Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 4.9e-143 511.1 261 100.0
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 2.4e-09 67.0 31 87.1
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 4.1e-09 66.2 31 83.9
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 9.2e-09 65.1 34 79.4
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 9.2e-09 65.1 31 83.9
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.2e-08 64.7 31 83.9
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 1.2e-08 64.7 31 83.9
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.2e-08 64.7 31 83.9
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.2e-08 64.7 31 80.6
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 1.2e-08 64.7 31 80.6
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.6e-08 64.3 31 80.6
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.6e-08 64.3 31 80.6
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.6e-08 64.3 31 80.6
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 2.1e-08 63.9 31 83.9
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 2.1e-08 63.9 31 83.9
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 77.4
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 77.4
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 2.7e-08 63.5 31 80.6
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 3.5e-08 63.2 31 80.6
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 3.5e-08 63.2 31 80.6
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.5e-08 63.2 31 80.6
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 3.5e-08 63.2 31 80.6
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 3.5e-08 63.2 31 80.6
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 4.6e-08 62.8 30 80.0
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 80.6
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 4.6e-08 62.8 31 77.4
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 6.0e-08 62.4 31 77.4
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 6.0e-08 62.4 31 77.4
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 6.0e-08 62.4 31 77.4
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 6.0e-08 62.4 32 78.1
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 74.2
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 74.2
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 7.8e-08 62.0 31 77.4
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 77.4
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.0e-07 61.6 31 74.2
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 1.3e-07 61.2 30 80.0
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 74.2
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 74.2
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 74.2
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 74.2
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 77.4
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 77.4
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 77.4
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.3e-07 61.2 31 77.4
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 3.9e-07 59.7 31 74.2
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 3.9e-07 59.7 31 74.2
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 3.9e-07 59.7 31 74.2
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 3.9e-07 59.7 31 74.2
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 3.9e-07 59.7 30 73.3
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 5.1e-07 59.3 31 71.0


User provided reference genes

Program Settings