Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 4.0e-137 491.5 264 100.0
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 5.3e-121 438.0 264 86.7
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.1e-118 430.3 258 86.8
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.4e-118 429.9 258 86.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 1.9e-118 429.5 258 86.8
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 9.4e-118 427.2 259 86.5
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 3.6e-117 425.2 255 85.9
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 4.6e-117 424.9 260 85.0
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 6.1e-117 424.5 258 85.7
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.4e-116 423.3 264 83.7
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.8e-116 422.9 259 85.7
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.8e-116 422.9 259 85.7
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.8e-116 422.9 259 86.1
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.0e-116 422.2 258 86.0
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.9e-116 421.8 257 86.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 5.1e-116 421.4 259 84.9
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 5.1e-116 421.4 264 83.3
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 6.7e-116 421.0 258 84.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 1.1e-115 420.2 255 83.5
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.5e-115 419.1 255 84.7
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 2.5e-115 419.1 258 84.1
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.5e-115 419.1 259 84.2
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 2.5e-115 419.1 264 83.0
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.5e-115 419.1 254 84.3
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.3e-115 418.7 258 84.9
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 3.3e-115 418.7 258 84.9
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 4.3e-115 418.3 255 84.3
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 4.3e-115 418.3 259 84.6
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 4.3e-115 418.3 256 84.4
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.4e-115 417.5 259 83.8
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 9.7e-115 417.2 261 83.9
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 9.7e-115 417.2 259 83.4
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.3e-114 416.8 259 83.8
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.3e-114 416.8 257 82.5
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 1.3e-114 416.8 259 84.6
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.2e-114 416.0 255 83.9
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.2e-114 416.0 258 84.5
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.8e-114 415.6 259 83.8
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 2.8e-114 415.6 259 84.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.7e-114 415.2 265 82.3
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.7e-114 415.2 259 83.8
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 3.7e-114 415.2 254 86.2
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.8e-114 414.8 259 83.0
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 8.2e-114 414.1 258 82.9
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 8.2e-114 414.1 255 83.1
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.1e-113 413.7 255 82.7
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.1e-113 413.7 254 83.5
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.4e-113 413.3 258 84.1
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.4e-113 413.3 258 84.1
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.8e-113 412.9 254 83.1
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.1e-113 412.1 255 82.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 4.1e-113 411.8 253 84.2
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 4.1e-113 411.8 272 80.9
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 4.1e-113 411.8 258 84.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 4.1e-113 411.8 265 80.8
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 6.9e-113 411.0 257 82.5
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 6.9e-113 411.0 264 81.1
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 9.1e-113 410.6 255 81.6
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 9.1e-113 410.6 257 82.9
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.5e-112 409.8 259 80.7
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 2.6e-112 409.1 255 82.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 3.4e-112 408.7 258 83.7
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 5.9e-112 407.9 256 83.6
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 2.2e-111 406.0 257 80.9
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 2.2e-111 406.0 253 86.2
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.9e-111 405.6 255 82.7
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 2.9e-111 405.6 255 82.7
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 5.0e-111 404.8 255 81.2
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.1e-110 403.7 255 80.4
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.4e-110 403.3 257 80.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.4e-110 403.3 258 82.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.9e-110 402.9 255 80.4
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.5e-110 402.5 255 80.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 3.2e-110 402.1 257 82.5
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 1.2e-109 400.2 253 83.4
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.6e-109 399.8 255 80.0
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.6e-109 399.8 255 80.0
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 2.7e-109 399.1 255 79.6
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 3.6e-109 398.7 260 81.5
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 3.6e-109 398.7 257 80.5
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 3.6e-109 398.7 257 80.5
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 6.1e-109 397.9 257 80.5
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 1.0e-108 397.1 255 80.0
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 3.9e-108 395.2 257 78.6
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 3.9e-108 395.2 257 79.0
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 3.9e-108 395.2 260 78.1
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.9e-108 395.2 241 85.9
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 5.1e-108 394.8 257 78.6
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 5.1e-108 394.8 255 78.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 5.1e-108 394.8 255 78.8
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 6.7e-108 394.4 253 79.1
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.8e-108 394.0 259 78.4
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.5e-107 393.3 260 80.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 2.0e-107 392.9 257 79.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.3e-106 390.2 251 80.1
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 5.3e-105 384.8 258 77.9
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 7.0e-105 384.4 279 76.0
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.6e-104 383.3 251 79.3
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.0e-104 382.9 225 88.0
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 3.8e-103 378.6 257 76.7
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 5.0e-103 378.3 280 73.9
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 9.4e-102 374.0 258 74.4
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 9.4e-102 374.0 260 73.8
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 9.4e-102 374.0 225 85.8
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.3e-100 369.4 259 72.2
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.5e-99 366.7 233 83.3
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.5e-99 364.4 257 74.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.2e-98 362.8 254 73.6
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.8e-98 361.7 258 72.1
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.5e-96 355.5 260 68.8
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.9e-95 352.4 254 69.7
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.6e-93 346.7 260 74.2
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.2e-90 336.3 262 66.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.1e-86 323.9 194 88.1
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.8e-84 316.6 212 78.8
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.3e-82 310.5 252 65.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-68 262.3 255 52.2
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.9e-66 255.4 160 81.9
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.4e-65 253.8 150 88.0
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 9.2e-65 251.1 179 71.5
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.9e-62 243.4 258 57.4
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.9e-57 226.9 154 78.6
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.7e-50 203.8 235 44.3
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.5e-46 190.7 259 48.6
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.5e-46 190.7 251 41.8
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.4e-41 173.3 240 41.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 2.9e-34 149.8 95 78.9
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.7e-32 143.3 96 77.1
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-31 141.0 77 94.8
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.3e-31 140.2 240 32.9
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.6e-29 132.9 75 92.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 2.6e-27 126.7 117 59.0
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 2.4e-25 120.2 241 33.2
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 6.0e-24 115.5 101 67.3
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 5.0e-10 69.3 71 59.2


User provided reference genes

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