Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 3.2e-143 511.9 260 100.0
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 3.8e-83 312.4 195 79.5
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 4.9e-83 312.0 235 71.9
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 3.9e-80 302.4 264 64.8
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.5e-79 300.4 264 64.4
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 6.2e-78 295.0 200 72.5
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 1.4e-77 293.9 200 72.0
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 1.4e-77 293.9 245 65.3
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 2.4e-77 293.1 198 75.3
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 9.0e-77 291.2 227 69.2
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 1.2e-76 290.8 257 64.2
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 2.0e-76 290.0 208 73.1
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 2.0e-76 290.0 249 63.1
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 2.6e-76 289.7 250 63.6
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 2.6e-76 289.7 250 63.6
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 3.4e-76 289.3 224 67.4
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 5.8e-76 288.5 197 75.6
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 5.8e-76 288.5 234 67.1
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 5.8e-76 288.5 235 64.3
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 7.6e-76 288.1 251 63.3
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 9.9e-76 287.7 258 65.5
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 9.9e-76 287.7 243 63.8
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 1.7e-75 287.0 245 64.9
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 2.2e-75 286.6 262 59.5
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.9e-75 286.2 251 62.9
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 3.8e-75 285.8 197 75.1
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 3.8e-75 285.8 252 62.3
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 4.9e-75 285.4 189 75.7
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 4.9e-75 285.4 198 75.3
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 6.4e-75 285.0 250 62.8
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 6.4e-75 285.0 252 63.1
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 6.4e-75 285.0 246 62.2
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 6.4e-75 285.0 251 62.5
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 8.4e-75 284.6 257 62.3
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 8.4e-75 284.6 245 62.9
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 8.4e-75 284.6 251 64.1
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 1.4e-74 283.9 238 65.1
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 1.9e-74 283.5 194 73.2
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 1.9e-74 283.5 232 65.1
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 1.9e-74 283.5 195 73.3
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 2.4e-74 283.1 236 64.4
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 2.4e-74 283.1 253 62.1
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 3.2e-74 282.7 194 73.2
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 3.2e-74 282.7 247 64.0
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 4.2e-74 282.3 252 62.7
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 4.2e-74 282.3 252 62.7
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 5.5e-74 282.0 238 64.3
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 5.5e-74 282.0 216 67.6
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 5.5e-74 282.0 255 62.0
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 9.3e-74 281.2 214 67.8
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 9.3e-74 281.2 214 67.8
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 9.3e-74 281.2 223 68.6
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 1.2e-73 280.8 257 61.9
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 1.2e-73 280.8 222 68.5
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.2e-73 280.8 247 62.3
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 1.6e-73 280.4 249 62.2
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 3.5e-73 279.3 198 73.2
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 4.6e-73 278.9 254 63.8
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 1.3e-72 277.3 255 60.8
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 2.3e-72 276.6 245 61.2
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 3.0e-72 276.2 266 59.4
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 3.9e-72 275.8 245 60.8
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 8.7e-72 274.6 198 69.7
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 1.1e-71 274.2 222 65.8
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 1.9e-71 273.5 252 62.7
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 2.5e-71 273.1 204 70.1
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.6e-71 271.9 244 59.4
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.6e-71 271.9 244 59.4
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 5.6e-71 271.9 263 58.6
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 7.4e-71 271.6 254 59.8
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 2.8e-70 269.6 224 66.5
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 2.8e-70 269.6 255 60.8
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 2.8e-70 269.6 217 66.8
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 6.2e-70 268.5 223 65.9
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 8.1e-70 268.1 212 67.5
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 8.1e-70 268.1 261 56.3
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 8.1e-70 268.1 234 63.7
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 8.1e-70 268.1 234 63.7
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 1.1e-69 267.7 253 60.9
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.4e-69 267.3 223 65.9
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 1.4e-69 267.3 262 58.4
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 1.8e-69 266.9 263 60.1
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 1.8e-69 266.9 245 58.8
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 4.0e-69 265.8 261 57.9
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 6.9e-69 265.0 248 59.3
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 1.2e-68 264.2 255 59.6
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.2e-68 264.2 267 58.1
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.5e-68 263.8 222 65.3
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 2.0e-68 263.5 244 61.5
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 3.4e-68 262.7 223 65.0
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 4.5e-68 262.3 231 63.2
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 7.6e-68 261.5 249 59.4
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 1.3e-67 260.8 253 56.5
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 8.4e-67 258.1 180 72.8
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 5.5e-66 255.4 202 63.4
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 5.5e-66 255.4 217 64.1
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 2.7e-65 253.1 224 59.4
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 1.3e-64 250.8 176 72.2
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 2.3e-64 250.0 243 58.0
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 3.0e-64 249.6 247 57.1
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 1.5e-63 247.3 224 59.8
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 3.3e-63 246.1 235 59.6
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 5.7e-63 245.4 261 54.8
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 2.1e-62 243.4 176 67.0
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 2.2e-59 233.4 157 74.5
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.6e-54 217.2 147 72.1
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 1.6e-54 217.2 181 59.7
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 6.3e-54 215.3 202 59.4
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 1.8e-53 213.8 177 59.9
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 3.4e-52 209.5 263 51.3
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 1.3e-46 191.0 182 59.9
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 3.1e-29 133.3 111 62.2
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 5.0e-27 125.9 65 98.5
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 2.0e-23 114.0 99 60.6
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 1.7e-22 110.9 129 51.2
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 1.1e-21 108.2 71 71.8
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 3.6e-17 93.2 108 49.1
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-16 91.7 140 37.1
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 8.8e-16 88.6 121 45.5
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.8e-09 67.0 92 46.7
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 1.0e-08 65.1 65 53.8
CDE05G2085 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 5.2e-08 62.8 36 88.9
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 4.4e-07 59.7 69 50.7


User provided reference genes

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