Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 4.9e-97 357.8 187 100.0
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 5.9e-50 201.4 184 59.8
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 1.5e-48 196.8 184 55.4
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 1.5e-48 196.8 174 56.9
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 3.2e-48 195.7 194 52.1
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 4.7e-47 191.8 176 56.2
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 6.1e-47 191.4 175 60.0
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 8.0e-47 191.0 186 53.8
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 3.0e-46 189.1 174 55.2
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 3.1e-43 179.1 181 50.8
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 4.1e-43 178.7 189 51.3
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 3.5e-42 175.6 176 52.8
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 4.5e-42 175.3 188 50.0
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 4.5e-42 175.3 158 57.0
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 5.9e-42 174.9 185 51.4
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 1.0e-41 174.1 182 50.5
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 1.3e-41 173.7 181 54.7
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.7e-41 173.3 187 50.8
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 1.7e-41 173.3 180 49.4
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 2.3e-41 172.9 178 50.6
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 2.3e-41 172.9 188 51.1
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 2.3e-41 172.9 176 51.1
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 6.6e-41 171.4 176 52.3
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 1.5e-40 170.2 188 48.9
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.5e-40 170.2 188 48.9
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 1.9e-40 169.9 176 50.0
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 1.9e-40 169.9 176 51.1
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 1.9e-40 169.9 180 49.4
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 3.3e-40 169.1 177 52.0
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 9.5e-40 167.5 185 47.6
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 1.2e-39 167.2 197 47.7
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 2.1e-39 166.4 179 50.8
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 2.1e-39 166.4 176 49.4
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 2.8e-39 166.0 184 48.9
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 4.7e-39 165.2 178 52.8
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 6.1e-39 164.9 187 48.7
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 6.1e-39 164.9 133 61.7
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 8.0e-39 164.5 188 48.4
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 2.3e-38 162.9 181 48.6
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 3.0e-38 162.5 239 42.7
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 4.0e-38 162.2 187 47.1
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 4.0e-38 162.2 174 52.3
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 4.0e-38 162.2 187 47.6
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 6.8e-38 161.4 187 49.7
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 6.8e-38 161.4 187 46.5
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 1.2e-37 160.6 169 50.9
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 3.4e-37 159.1 185 51.9
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 1.7e-36 156.8 173 50.3
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 2.9e-36 156.0 177 50.8
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 8.3e-36 154.5 210 43.8
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 2.4e-35 152.9 160 50.6
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 2.4e-35 152.9 177 47.5
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 2.4e-35 152.9 181 46.4
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 3.2e-35 152.5 180 46.7
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 5.4e-35 151.8 180 45.6
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 7.0e-35 151.4 183 44.3
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 9.2e-35 151.0 177 47.5
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 9.2e-35 151.0 165 46.1
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 1.2e-34 150.6 164 49.4
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 1.0e-33 147.5 174 46.0
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 1.3e-33 147.1 187 42.8
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 1.3e-33 147.1 174 45.4
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 3.9e-33 145.6 177 44.1
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 5.0e-33 145.2 222 43.2
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 1.9e-32 143.3 136 50.0
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 1.9e-32 143.3 118 61.0
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 4.3e-32 142.1 158 47.5
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 7.3e-32 141.4 137 52.6
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 1.2e-31 140.6 174 44.8
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 1.2e-31 140.6 175 45.7
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 1.6e-31 140.2 174 43.7
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 2.1e-31 139.8 174 45.4
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 2.1e-31 139.8 174 44.3
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 8.0e-31 137.9 174 43.7
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 1.0e-30 137.5 174 43.1
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 1.4e-30 137.1 174 42.5
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 1.4e-30 137.1 135 50.4
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 1.8e-30 136.7 178 43.3
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 2.3e-30 136.3 174 43.7
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 5.2e-30 135.2 133 53.4
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 2.0e-29 133.3 184 42.9
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 5.8e-29 131.7 178 41.6
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 1.3e-28 130.6 127 55.1
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 1.4e-27 127.1 143 50.3
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 3.2e-27 125.9 198 37.9
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 4.1e-27 125.6 195 40.0
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 5.4e-27 125.2 183 43.7
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 7.0e-27 124.8 198 37.9
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 1.0e-25 120.9 261 34.9
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 2.5e-24 116.3 175 42.9
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 1.2e-23 114.0 134 44.0
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 3.6e-23 112.5 190 38.4
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 8.1e-23 111.3 170 42.9
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 1.8e-22 110.2 123 47.2
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 1.8e-22 110.2 123 47.2
unitig_94.g28350 Utricularia gibba HOM05D007204 ORTHO05D008593 2.6e-21 106.3 149 40.9
SEGI_02179 Sequoiadendron giganteum HOM05D056589 ORTHO05D008593 1.3e-20 104.0 171 36.8
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 1.2e-18 97.4 176 35.8
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 7.8e-18 94.7 91 54.9
Zm00001eb025660 Zea mays HOM05D007204 ORTHO05D008593 9.2e-11 71.2 93 44.1
SMO358G0161 Selaginella moellendorffii HOM05D007204 ORTHO05D008593 2.3e-09 66.6 100 39.0
Sopen06g033710 Solanum pennellii HOM05D007204 ORTHO05D008593 8.6e-09 64.7 77 45.5
TPR.G22099 Trifolium pratense HOM05D007204 ORTHO05D008593 8.6e-09 64.7 117 37.6
Ca_05090_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 1.6e-07 60.5 89 38.2
Ca_14995_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 1.6e-07 60.5 89 38.2


User provided reference genes

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