Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 3.0e-142 508.4 246 100.0
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 5.9e-82 308.1 202 71.3
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 4.8e-76 288.5 198 68.7
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.9e-73 279.3 222 62.6
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.5e-72 276.9 261 57.1
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.9e-72 276.6 248 57.3
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 2.5e-72 276.2 215 61.9
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 7.2e-72 274.6 216 61.1
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.0e-70 270.8 230 59.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.0e-70 270.8 196 63.3
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.3e-68 263.8 231 59.3
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.7e-68 263.5 188 64.4
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.7e-68 263.5 240 57.5
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 2.2e-68 263.1 251 52.2
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 4.9e-68 261.9 212 59.0
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 4.9e-68 261.9 261 54.8
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 8.3e-68 261.2 242 53.3
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.1e-67 260.8 195 61.5
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 2.4e-67 259.6 219 60.7
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 2.4e-67 259.6 225 55.1
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 9.2e-67 257.7 234 57.3
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.2e-66 257.3 228 56.6
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.6e-66 256.9 257 54.5
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 1.6e-66 256.9 247 53.0
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.0e-66 256.5 248 53.6
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.0e-66 256.5 234 56.8
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 2.0e-66 256.5 198 61.6
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 4.5e-66 255.4 233 56.2
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.0e-65 254.2 238 56.7
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.0e-65 254.2 234 54.7
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.3e-65 253.8 247 51.0
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.7e-65 253.4 259 53.3
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 2.3e-65 253.1 200 59.5
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 2.3e-65 253.1 199 61.8
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.3e-65 253.1 233 54.1
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 2.3e-65 253.1 223 55.6
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 6.6e-65 251.5 209 59.3
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 6.6e-65 251.5 218 57.3
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 6.6e-65 251.5 203 59.6
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 6.6e-65 251.5 249 55.4
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 2.5e-64 249.6 247 51.8
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.5e-64 249.6 174 63.8
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 2.5e-64 249.6 235 57.0
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 3.3e-64 249.2 228 55.3
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 4.3e-64 248.8 248 53.2
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.6e-64 248.4 257 53.3
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 9.5e-64 247.7 239 53.6
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 9.5e-64 247.7 217 58.5
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 9.5e-64 247.7 198 56.6
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 1.2e-63 247.3 260 51.2
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 1.2e-63 247.3 250 52.4
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.2e-63 247.3 234 53.4
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 4.7e-63 245.4 214 57.0
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 6.1e-63 245.0 205 57.6
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 8.0e-63 244.6 177 63.3
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.0e-62 244.2 200 57.5
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.4e-62 243.8 242 52.1
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.4e-62 243.8 218 56.0
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.3e-62 243.0 247 51.4
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.2e-61 240.7 236 54.7
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.2e-61 240.7 255 52.2
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.4e-61 239.2 235 51.9
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.4e-61 239.2 212 55.7
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 7.5e-61 238.0 244 53.3
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 7.5e-61 238.0 202 58.9
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.7e-60 236.9 188 59.6
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.2e-60 236.5 249 52.6
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 2.9e-60 236.1 250 53.2
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 2.9e-60 236.1 230 53.0
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 6.4e-60 235.0 244 52.9
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.1e-59 234.2 235 51.5
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 3.2e-59 232.6 170 60.0
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 5.4e-59 231.9 260 50.4
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 9.2e-59 231.1 194 61.9
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 1.6e-58 230.3 194 53.6
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 9.5e-56 221.1 197 56.9
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 8.0e-55 218.0 196 54.6
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.8e-54 216.9 256 48.8
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.5e-53 213.8 195 56.9
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 4.1e-51 205.7 188 52.7
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.2e-50 204.1 245 49.0
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 9.5e-48 194.5 202 47.0
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 6.2e-47 191.8 171 50.9
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 1.5e-45 187.2 143 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 3.4e-45 186.0 185 50.3
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 3.2e-43 179.5 218 43.1
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 3.5e-42 176.0 349 33.2
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.4e-35 152.1 125 60.8
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 2.7e-34 149.8 164 50.6
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.3e-33 147.5 118 58.5
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 7.3e-32 141.7 119 56.3
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 2.6e-29 133.3 209 40.2
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.3e-25 120.2 117 52.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 4.3e-16 89.4 130 44.6
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 3.6e-15 86.3 55 67.3
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.1e-14 84.7 67 55.2
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 5.8e-13 79.0 67 56.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 9.3e-11 71.6 59 57.6
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 1.3e-09 67.8 70 52.9


User provided reference genes

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