Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00377 Aquilegia oxysepala HOM05D004084 ORTHO05D004662 3.2e-78 295.0 152 100.0
Sabra09G0053400 Salix brachista HOM05D004084 ORTHO05D004662 5.9e-32 141.4 173 52.6
Thecc.09G249200 Theobroma cacao HOM05D004084 ORTHO05D004662 3.0e-28 129.0 243 40.7
Potri.009G070600 Populus trichocarpa HOM05D004084 ORTHO05D004662 9.8e-27 124.0 216 42.6
MBI19_g16738_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 1.7e-26 123.2 233 39.1
Manes.02G139800 Manihot esculenta HOM05D004084 ORTHO05D004662 1.7e-26 123.2 248 39.5
Prupe.4G267100 Prunus persica HOM05D004084 ORTHO05D004662 1.7e-26 123.2 243 38.3
TAR623G1229 Trochodendron aralioides HOM05D004084 ORTHO05D004662 1.7e-26 123.2 249 40.2
CiPaw.14G113600 Carya illinoinensis HOM05D004084 ORTHO05D004662 4.8e-26 121.7 250 38.4
Nitab4.5_0012538g0010 Nicotiana tabacum HOM05D004084 ORTHO05D004662 4.8e-26 121.7 249 40.2
Ciclev10016417m.g Citrus clementina HOM05D004084 ORTHO05D004662 8.3e-26 120.9 234 40.6
Duzib168G1105 Durio zibethinus HOM05D004084 ORTHO05D004662 8.3e-26 120.9 248 37.5
Nitab4.5_0000718g0220 Nicotiana tabacum HOM05D004084 ORTHO05D004662 1.8e-25 119.8 250 40.0
MD11G1185700 Malus domestica HOM05D004084 ORTHO05D004662 2.4e-25 119.4 201 41.8
Duzib150G1594 Durio zibethinus HOM05D004084 ORTHO05D004662 4.1e-25 118.6 248 38.3
Hma1.2p1_0129F.1_g060160 Hydrangea macrophylla HOM05D004084 ORTHO05D004662 4.1e-25 118.6 253 39.1
Cfa009849 Carpinus fangiana HOM05D004084 ORTHO05D004662 7.0e-25 117.9 247 40.1
Potri.001G275900 Populus trichocarpa HOM05D004084 ORTHO05D004662 7.0e-25 117.9 234 39.7
VMungo0540G1882 Vigna mungo HOM05D004084 ORTHO05D004662 7.0e-25 117.9 245 38.8
FvH4_3g27900 Fragaria vesca HOM05D004084 ORTHO05D004662 1.6e-24 116.7 211 40.3
FAN21G2250 Fragaria x ananassa HOM05D004084 ORTHO05D004662 2.7e-24 115.9 224 39.7
CANSAT54G0855 Cannabis sativa HOM05D004084 ORTHO05D004662 3.5e-24 115.5 238 37.4
Dinv05100 Davidia involucrata HOM05D004084 ORTHO05D004662 3.5e-24 115.5 225 40.4
Atru.chr3.2757 Acer truncatum HOM05D004084 ORTHO05D004662 4.5e-24 115.2 245 37.6
MBI13_g27798_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 4.5e-24 115.2 230 36.5
RcHm_v2.0_Chr5g0050631 Rosa chinensis HOM05D004084 ORTHO05D004662 4.5e-24 115.2 200 41.0
MSTRG.21348 Avicennia marina HOM05D004084 ORTHO05D004662 5.9e-24 114.8 255 35.3
FAN16G3201 Fragaria x ananassa HOM05D004084 ORTHO05D004662 5.9e-24 114.8 211 40.3
Glyma.20G037400 Glycine max HOM05D004084 ORTHO05D004662 5.9e-24 114.8 242 38.8
Atru.chr4.1902 Acer truncatum HOM05D004084 ORTHO05D004662 7.7e-24 114.4 206 40.8
Glyma.07G230600 Glycine max HOM05D004084 ORTHO05D004662 7.7e-24 114.4 244 36.5
Eucgr.B03731 Eucalyptus grandis HOM05D004084 ORTHO05D004662 2.2e-23 112.8 224 39.3
FAN25G0474 Fragaria x ananassa HOM05D004084 ORTHO05D004662 5.0e-23 111.7 211 39.3
Oeu016695.1 Olea europaea HOM05D004084 ORTHO05D004662 8.5e-23 110.9 200 39.0
Peaxi162Scf00004g04520 Petunia axillaris HOM05D004084 ORTHO05D004662 8.5e-23 110.9 248 36.7
ClCG02G022880 Citrullus lanatus HOM05D004084 ORTHO05D004662 1.9e-22 109.8 244 34.0
Ah.04g161980 Amaranthus hybridus HOM05D004084 ORTHO05D004662 2.5e-22 109.4 262 34.7
SGA_v2.0_scaffold29G12252 Striga asiatica HOM05D004084 ORTHO05D004662 3.2e-22 109.0 250 36.0
Cc08_g06320 Coffea canephora HOM05D004084 ORTHO05D004662 4.2e-22 108.6 207 40.1
Gohir.A13G219100 Gossypium hirsutum HOM05D004084 ORTHO05D004662 4.2e-22 108.6 244 36.9
Gohir.D13G222800 Gossypium hirsutum HOM05D004084 ORTHO05D004662 4.2e-22 108.6 244 37.3
Dinv36171 Davidia involucrata HOM05D004084 ORTHO05D004662 5.5e-22 108.2 246 37.0
Sopen01g004320 Solanum pennellii HOM05D004084 ORTHO05D004662 5.5e-22 108.2 239 38.9
COL.COLO4_35673 Corchorus olitorius HOM05D004084 ORTHO05D004662 7.2e-22 107.8 80 76.2
Gorai.013G253900 Gossypium raimondii HOM05D004084 ORTHO05D004662 1.2e-21 107.1 244 36.9
PGSC0003DMG400022698 Solanum tuberosum HOM05D004084 ORTHO05D004662 1.2e-21 107.1 245 38.0
EL10Ac4g10147 Beta vulgaris HOM05D004084 ORTHO05D004662 1.6e-21 106.7 263 33.8
Sed0020433 Sechium edule HOM05D004084 ORTHO05D004662 2.8e-21 105.9 221 37.1
Solyc01g008810.3 Solanum lycopersicum HOM05D004084 ORTHO05D004662 3.6e-21 105.5 239 38.5
MD03G1166600 Malus domestica HOM05D004084 ORTHO05D004662 4.7e-21 105.1 80 73.8
Hund07438 Selenicereus undatus HOM05D004084 ORTHO05D004662 4.7e-21 105.1 265 33.2
Ca_03985_v3 Cicer arietinum L. HOM05D004084 ORTHO05D004662 6.1e-21 104.8 206 39.8
PGSC0003DMG400009461 Solanum tuberosum HOM05D004084 ORTHO05D004662 6.1e-21 104.8 246 35.8
Haze_23226 Corylus avellana HOM05D004084 ORTHO05D004662 8.0e-21 104.4 82 76.8
Os01g0954400 Oryza sativa ssp. japonica HOM05D004084 ORTHO05D004662 1.4e-20 103.6 210 38.1
MELO3C014562.2 Cucumis melo HOM05D004084 ORTHO05D004662 2.3e-20 102.8 201 37.8
Nitab4.5_0000730g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 2.3e-20 102.8 244 35.7
Rhsim13G0210600 Rhododendron simsii HOM05D004084 ORTHO05D004662 2.3e-20 102.8 242 36.4
TPR.G27271 Trifolium pratense HOM05D004084 ORTHO05D004662 2.3e-20 102.8 82 74.4
Zm00001eb140640 Zea mays HOM05D004084 ORTHO05D004662 2.3e-20 102.8 246 35.8
Phvul.006G030700 Phaseolus vulgaris HOM05D004084 ORTHO05D004662 3.0e-20 102.4 231 36.4
Psat5g181240 Pisum sativum HOM05D004084 ORTHO05D004662 3.0e-20 102.4 209 38.3
CsaV3_6G039010 Cucumis sativus L. HOM05D004084 ORTHO05D004662 4.0e-20 102.1 201 37.8
QL01p017232 Quercus lobata HOM05D004084 ORTHO05D004662 4.0e-20 102.1 80 71.2
Solyc11g064830.2 Solanum lycopersicum HOM05D004084 ORTHO05D004662 4.0e-20 102.1 246 35.4
Sopen11g024490 Solanum pennellii HOM05D004084 ORTHO05D004662 4.0e-20 102.1 246 35.4
Sp6g31330 Schrenkiella parvula HOM05D004084 ORTHO05D004662 5.2e-20 101.7 247 35.6
TWI79G0099 Tripterygium wilfordii HOM05D004084 ORTHO05D004662 5.2e-20 101.7 204 39.2
MSTRG.17633 Avicennia marina HOM05D004084 ORTHO05D004662 1.5e-19 100.1 229 37.1
Oeu025904.1 Olea europaea HOM05D004084 ORTHO05D004662 1.5e-19 100.1 91 68.1
GSVIVG01037269001 Vitis vinifera HOM05D004084 ORTHO05D004662 1.5e-19 100.1 205 37.6
CSS0029213 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 2.0e-19 99.8 95 67.4
CSS0040984 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 2.0e-19 99.8 87 69.0
DCAR_023764 Daucus carota HOM05D000857 ORTHO05D004662 2.0e-19 99.8 85 71.8
Thhalv10014482m.g Eutrema salsugineum HOM05D004084 ORTHO05D004662 2.6e-19 99.4 241 35.7
SEGI_38021 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 2.6e-19 99.4 96 66.7
arahy.Tifrunner.gnm1.ann1.X3DJVQ Arachis hypogaea HOM05D004084 ORTHO05D004662 3.4e-19 99.0 212 37.7
HanXRQChr14g0432231 Helianthus annuus HOM05D004084 ORTHO05D004662 3.4e-19 99.0 258 35.3
Lj1A284G15 Lonicera japonica HOM05D004084 ORTHO05D004662 3.4e-19 99.0 214 37.9
Peaxi162Scf00032g02420 Petunia axillaris HOM05D004084 ORTHO05D004662 4.4e-19 98.6 81 72.8
Actinidia06961 Actinidia chinensis HOM05D004084 ORTHO05D004662 7.5e-19 97.8 97 63.9
arahy.Tifrunner.gnm1.ann1.6L2V6B Arachis hypogaea HOM05D004084 ORTHO05D004662 9.8e-19 97.4 247 33.6
Sabra16G0170200 Salix brachista HOM05D004084 ORTHO05D004662 9.8e-19 97.4 78 71.8
MSTRG.17516 Avicennia marina HOM05D004084 ORTHO05D004662 1.3e-18 97.1 190 39.5
CARHR200800 Cardamine hirsuta HOM05D004084 ORTHO05D004662 1.3e-18 97.1 244 35.2
PSO339G4433 Papaver somniferum HOM05D004084 ORTHO05D004662 2.2e-18 96.3 231 32.5
AUR62000187 Chenopodium quinoa HOM05D004084 ORTHO05D004662 2.8e-18 95.9 111 55.9
Migut.N02373 Erythranthe guttata HOM05D004084 ORTHO05D004662 2.8e-18 95.9 209 37.8
Gohir.D09G106500 Gossypium hirsutum HOM05D004084 ORTHO05D004662 4.9e-18 95.1 238 35.3
PGR102G0788 Punica granatum HOM05D004084 ORTHO05D004662 6.3e-18 94.7 242 34.7
Carub.0006s1082 Capsella rubella HOM05D004084 ORTHO05D004662 1.4e-17 93.6 237 36.7
TWI75G0849 Tripterygium wilfordii HOM05D004084 ORTHO05D004662 1.4e-17 93.6 265 33.6
Aa31LG3G14920 Aethionema arabicum HOM05D004084 ORTHO05D004662 2.4e-17 92.8 247 33.2
Gorai.006G124000 Gossypium raimondii HOM05D004084 ORTHO05D004662 2.4e-17 92.8 238 34.5
ATR0680G173 Amborella trichopoda HOM05D004084 ORTHO05D004662 3.1e-17 92.4 231 34.6
AT5G12310 Arabidopsis thaliana HOM05D004084 ORTHO05D004662 3.1e-17 92.4 246 35.8
arahy.Tifrunner.gnm1.ann1.QA9X4A Arachis hypogaea HOM05D004084 ORTHO05D004662 3.1e-17 92.4 83 68.7
Nitab4.5_0001500g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 3.1e-17 92.4 198 36.4
HanXRQChr06g0182501 Helianthus annuus HOM05D004084 ORTHO05D004662 4.1e-17 92.0 217 35.5
Gohir.A09G110200 Gossypium hirsutum HOM05D004084 ORTHO05D004662 5.4e-17 91.7 238 33.2
Phvul.006G030800 Phaseolus vulgaris HOM05D004084 ORTHO05D004662 9.2e-17 90.9 86 64.0
AUR62006538 Chenopodium quinoa HOM05D001938 ORTHO05D001965 1.6e-16 90.1 120 50.8
Oeu061709.1 Olea europaea HOM05D004084 ORTHO05D004662 2.0e-16 89.7 87 63.2
Sp6g24980 Schrenkiella parvula HOM05D004084 ORTHO05D004662 2.0e-16 89.7 255 31.4
Sc06g0004680 Simmondsia chinensis HOM05D004084 ORTHO05D004662 4.5e-16 88.6 244 32.8
Migut.D00657 Erythranthe guttata HOM05D004084 ORTHO05D004662 5.9e-16 88.2 196 36.7
PSO384G1598 Papaver somniferum HOM05D004084 ORTHO05D004662 5.9e-16 88.2 71 70.4
THA.LOC104824623 Tarenaya hassleriana HOM05D004084 ORTHO05D004662 5.9e-16 88.2 260 31.9
Hund21983 Selenicereus undatus HOM05D004084 ORTHO05D004662 1.3e-15 87.0 94 56.4
ECA238G4029 Erigeron canadensis HOM05D004084 ORTHO05D004662 2.3e-15 86.3 217 33.6
BcaB01g05406 Brassica carinata HOM05D004084 ORTHO05D004662 3.8e-15 85.5 220 33.6
Lsat_1_v5_gn_2_32240 Lactuca sativa HOM05D004084 ORTHO05D004662 5.0e-15 85.1 268 31.0
SGA_v2.0_scaffold310G48197 Striga asiatica HOM05D004084 ORTHO05D004662 1.1e-14 84.0 203 36.0
CDE11G0877 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 3.3e-14 82.4 77 59.7
Lalb_Chr10g0106291 Lupinus albus HOM05D004084 ORTHO05D004662 3.3e-14 82.4 269 30.9
AL6G23110 Arabidopsis lyrata HOM05D004084 ORTHO05D004662 7.3e-14 81.3 90 61.1
BolC9t59292H Brassica oleracea HOM05D004084 ORTHO05D004662 1.6e-13 80.1 256 30.9
AT5G19430 Arabidopsis thaliana HOM05D004084 ORTHO05D004662 2.1e-13 79.7 229 31.9
Lj6g0014777 Lotus japonicus HOM05D004084 ORTHO05D004662 2.8e-13 79.3 253 30.8
A03p05580 Brassica napus HOM05D004084 ORTHO05D004662 6.1e-13 78.2 255 29.8
BraA10t44615Z Brassica rapa HOM05D004084 ORTHO05D004662 6.1e-13 78.2 253 30.4
Carub.0006s1777 Capsella rubella HOM05D004084 ORTHO05D004662 8.0e-13 77.8 246 30.5
BcaB01g05145 Brassica carinata HOM05D004084 ORTHO05D004662 1.4e-12 77.0 248 30.6
A03p09480 Brassica napus HOM05D004084 ORTHO05D004662 1.4e-12 77.0 257 29.6
C03p11060 Brassica napus HOM05D004084 ORTHO05D004662 1.4e-12 77.0 248 30.6
C09p64590 Brassica napus HOM05D004084 ORTHO05D004662 1.4e-12 77.0 255 30.2
BolC3t13575H Brassica oleracea HOM05D004084 ORTHO05D004662 1.4e-12 77.0 248 30.6
PGR119G1682 Punica granatum HOM05D004084 ORTHO05D004662 1.4e-12 77.0 228 30.7
PGR123G0005 Punica granatum HOM05D004084 ORTHO05D004662 1.4e-12 77.0 228 30.7
BraA03t10266Z Brassica rapa HOM05D004084 ORTHO05D004662 1.8e-12 76.6 258 29.5
CARHR193510 Cardamine hirsuta HOM05D004084 ORTHO05D004662 3.0e-12 75.9 94 53.2
AL6G30920 Arabidopsis lyrata HOM05D004084 ORTHO05D004662 1.2e-11 73.9 94 52.1
C03p06530 Brassica napus HOM05D004084 ORTHO05D004662 2.0e-11 73.2 58 60.3
BolC3t13153H Brassica oleracea HOM05D004084 ORTHO05D004662 2.0e-11 73.2 58 60.3
A10p25510 Brassica napus HOM05D004084 ORTHO05D004662 7.5e-11 71.2 255 29.4
Pp3c26_14330 Physcomitrium patens HOM05D004084 ORTHO05D004662 7.5e-11 71.2 187 35.3
SGA_v2.0_scaffold8G04547 Striga asiatica HOM05D001938 ORTHO05D001965 9.8e-11 70.9 221 31.7
BraA03t09895Z Brassica rapa HOM05D004084 ORTHO05D004662 1.3e-10 70.5 58 58.6
BcaNung06777 Brassica carinata HOM05D004084 ORTHO05D004662 5.4e-09 65.1 184 28.8
SHI55208 Sapria himalayana HOM05D004084 ORTHO05D004662 9.2e-09 64.3 69 55.1
Nn7g36697 Nelumbo nucifera HOM05D004084 ORTHO05D004662 1.2e-08 63.9 64 54.7
Thhalv10014461m.g Eutrema salsugineum HOM05D004084 ORTHO05D004662 1.6e-08 63.5 183 26.2
SalBow6G0813 Salvia bowleyana HOM05D004084 ORTHO05D004662 1.6e-08 63.5 61 63.9
unitig_8.g3650 Utricularia gibba HOM05D004084 ORTHO05D000654 2.0e-08 63.2 230 28.7
BcaB01g04862 Brassica carinata HOM05D004084 ORTHO05D004662 4.6e-08 62.0 63 52.4
Actinidia16378 Actinidia chinensis HOM05D004084 ORTHO05D004662 2.3e-07 59.7 76 43.4
CBR_g131 Chara braunii HOM05D004084 ORTHO05D004662 8.6e-07 57.8 88 48.9
COL.COLO4_35674 Corchorus olitorius HOM05D004084 ORTHO05D004662 1.9e-06 56.6 71 50.7
Nn7g36696 Nelumbo nucifera HOM05D004084 ORTHO05D004662 1.9e-06 56.6 34 73.5
SMO337G0017 Selaginella moellendorffii HOM05D004084 ORTHO05D004662 1.9e-06 56.6 66 54.5
CSS0027788 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 2.5e-06 56.2 71 43.7
QL01p017234 Quercus lobata HOM05D004084 ORTHO05D004662 2.5e-06 56.2 72 41.7
arahy.Tifrunner.gnm1.ann1.F7NEFJ Arachis hypogaea HOM05D004084 ORTHO05D004662 5.6e-06 55.1 48 72.9
arahy.Tifrunner.gnm1.ann1.K0L3ZW Arachis hypogaea HOM05D004084 ORTHO05D004662 5.6e-06 55.1 48 72.9
CSS0038115 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 5.6e-06 55.1 61 52.5
CARHR193520 Cardamine hirsuta HOM05D004084 ORTHO05D004662 5.6e-06 55.1 61 49.2
Haze_23225 Corylus avellana HOM05D004084 ORTHO05D004662 7.3e-06 54.7 72 48.6
SEGI_32483 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 7.3e-06 54.7 65 56.9


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