 98.2 105 47.6
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 4.0e-19 98.2 102 52.0
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 5.2e-19 97.8 103 53.4
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 6.8e-19 97.4 85 56.5
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 6.8e-19 97.4 101 50.5
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 6.8e-19 97.4 99 54.5
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 8.8e-19 97.1 66 66.7
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 8.8e-19 97.1 70 65.7
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 8.8e-19 97.1 70 65.7
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.2e-18 96.7 102 52.0
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 1.5e-18 96.3 62 72.6
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 2.0e-18 95.9 104 51.0
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.0e-18 95.9 98 51.0
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 2.6e-18 95.5 79 59.5
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 3.4e-18 95.1 105 49.5
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 5.7e-18 94.4 96 52.1
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 5.7e-18 94.4 68 61.8
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 9.8e-18 93.6 93 51.6
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 6.3e-17 90.9 92 54.3
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 1.1e-16 90.1 71 59.2
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 3.1e-16 88.6 80 52.5
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 4.1e-16 88.2 100 52.0
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 2.0e-15 85.9 80 53.8
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 3.5e-15 85.1 61 65.6
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 4.5e-15 84.7 91 49.5
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 7.7e-15 84.0 71 54.9
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 1.7e-14 82.8 80 55.0
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 5.0e-14 81.3 66 57.6
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 1.1e-13 80.1 81 48.1
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 5.5e-13 77.8 70 54.3
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 5.7e-10 67.8 83 39.8
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 3.7e-09 65.1 55 56.4
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 8.3e-09 63.9 88 38.6
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 3.1e-08 62.0 50 60.0
Hund27727 Selenicereus undatus HOM05D060394 ORTHO05D050910 1.0e-06 57.0 48 62.5
Hund27731 Selenicereus undatus HOM05D060394 ORTHO05D050910 1.0e-06 57.0 48 62.5
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 2.3e-06 55.8 52 51.9


User provided reference genes

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