Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 5.2e-109 397.9 227 100.0
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 1.3e-72 276.9 227 75.8
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 9.6e-71 270.8 184 76.1
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 2.1e-70 269.6 236 69.5
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 9.0e-69 264.2 242 69.8
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 1.0e-67 260.8 180 75.0
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 1.7e-67 260.0 226 72.6
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 3.8e-67 258.8 187 72.7
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 5.0e-67 258.5 227 69.2
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 8.4e-67 257.7 227 70.5
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 1.9e-66 256.5 176 75.0
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 2.5e-66 256.1 191 70.7
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 3.2e-66 255.8 177 72.9
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 3.2e-66 255.8 177 72.9
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 7.1e-66 254.6 226 65.5
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 9.3e-66 254.2 230 66.5
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 2.1e-65 253.1 178 74.7
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 2.1e-65 253.1 247 64.0
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 3.5e-65 252.3 178 73.0
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.3e-64 250.4 186 69.9
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.8e-64 250.0 230 69.6
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.8e-64 250.0 178 73.6
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 2.3e-64 249.6 237 67.1
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 3.9e-64 248.8 187 69.5
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 5.1e-64 248.4 181 70.7
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 6.7e-64 248.1 174 73.0
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 6.7e-64 248.1 186 67.2
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 6.7e-64 248.1 186 68.8
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 6.7e-64 248.1 186 68.8
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 6.7e-64 248.1 187 69.5
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 8.7e-64 247.7 186 72.0
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 1.1e-63 247.3 186 68.3
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 1.1e-63 247.3 177 71.2
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 1.5e-63 246.9 174 72.4
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.5e-63 246.9 181 70.2
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 2.5e-63 246.1 182 69.2
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 3.3e-63 245.7 186 71.5
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 3.3e-63 245.7 248 64.9
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 5.7e-63 245.0 186 65.6
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 5.7e-63 245.0 225 68.9
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 7.4e-63 244.6 176 71.6
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 7.4e-63 244.6 187 67.9
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 9.7e-63 244.2 185 68.6
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 2.2e-62 243.0 219 67.6
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 2.8e-62 242.7 184 68.5
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 4.8e-62 241.9 179 70.9
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 4.8e-62 241.9 134 86.6
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 6.3e-62 241.5 226 59.3
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 6.3e-62 241.5 227 64.3
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.1e-61 240.7 179 68.2
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.8e-61 240.0 227 64.8
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 2.4e-61 239.6 244 63.1
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 4.1e-61 238.8 221 61.1
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 5.3e-61 238.4 176 69.9
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 5.3e-61 238.4 176 68.2
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 5.3e-61 238.4 146 79.5
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 6.9e-61 238.0 186 66.7
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 6.9e-61 238.0 227 69.2
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.2e-60 237.3 182 66.5
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 1.5e-60 236.9 145 79.3
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 2.6e-60 236.1 180 68.9
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 2.6e-60 236.1 187 65.8
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 2.6e-60 236.1 227 67.4
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 4.5e-60 235.3 228 65.8
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 5.9e-60 235.0 185 63.8
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 5.9e-60 235.0 187 65.2
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 3.8e-59 232.3 175 69.7
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 5.0e-59 231.9 150 78.0
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.1e-58 230.7 146 78.8
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 1.4e-58 230.3 138 80.4
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 1.9e-58 229.9 225 63.6
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 2.5e-58 229.6 156 75.0
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 7.2e-58 228.0 147 74.8
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 1.8e-56 223.4 171 66.7
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.5e-55 220.3 186 61.8
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 2.0e-55 219.9 135 77.8
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 2.5e-55 219.5 196 57.7
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 2.5e-55 219.5 196 57.7
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 2.5e-55 219.5 196 59.2
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 9.7e-55 217.6 196 58.2
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.3e-54 217.2 194 57.7
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.3e-54 217.2 194 57.7
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 2.2e-54 216.5 246 49.2
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 4.8e-54 215.3 186 64.0
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 8.2e-54 214.5 239 60.3
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 2.4e-53 213.0 157 70.1
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 2.0e-52 209.9 239 59.8
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 2.2e-51 206.5 197 54.3
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.9e-50 203.4 145 71.0
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 2.6e-47 193.0 138 68.8
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 5.7e-47 191.8 171 59.6
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 5.3e-45 185.3 136 65.4
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 2.0e-44 183.3 187 53.5
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 1.7e-43 180.3 183 53.0
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 6.7e-40 168.3 94 81.9
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 3.1e-37 159.5 115 73.0
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 9.1e-37 157.9 184 51.1
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.6e-36 157.1 145 60.7
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.8e-35 152.5 106 81.1
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 1.9e-34 150.2 142 59.2
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 2.0e-31 140.2 184 62.0
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 2.0e-31 140.2 184 62.0
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 2.8e-30 136.3 184 45.7
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 1.2e-28 131.0 200 42.0
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 2.3e-24 116.7 164 42.1
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 1.7e-19 100.5 71 77.5
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.5e-18 96.7 71 71.8
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 5.6e-18 95.5 109 56.0
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.8e-17 93.2 108 42.6
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 1.3e-14 84.3 55 76.4
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 1.6e-09 67.4 31 87.1
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.1e-09 67.0 31 87.1
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 4.7e-09 65.9 37 86.5
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 4.4e-07 59.3 66 47.0
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 7.5e-07 58.5 52 65.4
EL10Ac8g19171 Beta vulgaris HOM05D006601 ORTHO05D008281 4.9e-06 55.8 25 88.0


User provided reference genes

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