Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00199 Aquilegia oxysepala HOM05D003595 ORTHO05D004132 1.4e-69 266.2 131 100.0
Manes.14G003000 Manihot esculenta HOM05D003595 ORTHO05D004132 2.5e-10 69.3 93 41.9
QL01p004672 Quercus lobata HOM05D003595 ORTHO05D004132 5.5e-10 68.2 95 49.5
TAR636G3263 Trochodendron aralioides HOM05D003595 ORTHO05D004132 9.3e-10 67.4 93 45.2
Nn2g15359 Nelumbo nucifera HOM05D003595 ORTHO05D004132 2.7e-09 65.9 94 48.9
TAR633G0913 Trochodendron aralioides HOM05D003595 ORTHO05D004132 6.1e-09 64.7 88 46.6
Nn7g36211 Nelumbo nucifera HOM05D003595 ORTHO05D004132 1.0e-08 63.9 94 46.8
Potri.001G257700 Populus trichocarpa HOM05D003595 ORTHO05D004132 1.0e-08 63.9 91 42.9
Thecc.09G234200 Theobroma cacao HOM05D003595 ORTHO05D004132 1.0e-08 63.9 94 41.5
CiPaw.14G118800 Carya illinoinensis HOM05D003595 ORTHO05D004132 1.8e-08 63.2 92 51.1
Sabra16G0157600 Salix brachista HOM05D003595 ORTHO05D004132 1.8e-08 63.2 91 38.5
Haze_23141 Corylus avellana HOM05D003595 ORTHO05D004132 3.0e-08 62.4 94 43.6
TAR623G0789 Trochodendron aralioides HOM05D003595 ORTHO05D004132 3.0e-08 62.4 66 48.5
TAR623G1528 Trochodendron aralioides HOM05D003595 ORTHO05D004132 6.7e-08 61.2 66 48.5
Gohir.D09G110700 Gossypium hirsutum HOM05D003595 ORTHO05D004132 1.1e-07 60.5 94 40.4
Cfa009775 Carpinus fangiana HOM05D003595 ORTHO05D004132 1.5e-07 60.1 93 41.9
Gohir.A09G114100 Gossypium hirsutum HOM05D003595 ORTHO05D004132 1.5e-07 60.1 94 40.4
Manes.06G164000 Manihot esculenta HOM05D003595 ORTHO05D004132 1.5e-07 60.1 95 41.1
Gorai.006G128400 Gossypium raimondii HOM05D003595 ORTHO05D004132 1.9e-07 59.7 94 40.4
Potri.009G053000 Populus trichocarpa HOM05D003595 ORTHO05D004132 2.5e-07 59.3 91 40.7
CSS0007298 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 4.3e-07 58.5 93 41.9
Glyma.19G141300 Glycine max HOM05D003595 ORTHO05D004132 4.3e-07 58.5 92 39.1
Lsat_1_v5_gn_6_48040 Lactuca sativa HOM05D003595 ORTHO05D004132 5.7e-07 58.2 96 44.8
CSS0047718 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 7.4e-07 57.8 42 61.9
CiPaw.13G160700 Carya illinoinensis HOM05D003595 ORTHO05D004132 7.4e-07 57.8 95 43.2
CsaV3_4G024290 Cucumis sativus L. HOM05D003595 ORTHO05D004132 7.4e-07 57.8 42 64.3
Medtr1g052770 Medicago truncatula HOM05D003595 ORTHO05D004132 9.7e-07 57.4 65 52.3
Prupe.4G249800 Prunus persica HOM05D003595 ORTHO05D004132 9.7e-07 57.4 90 43.3
Actinidia06343 Actinidia chinensis HOM05D003595 ORTHO05D004132 1.3e-06 57.0 95 40.0
CSS0046994 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 1.6e-06 56.6 93 39.8
Cpa.g.sc84.51 Carica papaya HOM05D003595 ORTHO05D004132 1.6e-06 56.6 38 65.8
Dinv22175 Davidia involucrata HOM05D000545 ORTHO05D000539 1.6e-06 56.6 94 42.6
Eucgr.B03689 Eucalyptus grandis HOM05D003595 ORTHO05D004132 1.6e-06 56.6 94 40.4
MD03G1174700 Malus domestica HOM05D003595 ORTHO05D004132 2.8e-06 55.8 91 42.9
TPR.G30109 Trifolium pratense HOM05D003595 ORTHO05D004132 2.8e-06 55.8 77 49.4
Migut.N02319 Erythranthe guttata HOM05D003595 ORTHO05D004132 3.7e-06 55.5 84 44.0
RcHm_v2.0_Chr5g0052211 Rosa chinensis HOM05D003595 ORTHO05D004132 3.7e-06 55.5 94 43.6
Glyma.02G182300 Glycine max HOM05D003595 ORTHO05D004132 4.8e-06 55.1 88 42.0
MD11G1192700 Malus domestica HOM05D003595 ORTHO05D004132 4.8e-06 55.1 94 42.6
Cc00_g16730 Coffea canephora HOM05D003595 ORTHO05D004132 8.2e-06 54.3 93 36.6
Oeu025870.1 Olea europaea HOM05D003595 ORTHO05D004132 8.2e-06 54.3 96 39.6


User provided reference genes

Program Settings