Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.0e-97 360.1 190 100.0
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 1.3e-57 226.9 194 64.4
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 7.3e-56 221.1 191 64.4
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.6e-55 219.9 187 64.2
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 3.6e-55 218.8 187 64.7
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 4.8e-55 218.4 191 62.8
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 8.1e-55 217.6 194 64.4
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 1.4e-54 216.9 185 63.2
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 2.4e-54 216.1 188 63.3
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 2.4e-54 216.1 196 66.3
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.4e-54 216.1 189 64.0
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 6.9e-54 214.5 193 62.7
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 1.5e-53 213.4 188 62.8
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.4e-53 212.2 190 63.7
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 4.4e-53 211.8 187 62.6
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 4.4e-53 211.8 190 63.7
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 9.9e-53 210.7 183 62.8
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 1.3e-52 210.3 187 62.6
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 1.7e-52 209.9 190 63.2
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.7e-52 209.9 187 61.0
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 2.2e-52 209.5 183 61.2
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 2.2e-52 209.5 162 68.5
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.9e-52 209.1 183 62.3
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 1.4e-51 206.8 188 62.2
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.4e-51 206.8 188 62.8
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 1.9e-51 206.5 186 62.4
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 1.2e-50 203.8 153 69.3
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.2e-50 203.8 167 66.5
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.6e-50 203.4 183 65.6
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 2.1e-50 203.0 198 60.1
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 2.7e-50 202.6 131 78.6
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 7.9e-50 201.1 151 70.2
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 1.3e-49 200.3 174 63.8
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 1.7e-49 199.9 196 61.7
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 2.3e-49 199.5 186 60.8
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 3.0e-49 199.1 174 63.2
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 3.9e-49 198.7 147 67.3
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 3.9e-49 198.7 153 69.3
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 3.9e-49 198.7 148 71.6
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 8.7e-49 197.6 183 59.6
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 8.7e-49 197.6 131 75.6
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 8.7e-49 197.6 198 58.1
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.1e-48 197.2 150 68.0
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.1e-48 197.2 150 68.0
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.5e-48 196.8 195 61.5
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 1.5e-48 196.8 131 74.8
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 3.3e-48 195.7 131 74.8
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 3.3e-48 195.7 169 66.3
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 3.3e-48 195.7 157 66.2
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 4.3e-48 195.3 191 61.3
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 5.6e-48 194.9 131 75.6
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 9.6e-48 194.1 131 73.3
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 1.6e-47 193.4 131 72.5
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.6e-47 193.4 153 66.7
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 2.8e-47 192.6 131 73.3
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 3.6e-47 192.2 132 74.2
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 3.6e-47 192.2 147 68.0
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 8.1e-47 191.0 131 73.3
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 1.4e-46 190.3 150 64.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 1.8e-46 189.9 155 65.2
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 1.8e-46 189.9 134 73.1
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 2.4e-46 189.5 189 57.1
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 3.1e-46 189.1 157 65.0
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 3.1e-46 189.1 163 62.0
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 4.0e-46 188.7 132 72.0
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 6.9e-46 188.0 155 64.5
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 6.9e-46 188.0 177 55.9
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 9.0e-46 187.6 133 70.7
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 9.0e-46 187.6 132 72.0
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 1.2e-45 187.2 190 55.3
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 1.2e-45 187.2 190 55.3
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 1.2e-45 187.2 125 74.4
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 1.2e-45 187.2 152 67.1
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.5e-45 186.8 192 55.2
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 3.4e-45 185.7 130 70.8
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 3.4e-45 185.7 190 54.7
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 3.4e-45 185.7 190 54.7
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 4.5e-45 185.3 190 55.8
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 4.5e-45 185.3 149 65.1
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 5.8e-45 184.9 153 63.4
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 9.9e-45 184.1 144 66.7
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 1.3e-44 183.7 191 53.9
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 1.3e-44 183.7 191 53.9
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 1.3e-44 183.7 191 53.9
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 2.2e-44 183.0 154 66.9
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.2e-44 183.0 191 53.9
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 6.4e-44 181.4 191 52.4
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 8.4e-44 181.0 130 68.5
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 8.4e-44 181.0 149 63.1
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 1.4e-43 180.3 212 51.4
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 1.9e-43 179.9 191 52.4
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 1.9e-43 179.9 191 52.4
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 1.9e-43 179.9 191 52.4
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.4e-43 179.5 191 52.4
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 3.5e-42 175.6 164 60.4
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 9.6e-40 167.5 140 62.1
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 4.8e-39 165.2 129 58.9
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 4.8e-39 165.2 130 60.8
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.0e-36 157.5 129 61.2
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 8.4e-36 154.5 153 58.2
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.4e-35 153.7 153 56.9
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 4.6e-34 148.7 198 49.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.9e-29 131.7 109 62.4
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 7.6e-29 131.3 126 57.1
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 1.1e-24 117.5 117 59.0
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 9.7e-24 114.4 115 55.7
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 3.1e-22 109.4 189 39.7
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 8.5e-20 101.3 56 80.4
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.4e-19 100.5 63 77.8
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 3.6e-18 95.9 71 66.2
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.1e-16 90.9 83 57.8
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 2.2e-15 86.7 73 63.0


User provided reference genes

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