Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 2.6e-94 349.0 213 100.0
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 4.8e-88 328.2 213 91.1
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 7.7e-46 188.0 216 53.7
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.4e-26 124.0 248 39.5
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 4.0e-26 122.5 243 37.0
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 1.5e-25 120.6 258 37.6
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 2.0e-25 120.2 252 36.5
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 2.6e-25 119.8 257 37.4
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 5.7e-25 118.6 246 40.2
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 7.5e-25 118.2 262 38.2
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 3.7e-24 115.9 259 38.2
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 4.9e-24 115.5 149 49.0
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 4.9e-24 115.5 149 49.0
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 4.9e-24 115.5 267 38.2
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 6.4e-24 115.2 250 38.8
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 8.3e-24 114.8 143 50.3
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 2.4e-23 113.2 152 48.7
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 4.1e-23 112.5 267 36.7
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 4.1e-23 112.5 262 36.6
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 4.1e-23 112.5 270 37.0
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 5.4e-23 112.1 256 35.5
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 1.6e-22 110.5 254 36.6
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 1.6e-22 110.5 256 35.5
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 1.6e-22 110.5 261 35.2
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 2.0e-22 110.2 156 43.6
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 2.0e-22 110.2 259 36.7
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 3.5e-22 109.4 262 34.7
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 4.6e-22 109.0 153 44.4
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.9e-22 108.6 148 45.3
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 5.9e-22 108.6 252 36.9
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 7.8e-22 108.2 246 37.8
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 7.8e-22 108.2 159 44.0
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.0e-21 107.8 215 37.2
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 1.0e-21 107.8 250 36.0
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.7e-21 107.1 261 36.8
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 1.7e-21 107.1 256 34.4
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 2.3e-21 106.7 263 34.6
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 3.0e-21 106.3 259 35.5
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 3.0e-21 106.3 256 34.0
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 3.0e-21 106.3 256 34.0
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.9e-21 105.9 148 44.6
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.9e-21 105.9 148 44.6
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 6.6e-21 105.1 150 46.0
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 6.6e-21 105.1 150 46.0
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 6.6e-21 105.1 150 46.0
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 6.6e-21 105.1 261 36.0
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 6.6e-21 105.1 253 36.0
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 6.6e-21 105.1 152 46.1
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.6e-21 105.1 152 46.1
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 6.6e-21 105.1 240 33.3
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 6.6e-21 105.1 157 43.9
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 6.6e-21 105.1 232 36.2
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 8.6e-21 104.8 154 47.4
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 8.6e-21 104.8 149 45.0
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 8.6e-21 104.8 241 36.1
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 8.6e-21 104.8 241 36.1
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 8.6e-21 104.8 151 46.4
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 8.6e-21 104.8 236 37.7
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.1e-20 104.4 237 37.1
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 1.1e-20 104.4 235 37.0
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.5e-20 104.0 157 42.7
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 1.9e-20 103.6 150 44.7
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 1.9e-20 103.6 263 31.9
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 2.5e-20 103.2 265 34.7
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 2.5e-20 103.2 265 34.7
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 2.5e-20 103.2 279 34.1
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.5e-20 103.2 240 36.2
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.5e-20 103.2 240 36.2
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 2.5e-20 103.2 278 35.3
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.3e-20 102.8 266 34.2
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.3e-20 102.8 159 45.3
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 4.3e-20 102.4 151 45.7
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 4.3e-20 102.4 147 46.3
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 5.6e-20 102.1 250 34.8
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 5.6e-20 102.1 250 33.2
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 7.3e-20 101.7 144 44.4
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 7.3e-20 101.7 149 45.6
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 7.3e-20 101.7 151 45.0
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 7.3e-20 101.7 254 35.8
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 9.5e-20 101.3 236 38.1
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 9.5e-20 101.3 150 44.0
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 9.5e-20 101.3 236 38.1
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 9.5e-20 101.3 157 43.3
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 9.5e-20 101.3 245 33.1
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 9.5e-20 101.3 255 35.7
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 1.2e-19 100.9 250 33.6
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 1.2e-19 100.9 243 34.2
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 1.2e-19 100.9 262 33.6
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 1.2e-19 100.9 234 37.6
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 1.6e-19 100.5 246 36.2
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 2.1e-19 100.1 201 39.8
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 2.8e-19 99.8 159 43.4
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.8e-19 99.8 148 43.2
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 2.8e-19 99.8 210 39.5
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 3.6e-19 99.4 252 33.7
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 3.6e-19 99.4 159 42.8
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 3.6e-19 99.4 261 33.3
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 3.6e-19 99.4 262 34.4
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.2e-19 98.6 145 43.4
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 8.0e-19 98.2 221 36.2
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 8.0e-19 98.2 235 35.7
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 1.4e-18 97.4 261 33.3
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 1.4e-18 97.4 131 46.6
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.4e-18 97.4 151 44.4
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 1.4e-18 97.4 261 34.1
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.8e-18 97.1 159 42.1
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 2.3e-18 96.7 161 42.9
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 2.3e-18 96.7 280 34.6
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 3.1e-18 96.3 237 37.1
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 3.1e-18 96.3 240 34.2
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 4.0e-18 95.9 152 42.1
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 4.0e-18 95.9 279 34.8
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 4.0e-18 95.9 157 43.3
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 4.0e-18 95.9 267 34.1
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 5.2e-18 95.5 251 33.9
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 5.2e-18 95.5 247 34.8
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 5.2e-18 95.5 133 45.9
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 6.8e-18 95.1 154 42.2
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 6.8e-18 95.1 251 35.5
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 1.2e-17 94.4 159 42.1
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 1.2e-17 94.4 245 35.5
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 1.5e-17 94.0 256 33.2
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 1.5e-17 94.0 257 33.5
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 1.5e-17 94.0 202 36.6
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.0e-17 93.6 133 45.1
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 2.0e-17 93.6 240 34.6
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 3.4e-17 92.8 243 36.6
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 3.4e-17 92.8 256 33.6
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 3.4e-17 92.8 252 31.3
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 4.4e-17 92.4 148 41.2
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 5.8e-17 92.0 252 30.6
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 7.5e-17 91.7 147 42.2
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 7.5e-17 91.7 239 34.7
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.2e-16 90.1 134 46.3
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 2.9e-16 89.7 260 33.5
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 2.9e-16 89.7 161 41.6
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 2.9e-16 89.7 134 44.0
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 3.7e-16 89.4 250 36.0
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 3.7e-16 89.4 142 43.7
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 3.7e-16 89.4 138 45.7
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 4.9e-16 89.0 131 40.5
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 6.4e-16 88.6 142 43.7
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 8.3e-16 88.2 253 33.2
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 1.1e-15 87.8 258 31.0
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 1.1e-15 87.8 236 32.6
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 2.4e-15 86.7 291 33.0
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 3.2e-15 86.3 245 33.9
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 7.0e-15 85.1 267 32.2
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 7.0e-15 85.1 267 30.3
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 9.2e-15 84.7 145 38.6
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 1.2e-14 84.3 255 30.6
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 3.5e-14 82.8 137 40.1
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 6.0e-14 82.0 306 29.7
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.7e-13 80.5 246 31.7
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 5.0e-13 79.0 148 35.1
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 2.5e-12 76.6 263 31.6
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 3.3e-12 76.3 247 32.0
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 9.5e-12 74.7 247 31.6
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 8.1e-11 71.6 135 37.8
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 1.8e-10 70.5 125 39.2
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 3.1e-10 69.7 135 35.6
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 4.4e-09 65.9 48 70.8
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 7.5e-09 65.1 184 32.1
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 1.3e-08 64.3 155 33.5
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 4.9e-08 62.4 50 66.0
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 4.9e-08 62.4 53 58.5
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 6.4e-08 62.0 111 42.3
C04p28750 Brassica napus HOM05D003503 ORTHO05D003885 1.6e-06 57.4 52 53.8
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 2.7e-06 56.6 147 32.7
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 3.5e-06 56.2 169 28.4
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 4.6e-06 55.8 43 65.1


User provided reference genes

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