Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 5.2e-207 724.2 368 100.0
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.4e-50 204.5 375 39.7
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 3.4e-25 120.2 402 31.8
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 7.6e-25 119.0 402 30.6
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 4.2e-23 113.2 372 33.6
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 3.5e-22 110.2 393 32.1
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 6.0e-22 109.4 402 31.1
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 3.0e-21 107.1 153 48.4
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 8.7e-21 105.5 209 39.2
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 8.7e-21 105.5 363 32.5
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 1.1e-20 105.1 390 31.5
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 1.1e-20 105.1 311 33.4
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 4.3e-20 103.2 380 30.8
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 5.6e-20 102.8 203 37.9
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 7.4e-20 102.4 385 32.5
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.3e-19 101.7 377 30.8
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 1.6e-19 101.3 320 35.6
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 3.7e-19 100.1 396 30.1
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 1.1e-18 98.6 321 30.2
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.4e-18 98.2 380 30.3
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 3.1e-18 97.1 222 37.4
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 6.9e-18 95.9 303 36.0
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.2e-17 95.1 228 37.3
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.6e-17 94.0 255 35.7
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 3.4e-17 93.6 227 37.0
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 4.5e-17 93.2 218 38.1
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 7.6e-17 92.4 180 40.0
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.2e-16 90.9 227 35.7
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 2.9e-16 90.5 245 36.7
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 8.4e-16 89.0 235 35.3
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 1.1e-15 88.6 308 32.5
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 2.5e-15 87.4 371 29.4
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 3.2e-15 87.0 357 28.3
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 4.2e-15 86.7 380 28.7
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 4.2e-15 86.7 204 40.2
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 5.5e-15 86.3 219 38.4
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 5.5e-15 86.3 232 38.4
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 1.2e-14 85.1 401 27.4
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 2.1e-14 84.3 394 29.9
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 2.7e-14 84.0 381 30.2
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 3.5e-14 83.6 328 32.3
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 3.5e-14 83.6 279 31.2
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 4.6e-14 83.2 378 28.3
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 6.0e-14 82.8 343 28.9
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 1.3e-13 81.6 279 33.3
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 1.3e-13 81.6 389 28.0
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 1.3e-13 81.6 351 29.6
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 2.3e-13 80.9 194 37.6
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 3.0e-13 80.5 203 35.0
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 3.9e-13 80.1 190 36.8
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 6.7e-13 79.3 191 36.6
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 6.7e-13 79.3 349 29.5
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 8.7e-13 79.0 371 28.3
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 1.1e-12 78.6 184 39.1
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.9e-12 77.8 330 30.0
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 2.5e-12 77.4 86 48.8
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 3.3e-12 77.0 300 30.3
PGR142G1787 Punica granatum HOM05D001841 ORTHO05D001767 3.3e-12 77.0 334 30.2
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 7.4e-12 75.9 381 26.5
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 9.6e-12 75.5 189 36.0
Nn5g30193 Nelumbo nucifera HOM05D001841 ORTHO05D001767 9.6e-12 75.5 409 27.6
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 1.6e-11 74.7 403 27.3
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 1.6e-11 74.7 375 29.1
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 3.7e-11 73.6 141 40.4
THA.LOC104803791 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 3.7e-11 73.6 101 47.5
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 6.2e-11 72.8 395 27.6
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 6.2e-11 72.8 241 34.0
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 8.2e-11 72.4 390 26.7
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 1.4e-10 71.6 258 34.9
QL11p037275 Quercus lobata HOM05D001841 ORTHO05D001767 1.8e-10 71.2 300 28.7
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 2.4e-10 70.9 188 34.6
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 3.1e-10 70.5 389 26.2
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 5.3e-10 69.7 366 27.0
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 6.9e-10 69.3 401 28.7
SEGI_11594 Sequoiadendron giganteum HOM05D003270 ORTHO05D003662 9.0e-10 68.9 432 26.2
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 2.0e-09 67.8 208 34.6
Lalb_Chr05g0219031 Lupinus albus HOM05D001841 ORTHO05D001767 2.0e-09 67.8 379 27.7
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 2.6e-09 67.4 212 32.1
Oeu007260.1 Olea europaea HOM05D001841 ORTHO05D001767 4.5e-09 66.6 299 28.1
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 4.5e-09 66.6 383 26.4
FvH4_2g06670 Fragaria vesca HOM05D001841 ORTHO05D001767 5.8e-09 66.2 404 27.2
MBI02_g21198_MAGBIO Magnolia biondii HOM05D001841 ORTHO05D001767 5.8e-09 66.2 277 28.9
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 7.6e-09 65.9 172 33.1
RcHm_v2.0_Chr6g0258711 Rosa chinensis HOM05D001841 ORTHO05D001767 7.6e-09 65.9 334 27.5
FAN24G1402 Fragaria x ananassa HOM05D001841 ORTHO05D001767 1.3e-08 65.1 404 27.2
FAN15G3466 Fragaria x ananassa HOM05D001841 ORTHO05D001767 2.2e-08 64.3 404 27.0
Aqoxy6G01410 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 2.9e-08 63.9 272 26.1
FAN20G1156 Fragaria x ananassa HOM05D001841 ORTHO05D001767 2.9e-08 63.9 400 27.0
AT2G26530 Arabidopsis thaliana HOM05D001841 ORTHO05D001767 3.8e-08 63.5 353 24.6
SEGI_26394 Sequoiadendron giganteum HOM05D001841 ORTHO05D001767 3.8e-08 63.5 196 35.2
ECA240G3738 Erigeron canadensis HOM05D004351 ORTHO05D005196 4.9e-08 63.2 92 45.7
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 6.5e-08 62.8 138 35.5
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 1.1e-07 62.0 138 37.7
AL4G19390 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 1.4e-07 61.6 358 25.1
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.9e-07 61.2 195 34.4
Cpa.g.sc376.7 Carica papaya HOM05D001841 ORTHO05D001767 1.9e-07 61.2 371 26.4
Cfa005454 Carpinus fangiana HOM05D001841 ORTHO05D001767 1.9e-07 61.2 284 28.9
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 3.2e-07 60.5 328 25.9
Sc08g0000020 Simmondsia chinensis HOM05D001841 ORTHO05D001767 3.2e-07 60.5 306 26.1
Prupe.8G119300 Prunus persica HOM05D001841 ORTHO05D001767 4.2e-07 60.1 322 28.9
TWI36G0039 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 4.2e-07 60.1 323 26.9
MSTRG.16762 Avicennia marina HOM05D001841 ORTHO05D001767 5.5e-07 59.7 378 28.0
C03p32340 Brassica napus HOM05D001841 ORTHO05D001767 5.5e-07 59.7 257 27.2
BolC3t15576H Brassica oleracea HOM05D001841 ORTHO05D001767 5.5e-07 59.7 257 27.2
Lsat_1_v5_gn_5_113300 Lactuca sativa HOM05D001841 ORTHO05D001767 5.5e-07 59.7 210 32.4
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 5.5e-07 59.7 284 29.2
Thecc.08G013800 Theobroma cacao HOM05D001841 ORTHO05D001767 5.5e-07 59.7 377 25.2
ATR0097G009 Amborella trichopoda HOM05D001841 ORTHO05D001767 7.1e-07 59.3 358 27.4
Actinidia27944 Actinidia chinensis HOM05D000058 ORTHO05D001767 1.6e-06 58.2 357 26.3
HanXRQChr11g0324211 Helianthus annuus HOM05D001841 ORTHO05D001767 1.6e-06 58.2 113 40.7
Rhsim05G0081500 Rhododendron simsii HOM05D001841 ORTHO05D001767 1.6e-06 58.2 325 25.2
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 2.1e-06 57.8 157 32.5
CARHR120050 Cardamine hirsuta HOM05D001841 ORTHO05D001767 2.7e-06 57.4 145 35.9
Oeu013688.1 Olea europaea HOM05D001841 ORTHO05D001767 2.7e-06 57.4 335 26.3
Sp4g07730 Schrenkiella parvula HOM05D001841 ORTHO05D001767 2.7e-06 57.4 217 30.9
Duzib093G1523 Durio zibethinus HOM05D001841 ORTHO05D001767 3.5e-06 57.0 377 26.3
CANSAT25G1334 Cannabis sativa HOM05D001841 ORTHO05D001767 4.6e-06 56.6 288 28.8
Gorai.009G209200 Gossypium raimondii HOM05D001841 ORTHO05D001767 4.6e-06 56.6 262 29.4
Gohir.D05G203200 Gossypium hirsutum HOM05D001841 ORTHO05D001767 6.1e-06 56.2 270 27.4
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 7.9e-06 55.8 262 27.9
Dinv23581 Davidia involucrata HOM05D001841 ORTHO05D001767 7.9e-06 55.8 314 28.3
QL02p006055 Quercus lobata HOM05D001841 ORTHO05D001767 7.9e-06 55.8 150 35.3


User provided reference genes

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