Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01123 Aquilegia oxysepala HOM05D007825 ORTHO05D009693 8.8e-39 163.3 92 100.0
Lj5g0027478 Lotus japonicus HOM05D007825 ORTHO05D009693 1.0e-15 86.7 83 61.4
Ca_00897_v3 Cicer arietinum L. HOM05D007825 ORTHO05D009693 1.5e-14 82.8 83 56.6
Rhsim03G0074400 Rhododendron simsii HOM05D001257 ORTHO05D007181 3.4e-14 81.6 97 52.6
GSVIVG01033861001 Vitis vinifera HOM05D007825 ORTHO05D009693 4.4e-14 81.3 100 50.0
Dinv31697 Davidia involucrata HOM05D007825 ORTHO05D009693 5.7e-14 80.9 100 50.0
Glyma.13G154500 Glycine max HOM05D007825 ORTHO05D009693 5.7e-14 80.9 83 60.2
Lalb_Chr10g0096381 Lupinus albus HOM05D007825 ORTHO05D009693 9.8e-14 80.1 85 56.5
TPR.G9902 Trifolium pratense HOM05D007825 ORTHO05D009693 1.3e-13 79.7 83 53.0
Actinidia07924 Actinidia chinensis HOM05D001354 ORTHO05D007486 1.7e-13 79.3 83 55.4
Cc06_g05960 Coffea canephora HOM05D007825 ORTHO05D009693 1.7e-13 79.3 83 55.4
Atru.chr2.2492 Acer truncatum HOM05D007825 ORTHO05D009693 8.3e-13 77.0 81 50.6
Medtr1g059820 Medicago truncatula HOM05D007825 ORTHO05D009693 3.1e-12 75.1 83 54.2
Lalb_Chr02g0154901 Lupinus albus HOM05D007825 ORTHO05D009693 4.1e-12 74.7 83 57.8
arahy.Tifrunner.gnm1.ann1.KBFV5H Arachis hypogaea HOM05D001354 ORTHO05D007486 5.4e-12 74.3 83 54.2
Psat3g207080 Pisum sativum HOM05D007825 ORTHO05D009693 7.0e-12 73.9 83 53.0
Lalb_Chr17g0338831 Lupinus albus HOM05D007825 ORTHO05D009693 9.2e-12 73.6 83 56.6
TWI74G1133 Tripterygium wilfordii HOM05D007825 ORTHO05D009693 2.0e-11 72.4 83 51.8
Potri.016G078700 Populus trichocarpa HOM05D007825 ORTHO05D009693 3.5e-11 71.6 83 48.2
Sabra16G0083000 Salix brachista HOM05D007825 ORTHO05D009693 3.5e-11 71.6 83 47.0
Eucgr.A02998 Eucalyptus grandis HOM05D007825 ORTHO05D009693 4.5e-11 71.2 100 49.0
MD12G1027000 Malus domestica HOM05D007825 ORTHO05D009693 5.9e-11 70.9 83 49.4
Thecc.05G090800 Theobroma cacao HOM05D007825 ORTHO05D009693 5.9e-11 70.9 83 50.6
arahy.Tifrunner.gnm1.ann1.S2NT6M Arachis hypogaea HOM05D007825 ORTHO05D009693 7.8e-11 70.5 79 54.4
Duzib093G1765 Durio zibethinus HOM05D007825 ORTHO05D009693 7.8e-11 70.5 85 50.6
Aqoxy4G02759 Aquilegia oxysepala HOM05D007825 ORTHO05D009693 1.0e-10 70.1 105 45.7
Cpa.g.sc5.6 Carica papaya HOM05D007825 ORTHO05D009693 1.0e-10 70.1 83 51.8
Solyc09g009930.2 Solanum lycopersicum HOM05D007825 ORTHO05D009693 1.3e-10 69.7 86 47.7
TAR633G2289 Trochodendron aralioides HOM05D007825 ORTHO05D009693 1.7e-10 69.3 86 52.3
Potri.006G211600 Populus trichocarpa HOM05D007825 ORTHO05D009693 2.3e-10 68.9 83 45.8
Prupe.7G104600 Prunus persica HOM05D007825 ORTHO05D009693 2.3e-10 68.9 99 49.5
Sopen09g004680 Solanum pennellii HOM05D007825 ORTHO05D009693 2.3e-10 68.9 86 47.7
Glyma.19G194978 Glycine max HOM05D007825 ORTHO05D009693 3.8e-10 68.2 84 50.0
QL07p038635 Quercus lobata HOM05D007825 ORTHO05D009693 3.8e-10 68.2 82 50.0
Sabra06G0163100 Salix brachista HOM05D001354 ORTHO05D007486 5.0e-10 67.8 87 44.8
Glyma.09G026600 Glycine max HOM05D007825 ORTHO05D009693 8.6e-10 67.0 83 55.4
Phvul.001G191100 Phaseolus vulgaris HOM05D007825 ORTHO05D009693 1.1e-09 66.6 84 48.8
THA.LOC104799760 Tarenaya hassleriana HOM05D007825 ORTHO05D009693 1.1e-09 66.6 86 51.2
Nn2g14176 Nelumbo nucifera HOM05D007825 ORTHO05D009693 1.5e-09 66.2 104 48.1
Peaxi162Scf00404g00115 Petunia axillaris HOM05D007825 ORTHO05D009693 4.3e-09 64.7 86 46.5
PGSC0003DMG400008872 Solanum tuberosum HOM05D007825 ORTHO05D009693 5.6e-09 64.3 86 47.7
TAR623G0830 Trochodendron aralioides HOM05D007825 ORTHO05D009693 5.6e-09 64.3 106 44.3
AL5G33400 Arabidopsis lyrata HOM05D007825 ORTHO05D009693 9.5e-09 63.5 84 50.0
Phvul.003G041100 Phaseolus vulgaris HOM05D007825 ORTHO05D009693 9.5e-09 63.5 83 49.4
SalBow3G1626 Salvia bowleyana HOM05D007825 ORTHO05D009693 9.5e-09 63.5 100 42.0
Sc07g0005630 Simmondsia chinensis HOM05D007825 ORTHO05D009693 9.5e-09 63.5 83 50.6
MBI17_g08331_MAGBIO Magnolia biondii HOM05D007825 ORTHO05D009693 1.6e-08 62.8 88 48.9
FAN05G0267 Fragaria x ananassa HOM05D007825 ORTHO05D009693 2.1e-08 62.4 97 46.4
AT3G52620 Arabidopsis thaliana HOM05D007825 ORTHO05D009693 2.8e-08 62.0 84 47.6
MD14G1027100 Malus domestica HOM05D007825 ORTHO05D009693 2.8e-08 62.0 91 47.3
BcaB01g00352 Brassica carinata HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
BcaB02g07824 Brassica carinata HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
BcaC07g39631 Brassica carinata HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
A09p45710 Brassica napus HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
C08p27910 Brassica napus HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
BolC8t50406H Brassica oleracea HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
BraA09t40032Z Brassica rapa HOM05D007825 ORTHO05D009693 4.7e-08 61.2 86 47.7
FAN14G3782 Fragaria x ananassa HOM05D007825 ORTHO05D009693 4.7e-08 61.2 97 44.3
CiPaw.09G015200 Carya illinoinensis HOM05D007825 ORTHO05D009693 8.0e-08 60.5 83 45.8
COL.COLO4_29710 Corchorus olitorius HOM05D007825 ORTHO05D009693 8.0e-08 60.5 87 48.3
Sp5g09670 Schrenkiella parvula HOM05D007825 ORTHO05D009693 8.0e-08 60.5 85 48.2
Thhalv10010896m.g Eutrema salsugineum HOM05D007825 ORTHO05D009693 1.0e-07 60.1 86 47.7
CARHR162440 Cardamine hirsuta HOM05D007825 ORTHO05D009693 1.4e-07 59.7 81 48.1
Glyma.10G074000 Glycine max HOM05D007825 ORTHO05D009693 1.8e-07 59.3 83 50.6
Haze_12107 Corylus avellana HOM05D001354 ORTHO05D007486 3.0e-07 58.5 102 42.2
ATR0776G082 Amborella trichopoda HOM05D007825 ORTHO05D009693 4.0e-07 58.2 87 46.0
Migut.J01022 Erythranthe guttata HOM05D007825 ORTHO05D009693 5.2e-07 57.8 95 40.0
RcHm_v2.0_Chr3g0474201 Rosa chinensis HOM05D007825 ORTHO05D009693 6.8e-07 57.4 98 40.8
FAN02G3309 Fragaria x ananassa HOM05D007825 ORTHO05D009693 1.2e-06 56.6 97 42.3
FAN14G2292 Fragaria x ananassa HOM05D007825 ORTHO05D009693 1.2e-06 56.6 97 42.3
Manes.09G054200 Manihot esculenta HOM05D007825 ORTHO05D009693 1.2e-06 56.6 84 39.3
Aa31LG10G7690 Aethionema arabicum HOM05D007825 ORTHO05D009693 1.5e-06 56.2 85 47.1
EL10Ac7g16903 Beta vulgaris HOM05D007825 ORTHO05D009693 2.0e-06 55.8 84 45.2
arahy.Tifrunner.gnm1.ann1.24RTVW Arachis hypogaea HOM05D007825 ORTHO05D009693 4.4e-06 54.7 83 48.2
arahy.Tifrunner.gnm1.ann1.L43FYW Arachis hypogaea HOM05D007825 ORTHO05D009693 4.4e-06 54.7 83 48.2
Carub.0005s1904 Capsella rubella HOM05D007825 ORTHO05D009693 5.7e-06 54.3 84 45.2
Cfa009073 Carpinus fangiana HOM05D007825 ORTHO05D009693 5.7e-06 54.3 104 42.3
unitig_578.g16364 Utricularia gibba HOM05D001354 ORTHO05D007486 9.8e-06 53.5 88 39.8


User provided reference genes

Program Settings