Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 0.0e+00 1109.0 563 100.0
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 2.5e-245 852.0 565 76.3
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 3.1e-243 845.1 565 75.0
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 5.2e-243 844.3 562 74.7
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 1.2e-242 843.2 565 75.8
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 4.9e-241 837.8 569 74.5
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 4.9e-241 837.8 565 75.4
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 8.4e-241 837.0 564 74.5
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 1.1e-240 836.6 562 75.1
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 1.9e-240 835.9 565 73.5
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 2.4e-240 835.5 564 74.5
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 3.2e-240 835.1 562 75.1
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.6e-239 832.8 566 72.8
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 1.6e-239 832.8 570 73.2
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 2.3e-238 828.9 555 74.8
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 3.0e-238 828.6 565 74.2
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 6.6e-238 827.4 555 74.6
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 6.6e-238 827.4 563 74.1
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 1.9e-237 825.9 549 75.0
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 2.5e-237 825.5 563 73.5
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 2.1e-236 822.4 563 73.2
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 2.1e-236 822.4 560 73.8
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 3.6e-236 821.6 558 73.1
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 3.6e-236 821.6 558 73.1
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 3.6e-236 821.6 554 75.3
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 4.7e-236 821.2 565 73.8
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 6.2e-236 820.8 566 71.9
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 2.4e-235 818.9 566 73.1
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 3.1e-235 818.5 566 73.5
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 5.3e-235 817.8 566 73.0
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 3.4e-234 815.1 556 74.6
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 4.4e-234 814.7 563 71.4
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 5.8e-234 814.3 557 74.0
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 1.3e-233 813.1 632 66.9
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 1.3e-233 813.1 557 73.8
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 2.2e-233 812.4 603 69.5
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 3.8e-233 811.6 557 73.8
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 1.1e-232 810.1 559 72.8
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 2.4e-232 808.9 565 74.0
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 1.2e-231 806.6 564 72.0
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 1.6e-231 806.2 551 73.5
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 3.5e-231 805.1 559 72.3
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 2.3e-230 802.4 545 75.0
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 5.1e-230 801.2 563 72.3
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 6.6e-230 800.8 565 71.9
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.1e-229 800.0 563 71.9
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 1.9e-229 799.3 565 71.7
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 3.3e-229 798.5 565 71.7
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 4.3e-229 798.1 549 73.0
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 7.3e-229 797.3 578 70.9
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 1.3e-228 796.6 565 71.2
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 4.8e-228 794.7 564 71.1
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 6.2e-228 794.3 548 72.8
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 8.1e-228 793.9 565 71.2
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 2.4e-227 792.3 563 71.0
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 2.4e-227 792.3 568 70.1
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 3.1e-227 792.0 552 71.7
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 6.9e-227 790.8 567 69.3
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 9.0e-227 790.4 565 71.0
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 1.2e-226 790.0 565 69.7
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 1.5e-226 789.6 564 70.4
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 1.5e-226 789.6 604 67.5
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 2.2e-225 785.8 554 71.3
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 3.8e-225 785.0 586 69.3
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 6.4e-225 784.3 565 70.4
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 3.2e-224 781.9 585 68.9
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 4.2e-224 781.6 565 70.3
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 3.5e-223 778.5 563 68.4
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 1.0e-222 776.9 566 71.0
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 8.7e-222 773.9 558 69.9
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 1.1e-221 773.5 573 68.8
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.5e-221 773.1 547 70.6
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 1.5e-221 773.1 556 70.5
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 1.9e-221 772.7 554 69.7
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 4.3e-221 771.5 553 69.3
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 5.6e-221 771.2 551 71.0
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 9.6e-221 770.4 553 69.1
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 9.6e-221 770.4 542 71.4
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 2.1e-220 769.2 554 69.1
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 2.8e-220 768.8 555 70.8
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 2.8e-220 768.8 558 69.4
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 3.7e-220 768.5 551 70.6
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 4.8e-220 768.1 552 69.4
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 4.8e-220 768.1 552 69.4
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 6.2e-220 767.7 553 68.7
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 1.4e-219 766.5 552 69.2
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 1.4e-219 766.5 554 69.5
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 1.8e-219 766.1 555 70.1
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 2.4e-219 765.8 558 67.9
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 2.4e-219 765.8 563 68.9
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 3.1e-219 765.4 550 68.9
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 5.8e-218 761.1 571 68.1
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 1.7e-217 759.6 557 68.2
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 3.8e-217 758.4 560 68.0
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 1.1e-216 756.9 555 67.2
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 1.9e-216 756.1 552 69.4
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 2.5e-216 755.7 562 68.1
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 5.5e-216 754.6 562 67.6
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 1.2e-215 753.4 557 69.3
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 3.9e-214 748.4 537 71.1
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 6.7e-214 747.7 565 67.6
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.7e-214 747.3 619 64.0
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 4.3e-213 745.0 565 67.4
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 5.6e-213 744.6 552 68.1
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 9.6e-213 743.8 535 69.5
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 3.7e-212 741.9 601 64.6
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.8e-211 739.6 554 68.2
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 3.1e-211 738.8 553 68.7
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 6.5e-209 731.1 520 70.6
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 1.4e-208 729.9 548 66.8
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 2.3e-206 722.6 632 60.4
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 1.5e-205 719.9 556 65.1
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 5.7e-205 718.0 566 65.4
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 1.7e-201 706.4 563 65.4
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 9.4e-200 700.7 565 63.5
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 8.8e-198 694.1 567 63.5
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 2.0e-194 682.9 478 71.8
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 2.0e-194 682.9 578 61.6
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 2.3e-190 669.5 504 64.7
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 1.7e-188 663.3 561 58.5
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 3.7e-188 662.1 453 73.3
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 1.1e-184 650.6 478 67.8
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 2.2e-180 636.3 479 67.0
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 4.1e-179 632.1 547 58.5
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 5.7e-173 611.7 552 55.6
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 1.4e-163 580.5 417 70.5
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 2.7e-162 576.2 367 76.6
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 8.3e-156 554.7 400 68.2
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 1.1e-155 554.3 397 68.5
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 9.2e-155 551.2 400 68.0
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 1.9e-147 526.9 359 75.2
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 2.3e-137 493.4 556 47.3
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 3.5e-130 469.5 532 46.6
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 3.8e-124 449.5 337 67.4
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 2.2e-108 397.1 272 71.7
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 4.9e-108 396.0 271 71.6
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 9.0e-94 348.6 220 75.0
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 2.6e-77 293.9 195 69.7
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 4.1e-70 270.0 200 70.5
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 4.5e-61 240.0 194 65.5
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 7.5e-48 196.1 141 69.5
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 1.0e-44 185.7 152 59.2
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 3.3e-43 180.6 147 63.3
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 4.0e-41 173.7 117 71.8
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 8.3e-39 166.0 189 50.8
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 8.6e-28 129.4 91 74.7
Lj1C257T9 Lonicera japonica HOM05D004765 ORTHO05D030006 3.3e-27 127.5 103 63.1
QL04p027443 Quercus lobata HOM05D004765 ORTHO05D030006 1.4e-25 122.1 83 73.5
SEGI_24377 Sequoiadendron giganteum HOM05D004765 ORTHO05D030006 7.5e-24 116.3 92 62.0
Sc12g0004650 Simmondsia chinensis HOM05D004765 ORTHO05D030006 2.2e-23 114.8 89 65.2
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 4.7e-18 97.1 133 43.6
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 1.1e-17 95.9 72 58.3
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 2.5e-11 74.7 55 61.8


User provided reference genes

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