Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 1.3e-188 662.9 346 100.0
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 1.6e-104 383.6 240 76.2
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 2.9e-103 379.4 238 75.2
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 1.1e-102 377.5 238 76.5
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.2e-102 375.9 240 75.0
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.2e-102 375.9 240 75.0
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 3.2e-102 375.9 238 77.3
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 9.4e-102 374.4 235 76.6
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 2.7e-101 372.9 245 74.7
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 3.6e-101 372.5 238 76.5
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 3.6e-101 372.5 240 74.6
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 4.7e-101 372.1 286 65.7
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 6.1e-101 371.7 237 76.4
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 8.0e-101 371.3 253 72.7
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 1.4e-100 370.5 238 75.6
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 1.4e-100 370.5 238 75.6
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 3.0e-100 369.4 238 74.4
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 1.2e-99 367.5 239 74.9
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.5e-99 367.1 238 75.2
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 2.0e-99 366.7 238 75.6
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 2.6e-99 366.3 238 75.2
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 5.7e-99 365.2 238 73.9
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 7.5e-99 364.8 238 74.4
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 9.8e-99 364.4 238 75.2
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 9.8e-99 364.4 236 75.4
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.3e-98 364.0 240 73.3
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 2.2e-98 363.2 238 73.5
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 2.8e-98 362.8 238 72.3
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 3.7e-98 362.5 238 72.7
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 6.3e-98 361.7 238 73.1
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 6.3e-98 361.7 241 71.8
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 8.3e-98 361.3 240 72.5
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 8.3e-98 361.3 240 72.9
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 1.1e-97 360.9 238 72.7
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 1.1e-97 360.9 238 72.3
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 1.1e-97 360.9 238 73.9
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 1.1e-97 360.9 238 74.4
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 3.1e-97 359.4 240 72.5
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 7.0e-97 358.2 239 71.5
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 9.1e-97 357.8 238 70.6
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.2e-96 357.5 238 71.8
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 2.7e-96 356.3 240 72.1
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 5.9e-96 355.1 238 73.1
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 7.7e-96 354.8 237 71.7
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 1.0e-95 354.4 240 71.7
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.3e-95 354.0 239 72.0
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 1.7e-95 353.6 241 71.8
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 1.7e-95 353.6 240 72.1
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 2.3e-95 353.2 240 72.9
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 2.9e-95 352.8 238 71.8
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 1.1e-94 350.9 279 66.7
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 1.1e-94 350.9 279 66.7
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 1.1e-94 350.9 240 69.6
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 1.9e-94 350.1 237 70.9
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 3.3e-94 349.4 236 71.2
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 4.2e-94 349.0 238 71.0
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 5.5e-94 348.6 238 71.0
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 9.5e-94 347.8 248 69.0
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 9.5e-94 347.8 238 71.0
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 9.5e-94 347.8 238 71.0
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 1.6e-93 347.1 240 72.1
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 2.1e-93 346.7 241 69.7
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 2.8e-93 346.3 238 70.6
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 3.6e-93 345.9 279 66.3
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 4.7e-93 345.5 236 68.2
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 4.7e-93 345.5 238 71.0
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 6.1e-93 345.1 238 68.9
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 1.4e-92 344.0 255 65.5
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 1.8e-92 343.6 242 68.6
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 3.0e-92 342.8 240 67.9
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 4.0e-92 342.4 238 68.9
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 5.2e-92 342.0 233 72.1
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.2e-91 340.9 264 64.8
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 2.6e-91 339.7 238 68.1
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 2.6e-91 339.7 241 68.9
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 2.6e-91 339.7 241 66.4
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 4.4e-91 339.0 241 68.9
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 9.8e-91 337.8 234 67.9
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 3.7e-90 335.9 241 68.0
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 4.9e-90 335.5 238 67.6
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 1.4e-89 334.0 240 67.5
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 1.4e-89 334.0 240 67.5
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 5.4e-89 332.0 225 72.0
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 1.2e-88 330.9 238 67.6
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 1.6e-88 330.5 240 66.7
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.0e-87 327.8 278 64.0
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 2.9e-87 326.2 251 64.5
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 1.1e-86 324.3 232 70.3
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.1e-86 324.3 238 66.0
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 7.3e-86 321.6 244 66.4
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 7.3e-86 321.6 221 70.1
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 9.5e-86 321.2 243 65.4
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 1.2e-85 320.9 238 65.5
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 2.1e-85 320.1 230 72.2
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 1.4e-84 317.4 240 65.8
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 1.8e-84 317.0 233 67.8
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 2.6e-83 313.2 238 68.5
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 9.8e-83 311.2 236 66.1
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 9.8e-83 311.2 196 77.0
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 2.9e-82 309.7 279 59.1
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 4.9e-82 308.9 227 67.0
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.9e-81 307.0 227 66.1
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 2.4e-81 306.6 251 60.2
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 4.1e-81 305.8 238 66.0
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 5.4e-81 305.4 240 63.3
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 7.0e-81 305.1 215 68.8
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 1.2e-80 304.3 209 72.2
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 3.5e-80 302.8 237 62.0
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 4.6e-80 302.4 239 61.5
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 1.5e-78 297.4 227 65.2
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 2.5e-78 296.6 216 67.1
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 2.8e-77 293.1 254 59.4
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 8.9e-76 288.1 239 60.7
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 7.5e-75 285.0 206 67.5
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 3.7e-74 282.7 231 61.0
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 6.4e-74 282.0 207 66.7
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 3.2e-73 279.6 257 56.8
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 7.0e-73 278.5 147 96.6
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 8.6e-71 271.6 222 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 1.9e-70 270.4 241 56.8
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 3.1e-68 263.1 232 55.6
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 3.1e-68 263.1 236 57.2
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 4.6e-64 249.2 164 72.6
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 6.0e-64 248.8 206 61.7
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 6.0e-64 248.8 221 58.4
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 1.7e-63 247.3 274 50.4
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 8.6e-63 245.0 197 62.4
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 5.6e-62 242.3 214 57.9
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 8.1e-61 238.4 254 53.1
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 1.5e-59 234.2 238 51.3
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.3e-58 231.1 238 52.5
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 2.9e-58 229.9 158 72.2
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 4.9e-58 229.2 220 58.6
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 1.2e-56 224.6 178 65.2
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.5e-54 217.6 239 51.0
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 2.8e-53 213.4 176 60.2
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 6.2e-53 212.2 229 49.8
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 2.4e-52 210.3 204 51.0
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 6.9e-52 208.8 152 66.4
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 1.5e-51 207.6 150 65.3
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 6.4e-50 202.2 205 52.7
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 1.0e-47 194.9 229 48.5
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 1.9e-46 190.7 163 60.1
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 6.2e-45 185.7 253 42.3
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 4.0e-44 183.0 275 40.4
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 3.9e-31 139.8 104 70.2
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 1.3e-29 134.8 90 72.2
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 4.0e-28 129.8 219 36.5
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 2.0e-27 127.5 79 73.4
MBI19_g45264_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 1.1e-20 105.1 142 47.9
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 1.2e-19 101.7 130 46.9
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 7.7e-19 99.0 146 43.8
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 6.7e-15 85.9 60 66.7
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 1.3e-13 81.6 202 30.7
PGSC0003DMG400012448 Solanum tuberosum HOM05D004518 ORTHO05D005434 3.3e-06 57.0 45 57.8


User provided reference genes

Program Settings