Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 4.7e-154 547.7 260 100.0
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 2.2e-151 538.9 260 98.5
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 8.6e-116 420.6 260 76.2
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 1.9e-115 419.5 259 74.9
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 5.8e-104 381.3 259 68.0
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 4.9e-103 378.3 304 61.2
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.7e-101 372.5 253 69.6
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 6.0e-101 371.3 260 68.5
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 5.1e-100 368.2 259 65.3
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 2.8e-98 362.5 259 67.6
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 4.8e-98 361.7 260 66.5
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 6.9e-97 357.8 262 63.4
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 9.0e-97 357.5 255 65.5
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 3.4e-96 355.5 255 66.7
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 7.6e-96 354.4 260 64.2
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 9.9e-96 354.0 255 66.3
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 2.9e-95 352.4 253 63.2
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 1.4e-94 350.1 254 64.2
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 7.1e-94 347.8 260 64.2
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 9.3e-94 347.4 260 62.3
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 2.1e-93 346.3 260 64.2
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 6.0e-93 344.7 260 64.2
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 1.3e-92 343.6 257 65.0
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.8e-92 343.2 260 64.2
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 1.8e-92 343.2 255 65.1
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 1.8e-92 343.2 253 64.0
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 1.8e-92 343.2 260 62.7
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 3.0e-92 342.4 260 63.5
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 5.1e-92 341.7 256 66.4
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 8.7e-92 340.9 260 63.5
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 8.7e-92 340.9 260 62.7
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 1.9e-91 339.7 255 63.5
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 1.9e-91 339.7 260 61.2
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 2.5e-91 339.3 260 63.5
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 3.3e-91 339.0 267 62.9
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 3.3e-91 339.0 262 63.7
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 5.6e-91 338.2 260 62.7
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 5.6e-91 338.2 260 62.7
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 7.4e-91 337.8 254 63.8
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 7.4e-91 337.8 254 65.0
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 9.6e-91 337.4 255 64.3
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 9.6e-91 337.4 260 62.3
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 1.3e-90 337.0 260 61.5
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 2.1e-90 336.3 257 61.9
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 4.8e-90 335.1 260 61.9
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 2.4e-89 332.8 260 62.7
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 4.0e-89 332.0 253 63.2
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 5.3e-89 331.6 287 58.2
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 5.3e-89 331.6 252 60.7
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 6.9e-89 331.3 258 60.9
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 1.2e-88 330.5 254 63.4
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 1.2e-88 330.5 254 63.4
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.5e-88 330.1 260 60.0
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 2.6e-88 329.3 213 72.3
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 2.6e-88 329.3 255 60.8
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 4.5e-88 328.6 226 67.3
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 9.9e-88 327.4 260 60.8
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 9.9e-88 327.4 253 61.7
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.3e-87 327.0 253 60.9
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 1.7e-87 326.6 288 58.3
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 1.7e-87 326.6 252 59.9
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 1.7e-87 326.6 274 58.4
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 2.2e-87 326.2 257 58.0
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 2.9e-87 325.9 258 61.6
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 6.4e-87 324.7 254 61.4
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 8.4e-87 324.3 248 60.1
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.1e-86 323.9 253 60.5
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 1.1e-86 323.9 260 60.4
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 1.4e-86 323.6 252 60.3
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 1.9e-86 323.2 255 62.7
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 1.9e-86 323.2 255 63.1
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 2.4e-86 322.8 276 56.5
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 3.2e-86 322.4 265 59.6
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 3.2e-86 322.4 266 59.4
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 3.2e-86 322.4 260 60.0
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 7.1e-86 321.2 255 60.4
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 7.1e-86 321.2 251 60.6
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 9.3e-86 320.9 251 61.8
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.2e-85 320.5 253 60.9
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 1.6e-85 320.1 257 59.1
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 1.6e-85 320.1 260 58.1
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 2.1e-85 319.7 253 61.3
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.7e-85 319.3 253 59.3
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 2.7e-85 319.3 255 58.4
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 3.5e-85 318.9 258 58.5
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 3.5e-85 318.9 255 59.6
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 1.3e-84 317.0 251 60.2
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 1.3e-84 317.0 258 58.9
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 3.0e-84 315.8 256 59.8
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 3.9e-84 315.5 254 57.9
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 6.7e-84 314.7 251 59.4
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 6.7e-84 314.7 255 60.8
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 8.7e-84 314.3 258 59.7
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 1.5e-83 313.5 258 60.1
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 1.5e-83 313.5 255 58.8
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 1.5e-83 313.5 258 58.5
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.9e-83 313.2 251 60.2
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.9e-83 313.2 251 60.2
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 1.9e-83 313.2 269 58.4
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 2.5e-83 312.8 260 59.6
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 5.6e-83 311.6 255 58.8
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 9.6e-83 310.8 300 51.0
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 9.6e-83 310.8 259 58.7
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 1.3e-82 310.5 292 54.8
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 1.3e-82 310.5 254 59.1
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 1.6e-82 310.1 253 58.9
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 4.8e-82 308.5 256 59.0
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 6.2e-82 308.1 260 56.5
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 6.2e-82 308.1 254 58.7
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 8.2e-82 307.8 318 50.6
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 1.1e-81 307.4 257 57.2
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 1.4e-81 307.0 260 55.8
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.4e-81 307.0 260 56.2
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 1.2e-80 303.9 246 59.3
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 5.8e-80 301.6 255 57.3
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 1.0e-79 300.8 180 77.8
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 6.5e-79 298.1 261 57.5
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 5.5e-78 295.0 239 58.6
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 5.5e-78 295.0 239 58.6
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.6e-77 293.5 247 55.5
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 2.7e-77 292.7 251 55.8
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 3.5e-77 292.4 257 56.4
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 6.0e-77 291.6 225 61.3
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 3.9e-76 288.9 255 56.9
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 3.3e-75 285.8 216 63.9
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 2.1e-74 283.1 241 56.8
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 4.8e-74 282.0 260 52.7
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 2.4e-73 279.6 255 52.9
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 3.4e-72 275.8 258 52.3
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 1.7e-71 273.5 260 54.2
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.8e-71 272.3 257 52.9
Zm00001eb294000 Zea mays HOM05D000219 ORTHO05D004649 4.2e-70 268.9 250 50.4
Cfa023086 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.0e-68 264.2 314 42.4
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 1.3e-68 263.8 260 52.3
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.7e-63 246.9 171 68.4
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 2.2e-63 246.5 260 50.8
HPP92_021534 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.6e-61 240.4 177 61.6
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.0e-60 237.7 231 53.7
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 3.9e-60 235.7 213 57.3
SMO146G0027 Selaginella moellendorffii HOM05D000219 ORTHO05D004649 2.6e-59 233.0 266 45.1
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 3.3e-59 232.6 202 55.9
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 3.8e-55 219.2 143 72.0
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 1.5e-51 207.2 207 50.2
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 1.3e-47 194.1 166 58.4
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 9.1e-41 171.4 164 50.6
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.9e-39 166.4 257 42.0
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.7e-34 150.6 144 48.6
Haze_26924 Corylus avellana HOM05D000219 ORTHO05D004649 1.3e-31 141.0 306 29.1
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 5.0e-31 139.0 98 67.3
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 8.0e-29 131.7 112 55.4
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 8.9e-28 128.3 93 66.7
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 4.4e-27 125.9 93 67.7
Cpa.g.c44268 Carica papaya HOM05D000219 ORTHO05D004649 1.6e-24 117.5 71 71.8
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 1.3e-23 114.4 71 70.4
CAN.G555.5 Capsicum annuum HOM05D000219 ORTHO05D000137 3.8e-23 112.8 86 62.8
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.1e-22 111.3 225 34.7
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 2.8e-21 106.7 106 49.1
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 4.7e-21 105.9 72 65.3
Atru.chr10.1695 Acer truncatum HOM05D000219 ORTHO05D021059 8.9e-20 101.7 80 56.2
HanXRQChr10g0318991 Helianthus annuus HOM05D000219 ORTHO05D021059 7.5e-19 98.6 66 66.7
AL4G27720 Arabidopsis lyrata HOM05D000219 ORTHO05D021059 2.9e-18 96.7 94 48.9
PGSC0003DMG400016550 Solanum tuberosum HOM05D000219 ORTHO05D004649 4.9e-18 95.9 76 59.2
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 6.4e-18 95.5 80 58.8
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 3.2e-17 93.2 76 56.6
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 4.6e-16 89.4 54 72.2
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 6.0e-16 89.0 107 47.7
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 7.8e-16 88.6 61 67.2
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 2.5e-14 83.6 91 47.3
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 5.6e-14 82.4 70 60.0
Actinidia05378 Actinidia chinensis HOM05D000219 ORTHO05D004649 1.2e-13 81.3 56 64.3
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 3.1e-12 76.6 59 62.7
PGSC0003DMG400020961 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.3e-10 71.2 49 67.3
Gohir.A03G040550 Gossypium hirsutum HOM05D000219 ORTHO05D021059 2.2e-10 70.5 68 51.5
CARHR125220 Cardamine hirsuta HOM05D000219 ORTHO05D021059 3.7e-10 69.7 73 49.3
C03p38700 Brassica napus HOM05D012973 ORTHO05D016770 9.2e-09 65.1 44 65.9
AagrBONN_evm.TU.Sc2ySwM_228.2935 Anthoceros agrestis HOM05D000219 ORTHO05D021059 1.2e-08 64.7 70 44.3
BcaC05g27999 Brassica carinata HOM05D012973 ORTHO05D016770 1.6e-08 64.3 48 60.4
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 1.6e-08 64.3 73 46.6
C05p40080 Brassica napus HOM05D012973 ORTHO05D016770 1.6e-08 64.3 48 60.4
C09p21500 Brassica napus HOM05D000352 ORTHO05D000260 1.6e-08 64.3 54 61.1
BolC5t32753H Brassica oleracea HOM05D012973 ORTHO05D016770 1.6e-08 64.3 48 60.4
PGSC0003DMG400020960 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.6e-08 64.3 53 54.7
BolC3t16144H Brassica oleracea HOM05D012973 ORTHO05D016770 2.1e-08 63.9 57 54.4
A07p24800 Brassica napus HOM05D000219 ORTHO05D017689 1.7e-07 60.8 73 45.2
BraA03t15335Z Brassica rapa HOM05D000219 ORTHO05D017689 1.7e-07 60.8 73 45.2
C09p23930 Brassica napus HOM05D000219 ORTHO05D017689 2.5e-06 57.0 73 42.5


User provided reference genes

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