Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 2.4e-101 372.1 177 100.0
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.2e-90 335.1 183 90.7
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 1.7e-75 286.2 178 79.2
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 2.9e-70 268.9 178 72.5
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 7.0e-69 264.2 174 73.0
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.7e-68 262.3 181 72.4
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.7e-68 262.3 181 72.4
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 6.0e-68 261.2 181 71.8
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 6.0e-68 261.2 181 71.8
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 1.3e-67 260.0 181 71.3
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 1.7e-67 259.6 180 71.1
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 3.0e-67 258.8 182 70.9
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 3.9e-67 258.5 176 72.2
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 3.9e-67 258.5 185 69.2
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 8.6e-67 257.3 178 70.8
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 1.5e-66 256.5 244 57.8
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 2.5e-66 255.8 184 71.7
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 7.3e-66 254.2 183 66.1
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 2.8e-65 252.3 176 68.8
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 4.7e-65 251.5 179 69.3
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 6.2e-65 251.1 177 69.5
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 1.1e-64 250.4 176 69.3
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 2.3e-64 249.2 178 70.2
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 2.3e-64 249.2 185 67.0
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 4.0e-64 248.4 176 69.9
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 5.2e-64 248.1 180 70.0
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 1.5e-63 246.5 183 67.2
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 2.0e-63 246.1 179 68.2
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 2.0e-63 246.1 181 70.7
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 2.6e-63 245.7 184 69.0
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.2e-62 242.7 179 67.0
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.2e-62 242.7 179 67.0
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 2.9e-62 242.3 183 66.1
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.1e-61 240.4 179 66.5
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 1.1e-61 240.4 179 66.5
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 3.2e-61 238.8 179 65.9
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 5.4e-61 238.0 182 67.0
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 5.4e-61 238.0 180 67.8
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 7.1e-61 237.7 178 66.9
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 7.1e-61 237.7 201 63.2
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 9.2e-61 237.3 195 63.6
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 1.6e-60 236.5 180 65.0
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 3.5e-60 235.3 180 64.4
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 4.6e-60 235.0 181 64.6
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 4.6e-60 235.0 182 65.4
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 4.6e-60 235.0 179 64.2
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 6.0e-60 234.6 181 65.7
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 1.0e-59 233.8 181 65.2
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 1.3e-59 233.4 175 67.4
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 2.3e-59 232.6 181 65.7
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 2.3e-59 232.6 184 65.2
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 2.3e-59 232.6 180 67.8
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 3.0e-59 232.3 189 63.5
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 3.0e-59 232.3 181 65.7
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 3.9e-59 231.9 180 63.9
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 6.6e-59 231.1 176 64.8
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 8.6e-59 230.7 178 63.5
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 8.6e-59 230.7 179 64.2
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 1.1e-58 230.3 181 64.6
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 1.5e-58 229.9 178 64.0
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 2.5e-58 229.2 174 66.1
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 3.3e-58 228.8 177 64.4
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 4.3e-58 228.4 178 64.6
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 1.6e-57 226.5 175 65.7
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 4.7e-57 224.9 167 68.3
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 8.1e-57 224.2 178 64.6
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 8.1e-57 224.2 178 64.6
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 1.8e-56 223.0 178 62.9
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 1.8e-56 223.0 178 62.9
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 2.3e-56 222.6 176 64.2
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 3.1e-56 222.2 168 66.7
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 4.0e-56 221.9 179 64.2
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 5.2e-56 221.5 172 65.7
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 5.2e-56 221.5 177 63.3
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 1.2e-55 220.3 176 64.2
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 1.5e-55 219.9 178 62.9
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 2.6e-55 219.2 193 60.1
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 2.2e-54 216.1 147 72.8
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 8.3e-54 214.2 157 68.8
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 2.4e-53 212.6 151 70.2
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 3.5e-52 208.8 146 71.2
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 3.5e-52 208.8 218 53.2
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 3.5e-52 208.8 171 62.0
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.5e-50 202.6 197 56.3
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.1e-48 197.2 141 70.2
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 1.1e-48 197.2 178 58.4
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.5e-47 193.4 104 89.4
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 2.6e-47 192.6 190 54.7
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 1.4e-45 186.8 104 85.6
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 1.9e-45 186.4 160 65.0
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 7.1e-45 184.5 101 88.1
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 1.7e-43 179.9 134 70.1
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 3.0e-43 179.1 111 81.1
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 4.4e-39 165.2 178 53.9
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 5.8e-39 164.9 181 50.8
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 1.0e-35 154.1 132 58.3
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 3.9e-35 152.1 110 67.3
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 9.0e-32 141.0 128 57.0
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 1.0e-27 127.5 123 57.7
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 9.6e-18 94.4 97 55.7
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 1.3e-17 94.0 60 75.0
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 1.2e-12 77.4 47 80.9
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 3.0e-11 72.8 48 72.9
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 9.7e-10 67.8 65 49.2
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 3.7e-09 65.9 48 70.8
Potri.007G083100 Populus trichocarpa HOM05D007255 ORTHO05D009052 6.9e-08 61.6 35 77.1
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 1.5e-07 60.5 36 72.2


User provided reference genes

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