Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 7.2e-104 380.6 189 100.0
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 5.5e-88 327.8 189 86.2
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 2.6e-77 292.4 189 75.7
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 7.5e-77 290.8 189 75.1
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 1.7e-76 289.7 189 75.1
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 2.8e-76 288.9 189 74.6
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 1.1e-75 287.0 188 74.5
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 1.1e-75 287.0 188 74.5
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 1.4e-75 286.6 189 74.1
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 1.4e-75 286.6 189 72.5
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 2.0e-74 282.7 189 72.5
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 2.0e-74 282.7 187 74.3
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 2.7e-74 282.3 189 70.9
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 2.7e-74 282.3 189 72.0
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 7.8e-74 280.8 189 71.4
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 7.8e-74 280.8 189 71.4
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 7.8e-74 280.8 189 71.4
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 1.0e-73 280.4 189 72.0
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.9e-73 278.9 184 72.8
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.9e-73 278.9 184 72.8
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 3.8e-73 278.5 189 70.4
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 5.0e-73 278.1 204 67.6
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 6.6e-73 277.7 187 72.7
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 6.6e-73 277.7 188 73.4
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 2.5e-72 275.8 187 73.8
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 4.3e-72 275.0 189 72.5
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-71 273.1 186 71.5
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-71 273.1 186 71.5
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 2.8e-71 272.3 207 66.2
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 2.8e-71 272.3 187 72.2
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 2.8e-71 272.3 189 70.9
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 8.0e-71 270.8 189 71.4
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 1.4e-70 270.0 187 71.1
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 3.1e-70 268.9 189 69.3
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 3.1e-70 268.9 186 71.0
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 5.2e-70 268.1 182 70.3
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 5.2e-70 268.1 189 70.4
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 6.8e-70 267.7 184 70.7
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 6.8e-70 267.7 187 68.4
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 6.8e-70 267.7 187 71.1
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 6.8e-70 267.7 189 68.3
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 1.5e-69 266.5 189 67.2
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 3.4e-69 265.4 187 70.6
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 7.5e-69 264.2 189 70.4
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 1.3e-68 263.5 189 69.8
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.7e-68 263.1 186 69.4
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 3.7e-68 261.9 182 72.0
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 3.7e-68 261.9 189 69.3
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 6.4e-68 261.2 187 70.6
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 1.9e-67 259.6 188 69.1
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 2.4e-67 259.2 182 68.7
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 3.2e-67 258.8 186 68.8
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 5.4e-67 258.1 186 68.8
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 9.2e-67 257.3 152 81.6
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 2.0e-66 256.1 182 68.7
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 2.0e-66 256.1 209 63.6
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 3.5e-66 255.4 184 68.5
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 3.5e-66 255.4 182 67.0
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 7.8e-66 254.2 187 66.8
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 8.6e-65 250.8 189 65.6
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.1e-64 250.4 189 67.2
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.5e-64 250.0 189 66.7
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 1.5e-64 250.0 189 66.7
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 1.5e-64 250.0 182 67.6
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 4.3e-64 248.4 187 64.2
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 4.3e-64 248.4 189 66.1
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 5.6e-64 248.1 203 63.1
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 7.3e-64 247.7 187 64.7
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 7.3e-64 247.7 182 67.6
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 9.5e-64 247.3 203 62.6
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 9.5e-64 247.3 189 64.6
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 2.1e-63 246.1 182 64.3
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 6.2e-63 244.6 182 65.9
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 6.2e-63 244.6 189 64.0
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 1.1e-62 243.8 175 66.9
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 2.3e-62 242.7 189 65.1
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 4.0e-62 241.9 187 64.2
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 6.8e-62 241.1 183 65.6
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 8.9e-62 240.7 187 65.2
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 8.9e-62 240.7 177 67.2
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 8.9e-62 240.7 182 64.8
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 2.0e-61 239.6 208 61.1
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 3.4e-61 238.8 182 63.2
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 4.4e-61 238.4 187 64.7
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 5.8e-61 238.0 155 74.8
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 1.7e-60 236.5 176 64.2
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 2.9e-60 235.7 174 66.7
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 6.4e-60 234.6 174 64.9
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 5.4e-59 231.5 180 62.2
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 7.0e-59 231.1 271 49.1
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 7.0e-59 231.1 189 60.8
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 9.2e-59 230.7 177 65.0
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 9.2e-59 230.7 174 64.4
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 1.0e-57 227.3 182 59.3
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 1.3e-57 226.9 182 63.2
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 1.5e-56 223.4 156 73.1
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 4.3e-56 221.9 156 69.2
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 9.5e-56 220.7 174 62.1
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 1.2e-55 220.3 174 61.5
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 1.9e-51 206.5 181 53.6
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 1.6e-50 203.4 187 54.0
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 2.1e-50 203.0 182 53.8
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.1e-50 203.0 191 54.5
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 1.0e-49 200.7 187 53.5
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 3.9e-49 198.7 182 53.3
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 6.6e-49 198.0 187 52.9
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 3.3e-48 195.7 187 52.9
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 1.6e-47 193.4 182 52.7
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 4.7e-47 191.8 176 60.2
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 1.1e-46 190.7 207 50.7
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 3.1e-46 189.1 187 52.9
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 1.2e-45 187.2 187 52.9
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 4.9e-44 181.8 187 51.3
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 1.1e-43 180.6 182 56.6
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 1.4e-43 180.3 187 50.8
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 1.4e-43 180.3 187 50.8
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 1.4e-43 180.3 187 50.8
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 6.0e-42 174.9 187 49.2
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 5.1e-41 171.8 187 48.1
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 5.1e-41 171.8 187 48.1
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 4.0e-38 162.2 148 55.4
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 2.0e-37 159.8 106 75.5
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 9.3e-35 151.0 155 55.5
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 2.5e-32 142.9 187 44.4
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.4e-27 127.1 111 59.5
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 1.3e-25 120.6 102 63.7
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 1.8e-25 120.2 78 69.2
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 8.1e-23 111.3 89 62.9
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 1.4e-22 110.5 84 67.9
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 6.9e-22 108.2 155 40.6
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 2.0e-21 106.7 80 70.0
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 8.4e-20 101.3 74 59.5
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 2.5e-19 99.8 151 41.1
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 4.2e-19 99.0 78 64.1
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 5.5e-19 98.6 77 64.9
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.6e-18 97.1 76 63.2
RcHm_v2.0_Chr7g0220351 Rosa chinensis HOM05D005262 ORTHO05D006590 4.6e-18 95.5 74 62.2
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 1.3e-17 94.0 159 33.3
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 3.9e-17 92.4 166 34.3
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.0e-12 77.8 66 65.2
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 3.8e-12 75.9 84 51.2
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 9.3e-11 71.2 88 51.1
Zm00001eb076020 Zea mays HOM05D005262 ORTHO05D444176 5.3e-06 55.5 45 57.8


User provided reference genes

Program Settings