Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 3.0e-117 425.2 222 100.0
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 7.7e-81 304.3 227 75.3
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 7.2e-79 297.7 224 73.2
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.0e-77 293.9 215 75.8
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.8e-74 283.1 207 70.0
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 2.5e-71 272.7 227 63.0
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 9.4e-71 270.8 220 70.0
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.1e-70 269.6 220 69.5
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 2.7e-70 269.2 214 67.8
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 4.7e-70 268.5 209 66.0
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 8.0e-70 267.7 214 67.3
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.0e-69 267.3 214 66.4
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.0e-68 263.1 218 66.5
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 5.7e-68 261.5 211 67.3
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 7.5e-68 261.2 214 63.6
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 3.7e-67 258.8 225 64.4
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.1e-66 257.3 204 67.6
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.1e-66 255.8 199 66.3
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 3.1e-66 255.8 217 69.1
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 3.1e-66 255.8 218 63.8
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 5.4e-66 255.0 214 65.4
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 9.1e-66 254.2 225 65.3
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.2e-65 253.8 199 68.3
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 1.6e-65 253.4 222 66.2
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 2.0e-65 253.1 214 65.0
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.7e-65 252.7 225 66.2
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 3.5e-65 252.3 225 66.7
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 3.5e-65 252.3 203 68.5
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.0e-64 250.8 212 64.2
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.7e-64 250.0 201 71.1
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.7e-64 250.0 247 60.7
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.2e-64 249.6 248 59.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 2.9e-64 249.2 234 64.1
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 2.9e-64 249.2 201 69.2
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 3.8e-64 248.8 204 68.1
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 5.0e-64 248.4 217 65.0
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 5.0e-64 248.4 203 67.5
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 8.5e-64 247.7 206 68.0
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 1.5e-63 246.9 237 61.2
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.9e-63 246.5 196 64.8
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 1.9e-63 246.5 206 68.0
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 2.5e-63 246.1 215 65.1
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 2.5e-63 246.1 240 62.1
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 7.2e-63 244.6 196 66.3
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 9.5e-63 244.2 217 64.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 2.7e-62 242.7 211 62.6
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 3.6e-62 242.3 180 74.4
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.4e-61 240.4 190 67.4
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 1.8e-61 240.0 185 69.2
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 4.0e-61 238.8 228 60.1
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 5.2e-61 238.4 225 62.7
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 6.8e-61 238.0 200 68.5
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 6.8e-61 238.0 223 61.9
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 8.8e-61 237.7 228 63.6
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 1.2e-60 237.3 213 61.5
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 2.0e-60 236.5 237 61.2
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 2.6e-60 236.1 224 61.2
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 3.4e-60 235.7 220 60.9
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 5.7e-60 235.0 220 63.2
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 5.7e-60 235.0 238 60.5
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 7.5e-60 234.6 237 60.3
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 9.8e-60 234.2 222 59.0
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.7e-59 233.4 237 60.8
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 6.3e-59 231.5 219 58.4
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 6.3e-59 231.5 183 68.9
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 8.3e-59 231.1 210 63.3
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.4e-58 230.3 221 57.9
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.4e-58 230.3 219 58.0
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.4e-58 230.3 226 59.7
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 1.8e-58 229.9 206 62.6
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 1.8e-58 229.9 206 62.6
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.8e-58 229.9 205 60.0
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 1.8e-58 229.9 206 62.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.4e-58 229.6 191 68.1
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 2.4e-58 229.6 224 60.3
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 4.1e-58 228.8 222 57.2
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 4.1e-58 228.8 208 63.0
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 5.4e-58 228.4 224 59.8
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 5.4e-58 228.4 204 61.3
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 7.0e-58 228.0 219 58.0
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 7.0e-58 228.0 219 58.0
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.6e-57 226.9 219 58.0
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 1.6e-57 226.9 192 67.2
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 2.0e-57 226.5 205 58.5
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 2.7e-57 226.1 229 57.2
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 3.5e-57 225.7 224 58.5
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 5.9e-57 224.9 220 60.0
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 5.9e-57 224.9 215 57.2
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 3.8e-56 222.2 208 58.7
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 5.0e-56 221.9 228 57.0
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 2.5e-55 219.5 197 62.4
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 3.3e-55 219.2 188 63.8
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 7.3e-55 218.0 201 62.2
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 1.2e-54 217.2 226 55.3
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 8.0e-54 214.5 166 69.9
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 1.4e-53 213.8 260 52.7
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 3.0e-53 212.6 166 69.3
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 1.8e-50 203.4 228 55.3
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 2.4e-50 203.0 168 64.3
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.6e-49 200.3 231 51.9
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 2.0e-49 199.9 165 65.5
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 2.0e-49 199.9 224 51.8
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 2.7e-49 199.5 166 61.4
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.0e-48 197.6 172 68.0
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.7e-48 196.8 120 81.7
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.7e-48 196.8 127 78.7
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.5e-47 193.7 135 71.9
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 2.8e-46 189.5 153 67.3
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 3.1e-45 186.0 136 69.1
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 5.2e-45 185.3 138 73.9
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 4.4e-44 182.2 226 49.6
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 1.3e-43 180.6 216 54.6
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 2.2e-43 179.9 182 53.8
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.9e-43 178.7 165 58.2
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 1.2e-41 174.1 214 52.3
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 2.1e-38 163.3 141 63.1
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 8.1e-38 161.4 134 66.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 8.1e-38 161.4 145 57.2
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 8.1e-38 161.4 215 46.5
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 1.5e-36 157.1 146 59.6
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.4e-34 149.8 160 58.8
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.2e-28 131.0 160 51.2
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 1.2e-25 120.9 104 56.7
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 2.1e-25 120.2 111 61.3
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 3.4e-20 102.8 135 44.4
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 7.6e-20 101.7 97 60.8
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 2.1e-14 83.6 83 57.8
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 2.1e-14 83.6 110 46.4
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.7e-11 73.9 228 32.5
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.8e-08 63.9 66 53.0
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 1.5e-07 60.8 52 73.1
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 8.1e-06 55.1 113 42.5


User provided reference genes

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