Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 8.6e-211 736.9 413 100.0
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 9.4e-165 583.9 397 81.9
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 7.9e-164 580.9 399 81.0
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 5.1e-163 578.2 386 81.1
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 4.8e-161 571.6 394 79.2
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 8.2e-161 570.9 397 79.6
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 4.1e-160 568.5 396 79.3
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 6.9e-160 567.8 394 79.2
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 1.2e-159 567.0 385 81.0
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 2.6e-159 565.8 381 80.8
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 7.7e-159 564.3 393 78.4
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 1.7e-158 563.1 400 77.8
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 6.5e-158 561.2 386 79.3
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 8.5e-158 560.8 396 78.8
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 1.4e-157 560.1 385 79.0
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 1.9e-157 559.7 385 78.7
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 4.2e-157 558.5 385 78.7
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 2.7e-156 555.8 392 78.1
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 7.9e-156 554.3 404 75.2
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 2.3e-155 552.7 397 76.6
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 3.9e-155 552.0 400 77.0
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 5.1e-155 551.6 382 79.1
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 5.1e-155 551.6 395 75.7
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 1.5e-154 550.1 395 77.5
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 2.6e-154 549.3 391 78.5
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 2.6e-154 549.3 351 83.2
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 2.6e-154 549.3 396 75.0
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 2.6e-154 549.3 389 78.4
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 2.6e-154 549.3 381 76.6
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 2.6e-154 549.3 389 77.9
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 4.4e-154 548.5 390 75.6
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 5.7e-154 548.1 367 80.7
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 5.7e-154 548.1 382 78.3
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 7.4e-154 547.7 383 77.8
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 7.4e-154 547.7 390 76.4
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 9.7e-154 547.4 399 75.7
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 9.7e-154 547.4 398 74.6
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 9.7e-154 547.4 380 76.8
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 1.3e-153 547.0 388 76.3
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 1.3e-153 547.0 397 75.1
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 1.7e-153 546.6 386 77.5
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 2.2e-153 546.2 380 76.6
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 3.7e-153 545.4 397 75.3
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 4.8e-153 545.0 396 74.7
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 4.8e-153 545.0 389 75.8
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 4.8e-153 545.0 381 78.2
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 4.8e-153 545.0 317 89.3
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 6.3e-153 544.7 387 77.0
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 1.4e-152 543.5 344 84.0
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 1.8e-152 543.1 389 75.6
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 1.8e-152 543.1 390 75.1
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 1.8e-152 543.1 390 75.1
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 1.8e-152 543.1 387 76.2
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 2.4e-152 542.7 391 77.7
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 3.1e-152 542.3 394 75.1
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 3.1e-152 542.3 402 73.9
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 5.3e-152 541.6 383 76.5
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 5.3e-152 541.6 380 77.4
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 7.0e-152 541.2 383 76.2
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 1.2e-151 540.4 384 77.6
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.2e-151 540.4 377 79.3
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 1.6e-151 540.0 381 77.7
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 2.0e-151 539.7 387 75.5
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 2.6e-151 539.3 384 76.8
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 3.5e-151 538.9 390 74.4
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 4.5e-151 538.5 394 74.6
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 4.5e-151 538.5 421 72.9
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 5.9e-151 538.1 390 75.6
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 1.3e-150 537.0 394 73.9
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.3e-150 537.0 383 75.7
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 1.7e-150 536.6 394 74.9
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 1.7e-150 536.6 384 76.6
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 2.2e-150 536.2 391 75.7
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 2.9e-150 535.8 391 75.4
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.9e-150 535.8 410 71.7
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 3.8e-150 535.4 391 75.4
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.0e-150 535.0 403 72.7
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 6.5e-150 534.6 397 74.3
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 8.5e-150 534.3 403 72.5
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.5e-149 533.5 412 71.6
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.5e-149 533.5 412 71.6
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 2.5e-149 532.7 365 78.6
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 2.5e-149 532.7 365 78.6
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 4.2e-149 531.9 384 74.2
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 7.2e-149 531.2 384 73.4
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 1.2e-148 530.4 397 73.0
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 2.1e-148 529.6 374 77.0
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 6.1e-148 528.1 389 74.6
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 8.0e-148 527.7 385 73.0
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 1.4e-147 526.9 351 80.1
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 2.3e-147 526.2 389 74.0
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 3.0e-147 525.8 381 74.8
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 7.5e-146 521.2 389 74.8
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 1.3e-145 520.4 381 74.3
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 2.2e-145 519.6 315 84.1
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 6.3e-145 518.1 389 72.8
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 6.3e-145 518.1 317 83.3
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 1.4e-144 516.9 340 79.7
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 1.8e-144 516.5 393 73.8
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 4.1e-144 515.4 389 73.3
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 5.3e-144 515.0 393 73.0
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 7.0e-144 514.6 343 79.0
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 9.1e-144 514.2 386 72.0
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 2.7e-143 512.7 343 79.9
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 1.0e-142 510.8 297 89.2
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 2.5e-141 506.1 374 74.1
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 2.5e-141 506.1 315 81.6
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 2.7e-140 502.7 297 87.5
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 2.7e-140 502.7 414 68.6
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 8.0e-140 501.1 382 72.8
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 1.5e-138 496.9 297 85.2
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 2.0e-138 496.5 390 70.0
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 7.5e-138 494.6 387 71.8
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 1.3e-137 493.8 307 82.7
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 6.3e-137 491.5 382 72.0
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 7.0e-136 488.0 315 79.0
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 5.0e-134 481.9 392 67.6
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 3.4e-130 469.2 298 81.5
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 6.3e-129 464.9 340 74.7
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 4.1e-128 462.2 319 74.0
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 4.1e-128 462.2 307 76.9
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 1.2e-127 460.7 333 75.4
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 1.2e-122 444.1 364 66.5
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 2.4e-120 436.4 391 65.5
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 3.6e-116 422.5 246 89.4
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.4e-115 420.6 388 66.5
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 1.1e-112 411.0 272 80.5
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 1.6e-111 407.1 316 67.7
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 1.2e-106 391.0 289 68.9
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 1.5e-106 390.6 362 58.6
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 1.5e-106 390.6 339 67.0
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 9.2e-96 354.8 312 60.3
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 3.3e-93 346.3 198 90.4
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 5.1e-78 295.8 198 78.8
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 5.1e-78 295.8 198 78.8
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 7.1e-72 275.4 166 84.3
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 3.8e-65 253.1 386 45.9
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 5.5e-64 249.2 294 47.3
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 1.6e-55 221.1 293 43.7
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 3.3e-53 213.4 332 41.3
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 4.3e-53 213.0 138 81.9
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 5.7e-53 212.6 154 75.3
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 2.9e-49 200.3 178 64.0
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 3.3e-45 186.8 208 58.7
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 6.7e-38 162.5 149 61.1
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 5.7e-37 159.5 213 48.8
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 3.6e-31 140.2 136 61.8
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 1.7e-28 131.3 80 82.5
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 4.0e-22 110.2 71 74.6
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 3.1e-19 100.5 75 70.7
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 1.4e-14 85.1 47 89.4
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 2.0e-13 81.3 85 54.1
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 4.1e-11 73.6 62 64.5
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 1.2e-10 72.0 43 81.4
COL.COLO4_37924 Corchorus olitorius HOM05D004740 ORTHO05D005991 2.5e-08 64.3 61 60.7
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 3.3e-08 63.9 42 64.3


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