Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.0e-205 719.9 384 100.0
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 4.3e-148 528.5 380 75.5
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.5e-145 520.0 377 76.1
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 7.7e-145 517.7 332 82.8
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.9e-144 515.8 380 73.4
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 6.5e-144 514.6 376 75.5
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 5.5e-143 511.5 382 74.3
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 2.1e-142 509.6 382 74.3
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 1.0e-141 507.3 385 72.7
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 6.7e-141 504.6 379 74.1
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.1e-140 503.8 370 77.3
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 2.5e-140 502.7 380 72.9
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 5.7e-140 501.5 383 74.2
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 1.3e-139 500.4 384 71.9
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.2e-139 499.6 356 75.8
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.7e-139 498.8 374 73.5
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 3.7e-139 498.8 380 71.3
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.8e-138 496.5 383 70.2
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.4e-138 496.1 334 79.0
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.4e-138 496.1 387 70.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.4e-138 496.1 383 70.2
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.4e-138 496.1 335 77.9
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 3.1e-138 495.7 325 79.1
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 6.9e-138 494.6 383 69.5
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 6.9e-138 494.6 383 69.5
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 9.1e-138 494.2 340 76.2
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.2e-137 493.8 380 72.1
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.5e-137 493.4 332 78.6
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.5e-137 493.4 332 78.6
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.5e-137 493.4 386 70.5
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.5e-137 493.4 373 72.9
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.5e-137 493.4 343 77.6
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 2.6e-137 492.7 389 72.8
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 3.4e-137 492.3 374 72.2
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 3.4e-137 492.3 374 73.0
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 4.5e-137 491.9 379 71.0
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 4.5e-137 491.9 391 69.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 5.9e-137 491.5 384 69.5
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.0e-136 490.7 336 77.7
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.0e-136 490.7 336 77.7
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.0e-136 490.7 395 69.4
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.0e-136 490.7 384 71.6
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.3e-136 490.3 373 72.7
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.3e-136 490.3 341 76.2
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.7e-136 490.0 387 69.5
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 2.2e-136 489.6 364 72.5
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 2.2e-136 489.6 384 71.4
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 2.9e-136 489.2 336 77.4
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.9e-136 489.2 371 73.9
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 3.8e-136 488.8 378 70.9
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 3.8e-136 488.8 385 69.9
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 6.5e-136 488.0 375 70.9
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 8.5e-136 487.6 334 77.5
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 8.5e-136 487.6 373 71.0
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.1e-135 487.3 337 77.4
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.9e-135 486.5 333 77.8
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 2.5e-135 486.1 366 74.0
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 2.5e-135 486.1 324 79.0
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 3.2e-135 485.7 334 76.9
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 5.5e-135 485.0 339 75.8
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 7.2e-135 484.6 370 73.2
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.6e-134 483.4 375 72.3
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.6e-134 483.4 332 76.5
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 2.1e-134 483.0 387 70.0
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 2.1e-134 483.0 384 70.8
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 2.7e-134 482.6 327 78.3
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 2.7e-134 482.6 413 65.4
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 4.7e-134 481.9 387 66.7
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 4.7e-134 481.9 378 70.1
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.4e-133 480.3 409 67.7
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 3.0e-133 479.2 339 74.6
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 5.1e-133 478.4 389 68.1
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.7e-133 478.0 380 68.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 8.8e-133 477.6 331 77.0
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 2.0e-132 476.5 331 75.5
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 2.0e-132 476.5 362 72.4
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 4.4e-132 475.3 381 71.7
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 7.4e-132 474.6 379 68.3
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.2e-131 473.0 372 70.7
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 4.8e-131 471.9 339 73.5
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 4.8e-131 471.9 365 71.5
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.1e-130 470.7 328 76.8
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 2.4e-130 469.5 330 74.8
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.0e-129 466.5 345 70.7
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 4.5e-129 465.3 346 70.5
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 2.9e-128 462.6 387 67.4
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.5e-127 459.5 341 69.8
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 5.5e-127 458.4 321 76.3
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 9.4e-127 457.6 334 72.2
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.0e-125 454.1 374 68.2
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 1.4e-125 453.8 365 68.8
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.4e-122 443.7 279 83.2
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.4e-122 443.0 334 71.9
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 2.7e-121 439.5 326 73.0
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 4.5e-121 438.7 350 68.9
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 5.9e-121 438.3 288 80.9
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.7e-120 436.8 334 73.1
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 5.0e-120 435.3 286 80.1
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.5e-119 433.7 334 72.8
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.7e-115 420.2 377 64.2
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.8e-115 419.5 331 71.3
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.4e-114 417.2 296 73.6
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.3e-112 410.6 292 71.9
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 5.0e-112 408.7 315 68.6
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.2e-108 397.5 324 66.0
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.2e-102 377.5 354 61.9
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.5e-100 370.5 287 65.5
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 2.6e-100 369.8 235 81.7
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.5e-92 341.7 331 57.1
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 7.5e-92 341.7 275 68.0
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 1.4e-90 337.4 206 83.0
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 8.3e-83 311.6 237 72.2
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 3.5e-81 306.2 240 61.7
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 6.6e-80 302.0 332 52.7
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.6e-78 297.4 254 58.3
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.7e-72 277.3 274 58.4
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 4.3e-71 272.7 214 70.1
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.6e-65 254.2 174 73.0
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 1.3e-59 234.6 203 70.4
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.3e-59 234.6 158 78.5
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.2e-51 207.2 149 70.5
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 5.1e-48 196.1 114 86.8
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 7.4e-47 192.2 142 73.2
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 7.4e-47 192.2 200 58.5
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 2.1e-46 190.7 109 87.2
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 3.7e-46 189.9 134 76.1
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 2.5e-42 177.2 145 70.3
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 4.6e-41 172.9 141 68.8
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 8.2e-38 162.2 114 72.8
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 5.1e-32 142.9 241 37.3
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 6.9e-29 132.5 238 35.3
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 8.5e-27 125.6 189 47.6
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 9.7e-23 112.1 164 39.6
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.8e-21 107.8 143 46.2
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.0e-19 102.1 241 29.5
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.8e-19 100.1 73 71.2
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-18 97.8 50 94.0
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 3.6e-17 93.6 102 55.9
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 5.0e-11 73.2 114 48.2
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.6e-09 68.2 83 51.8


User provided reference genes

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