Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 0.0e+00 1417.1 710 100.0
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 9.0e-107 392.1 552 46.7
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 4.8e-92 343.2 364 55.5
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 8.2e-84 315.8 258 66.3
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 2.6e-82 310.8 719 37.1
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 4.2e-80 303.5 730 36.4
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 3.0e-78 297.4 766 33.9
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.5e-77 295.0 271 60.9
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 2.4e-75 287.7 278 57.2
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 2.6e-74 284.3 673 35.2
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.9e-72 278.1 443 43.8
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 1.4e-67 261.9 705 32.9
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 9.1e-67 259.2 693 31.9
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 1.2e-66 258.8 270 55.9
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 1.2e-66 258.8 704 32.2
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 2.0e-66 258.1 718 32.3
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 2.2e-65 254.6 213 64.3
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 2.5e-64 251.1 379 44.9
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 1.2e-63 248.8 326 48.5
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 2.7e-63 247.7 288 51.0
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 1.8e-62 245.0 226 60.2
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 3.0e-62 244.2 248 56.9
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 1.5e-61 241.9 219 62.1
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 1.5e-61 241.9 253 54.2
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 5.7e-61 240.0 324 47.5
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 9.7e-61 239.2 714 33.1
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 9.7e-61 239.2 400 43.2
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 9.7e-61 239.2 245 57.6
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 8.2e-60 236.1 359 42.3
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 2.0e-58 231.5 228 55.3
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 7.7e-58 229.6 670 31.3
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 2.2e-57 228.0 406 41.4
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 3.8e-57 227.3 277 47.7
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 1.2e-55 222.2 254 55.1
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 2.7e-55 221.1 270 48.9
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 2.7e-55 221.1 398 40.5
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 2.7e-55 221.1 233 55.4
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 4.7e-55 220.3 211 58.3
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 1.8e-54 218.4 219 58.0
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 3.0e-54 217.6 240 52.9
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 4.0e-54 217.2 220 57.7
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 4.0e-54 217.2 311 44.4
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 6.7e-54 216.5 237 51.9
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 8.8e-54 216.1 175 63.4
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.2e-53 215.7 359 41.2
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 1.5e-53 215.3 298 45.0
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 2.0e-53 214.9 220 55.0
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.4e-51 208.8 242 50.8
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 1.2e-50 205.7 205 56.6
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 5.9e-50 203.4 168 63.7
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 2.2e-49 201.4 230 53.9
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 3.8e-49 200.7 168 63.1
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 3.8e-49 200.7 329 40.1
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 8.0e-47 193.0 292 44.2
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 1.8e-43 181.8 661 29.2
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.5e-40 172.2 219 43.8
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 2.2e-36 158.3 168 54.2
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 1.1e-35 156.0 187 48.7
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 7.0e-35 153.3 176 44.9
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.2e-29 136.0 223 36.8
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.6e-29 134.8 183 42.1
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.1e-27 127.5 182 41.8
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.1e-27 127.5 182 41.8
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 3.5e-26 124.4 153 49.0
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 3.7e-12 77.8 118 44.9
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 6.4e-12 77.0 140 32.1
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 5.4e-11 73.9 148 30.4
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 6.0e-10 70.5 164 32.3
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 6.6e-09 67.0 52 63.5
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 9.5e-08 63.2 46 65.2


User provided reference genes

Program Settings