Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.0e-50 202.2 108 100.0
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.1e-35 153.3 106 81.1
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 9.7e-29 130.2 103 69.9
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 1.8e-27 125.9 103 68.0
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 1.8e-27 125.9 103 68.0
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 4.1e-27 124.8 101 71.3
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 6.9e-27 124.0 102 69.6
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 1.3e-25 119.8 103 66.0
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.2e-25 119.0 102 65.7
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 5.0e-25 117.9 102 65.7
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 5.0e-25 117.9 86 72.1
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 8.5e-25 117.1 100 70.0
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 4.2e-24 114.8 103 64.1
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 4.2e-24 114.8 106 60.4
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 5.5e-24 114.4 102 65.7
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 7.2e-24 114.0 102 65.7
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 3.6e-23 111.7 85 72.9
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 3.6e-23 111.7 102 61.8
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 7.9e-23 110.5 102 62.7
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.0e-22 110.2 102 64.7
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.8e-22 109.4 85 72.9
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.8e-22 109.4 103 60.2
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.8e-22 109.4 103 60.2
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 3.0e-22 108.6 102 62.7
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 3.0e-22 108.6 84 72.6
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 3.9e-22 108.2 101 60.4
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 3.9e-22 108.2 105 61.0
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 3.9e-22 108.2 95 66.3
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 3.9e-22 108.2 95 66.3
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 6.7e-22 107.5 106 60.4
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 6.7e-22 107.5 103 60.2
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 8.8e-22 107.1 89 67.4
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 8.8e-22 107.1 101 61.4
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 8.8e-22 107.1 105 60.0
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.1e-21 106.7 107 58.9
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 2.6e-21 105.5 107 58.9
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 2.6e-21 105.5 73 76.7
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 2.6e-21 105.5 109 57.8
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 3.3e-21 105.1 107 58.9
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 4.4e-21 104.8 85 68.2
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 5.7e-21 104.4 94 62.8
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 5.7e-21 104.4 84 67.9
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 5.7e-21 104.4 73 75.3
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 7.4e-21 104.0 104 55.8
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 9.7e-21 103.6 88 69.3
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 9.7e-21 103.6 94 61.7
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 9.7e-21 103.6 84 70.2
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 9.7e-21 103.6 93 63.4
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 1.3e-20 103.2 101 59.4
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.3e-20 103.2 101 59.4
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 1.3e-20 103.2 105 57.1
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 1.7e-20 102.8 89 65.2
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.2e-20 102.4 101 57.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 2.2e-20 102.4 88 63.6
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 2.8e-20 102.1 107 57.9
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 2.8e-20 102.1 102 58.8
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 3.7e-20 101.7 107 57.0
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 3.7e-20 101.7 94 60.6
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 3.7e-20 101.7 94 60.6
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 6.3e-20 100.9 75 72.0
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 6.3e-20 100.9 75 72.0
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 8.2e-20 100.5 87 64.4
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 8.2e-20 100.5 102 57.8
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 1.4e-19 99.8 97 60.8
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.8e-19 99.4 81 66.7
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 1.8e-19 99.4 107 57.9
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 2.4e-19 99.0 92 60.9
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.4e-19 99.0 89 62.9
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 2.4e-19 99.0 90 60.0
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 2.4e-19 99.0 107 57.9
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.1e-19 98.6 92 60.9
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 4.1e-19 98.2 83 66.3
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 5.3e-19 97.8 102 57.8
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 6.9e-19 97.4 102 57.8
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 6.9e-19 97.4 105 57.1
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 6.9e-19 97.4 83 65.1
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 1.2e-18 96.7 96 59.4
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.2e-18 96.7 104 56.7
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.2e-18 96.7 74 68.9
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 1.2e-18 96.7 94 57.4
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 2.0e-18 95.9 106 53.8
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 2.6e-18 95.5 86 62.8
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 1.0e-17 93.6 74 67.6
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.7e-17 92.8 66 72.7
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 6.5e-17 90.9 86 59.3
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 6.5e-17 90.9 106 52.8
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.1e-16 90.1 90 57.8
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.9e-16 89.4 89 58.4
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 1.9e-16 89.4 89 58.4
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.9e-16 89.4 105 53.3
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 5.5e-16 87.8 105 51.4
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 9.4e-16 87.0 83 61.4
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.6e-15 86.3 71 66.2
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 4.7e-15 84.7 85 57.6
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 8.0e-15 84.0 70 65.7
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 8.0e-15 84.0 101 49.5
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 8.0e-15 84.0 101 49.5
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 1.4e-14 83.2 101 48.5
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.4e-14 83.2 101 48.5
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.4e-14 83.2 101 48.5
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 5.2e-14 81.3 106 47.2
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 6.3e-12 74.3 58 67.2
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 1.1e-11 73.6 105 43.8
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 2.2e-09 65.9 73 46.6
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 4.2e-08 61.6 96 40.6
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.4e-06 56.6 37 78.4


User provided reference genes

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