Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 1.6e-97 359.4 178 100.0
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 1.8e-80 302.8 195 83.1
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 4.4e-63 245.0 190 64.7
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 6.4e-62 241.1 189 64.0
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 7.1e-61 237.7 189 64.0
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 7.1e-61 237.7 189 64.6
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 3.9e-59 231.9 194 60.3
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 5.1e-59 231.5 189 63.0
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 6.6e-59 231.1 194 60.3
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 8.7e-59 230.7 189 63.0
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 5.6e-58 228.0 189 60.8
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 5.6e-58 228.0 189 61.9
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 9.6e-58 227.3 189 61.4
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.3e-57 226.9 189 61.9
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.6e-57 226.5 190 61.6
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 1.6e-57 226.5 188 60.6
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 2.1e-57 226.1 188 61.7
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 2.8e-57 225.7 190 60.5
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 2.8e-57 225.7 188 62.2
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 4.8e-57 224.9 188 62.2
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 6.2e-57 224.6 189 60.8
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 6.2e-57 224.6 187 62.0
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 1.1e-56 223.8 189 59.8
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 1.4e-56 223.4 189 59.8
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 1.4e-56 223.4 189 61.4
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.8e-56 223.0 189 60.8
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 1.8e-56 223.0 189 60.8
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 1.8e-56 223.0 189 62.4
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 1.8e-56 223.0 189 62.4
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 1.8e-56 223.0 186 60.8
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 2.4e-56 222.6 191 60.2
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 3.1e-56 222.2 189 61.4
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 3.1e-56 222.2 190 60.5
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 3.1e-56 222.2 188 62.2
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 4.0e-56 221.9 188 61.2
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 4.0e-56 221.9 190 60.0
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 5.3e-56 221.5 190 60.0
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 6.9e-56 221.1 189 58.7
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 6.9e-56 221.1 189 59.3
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 6.9e-56 221.1 189 61.4
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 2.0e-55 219.5 188 60.1
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 2.0e-55 219.5 188 60.1
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 2.0e-55 219.5 188 60.1
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 2.0e-55 219.5 188 60.1
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 2.0e-55 219.5 189 59.8
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 2.0e-55 219.5 188 59.6
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 2.0e-55 219.5 189 60.3
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 2.6e-55 219.2 190 61.6
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 2.6e-55 219.2 188 59.6
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 2.6e-55 219.2 186 59.7
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 4.5e-55 218.4 188 58.5
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 4.5e-55 218.4 188 59.6
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 5.8e-55 218.0 188 59.0
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 5.8e-55 218.0 189 59.3
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 7.6e-55 217.6 189 60.3
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 2.2e-54 216.1 187 59.9
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 2.9e-54 215.7 186 60.2
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 2.9e-54 215.7 189 57.1
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 3.8e-54 215.3 188 58.5
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 4.9e-54 214.9 188 60.1
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 6.4e-54 214.5 197 57.9
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 1.1e-53 213.8 191 58.1
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 1.9e-53 213.0 189 58.2
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 1.9e-53 213.0 186 59.7
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 1.9e-53 213.0 188 58.0
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 2.4e-53 212.6 189 59.8
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 3.2e-53 212.2 189 56.6
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 4.2e-53 211.8 189 59.3
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 4.2e-53 211.8 189 59.3
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 4.2e-53 211.8 186 58.6
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 5.4e-53 211.5 189 59.3
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 7.1e-53 211.1 175 61.7
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 9.3e-53 210.7 189 59.3
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 2.7e-52 209.1 189 57.1
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 6.0e-52 208.0 188 56.4
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 1.0e-51 207.2 188 55.9
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 1.8e-51 206.5 189 57.7
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 3.0e-51 205.7 162 67.3
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 3.0e-51 205.7 207 51.7
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 3.3e-50 202.2 219 52.1
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 9.6e-50 200.7 189 56.1
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 1.8e-48 196.4 234 47.4
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 3.4e-47 192.2 192 54.7
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 7.6e-47 191.0 162 61.7
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 5.1e-43 178.3 152 57.9
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 1.6e-41 173.3 208 47.6
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 2.8e-41 172.6 187 52.4
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 2.8e-41 172.6 187 52.4
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 6.2e-41 171.4 188 48.9
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 1.1e-40 170.6 189 48.7
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 9.0e-40 167.5 187 49.7
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 1.2e-39 167.2 187 48.1
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 1.2e-39 167.2 190 46.8
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 3.4e-39 165.6 191 47.6
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.0e-38 164.1 188 47.9
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 2.2e-38 162.9 143 59.4
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 9.3e-37 157.5 191 49.7
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 6.0e-36 154.8 216 42.1
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 7.9e-36 154.5 131 60.3
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 7.9e-36 154.5 109 64.2
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 3.9e-35 152.1 236 42.8
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 1.1e-34 150.6 183 48.6
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 1.4e-32 143.7 160 45.0
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 2.9e-30 136.0 172 47.7
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 5.5e-29 131.7 110 59.1
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 1.2e-28 130.6 120 56.7
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 2.2e-22 109.8 112 54.5
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 9.1e-16 87.8 105 42.9
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 2.6e-15 86.3 86 55.8
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 7.2e-13 78.2 97 49.5
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 3.0e-11 72.8 76 53.9
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 3.9e-11 72.4 63 58.7
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 1.1e-10 70.9 47 63.8
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 2.2e-09 66.6 64 51.6


User provided reference genes

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