Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy237s005 Aquilegia oxysepala HOM05D001221 ORTHO05D009285 9.5e-55 216.5 100 100.0
Aqoxy2G03089 Aquilegia oxysepala HOM05D001221 ORTHO05D009285 1.9e-26 122.5 76 77.6
Actinidia29122 Actinidia chinensis HOM05D001221 ORTHO05D009285 1.9e-15 85.9 77 57.1
TAR369G0855 Trochodendron aralioides HOM05D001221 ORTHO05D009285 1.9e-15 85.9 75 53.3
CSS0000018 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 3.7e-14 81.6 78 47.4
CSS0034566 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 3.7e-14 81.6 78 47.4
CiPaw.09G207400 Carya illinoinensis HOM05D001221 ORTHO05D009285 8.1e-14 80.5 73 49.3
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 1.8e-13 79.3 64 59.4
DCAR_028823 Daucus carota HOM05D001221 ORTHO05D009285 4.0e-13 78.2 73 49.3
TWI60G0701 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 9.0e-13 77.0 72 51.4
MD04G1148400 Malus domestica HOM05D001221 ORTHO05D009285 1.2e-12 76.6 81 48.1
TWI34G0521 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 1.2e-12 76.6 72 50.0
Manes.09G103400 Manihot esculenta HOM05D001221 ORTHO05D009285 1.5e-12 76.3 77 46.8
Sopen09g007240 Solanum pennellii HOM05D001221 ORTHO05D009285 1.5e-12 76.3 59 55.9
Lsat_1_v5_gn_9_35920 Lactuca sativa HOM05D001221 ORTHO05D009285 2.6e-12 75.5 75 48.0
Lj2C77T2 Lonicera japonica HOM05D001221 ORTHO05D009285 2.6e-12 75.5 78 48.7
MD12G1162000 Malus domestica HOM05D001221 ORTHO05D009285 2.6e-12 75.5 82 46.3
VMungo1215G0061 Vigna mungo HOM05D001221 ORTHO05D009285 2.6e-12 75.5 66 56.1
MSTRG.19022 Avicennia marina HOM05D001221 ORTHO05D009285 3.4e-12 75.1 75 52.0
Cfa010721 Carpinus fangiana HOM05D001221 ORTHO05D009285 4.5e-12 74.7 78 50.0
PSO384G2279 Papaver somniferum HOM05D001221 ORTHO05D009285 4.5e-12 74.7 67 58.2
Rhsim05G0207300 Rhododendron simsii HOM05D001221 ORTHO05D009285 4.5e-12 74.7 79 49.4
VMungo1080G1832 Vigna mungo HOM05D001221 ORTHO05D009285 4.5e-12 74.7 52 65.4
Haze_03252 Corylus avellana HOM05D001221 ORTHO05D009285 5.8e-12 74.3 78 48.7
Phvul.002G155200 Phaseolus vulgaris HOM05D001221 ORTHO05D009285 5.8e-12 74.3 61 59.0
ECA247G4014 Erigeron canadensis HOM05D001221 ORTHO05D009285 7.6e-12 73.9 75 50.7
PGSC0003DMG400008495 Solanum tuberosum HOM05D001221 ORTHO05D009285 7.6e-12 73.9 59 54.2
Nn2g14026 Nelumbo nucifera HOM05D001221 ORTHO05D009285 1.0e-11 73.6 75 45.3
Migut.J00190 Erythranthe guttata HOM05D001221 ORTHO05D009285 1.7e-11 72.8 73 47.9
PGR042G0922 Punica granatum HOM05D001221 ORTHO05D009285 1.7e-11 72.8 74 50.0
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 1.7e-11 72.8 75 53.3
ATR0618G243 Amborella trichopoda HOM05D001221 ORTHO05D009285 2.2e-11 72.4 61 54.1
RcHm_v2.0_Chr3g0463601 Rosa chinensis HOM05D001221 ORTHO05D009285 2.2e-11 72.4 78 44.9
Glyma.08G119100 Glycine max HOM05D001221 ORTHO05D009285 2.9e-11 72.0 72 47.2
Hma1.2p1_0244F.1_g101310 Hydrangea macrophylla HOM05D001221 ORTHO05D009285 6.5e-11 70.9 71 46.5
FAN02G1926 Fragaria x ananassa HOM05D001221 ORTHO05D009285 1.4e-10 69.7 77 44.2
FAN05G4573 Fragaria x ananassa HOM05D001221 ORTHO05D009285 1.4e-10 69.7 77 44.2
Psat3g083200 Pisum sativum HOM05D001221 ORTHO05D009285 1.4e-10 69.7 78 46.2
Prupe.6G272700 Prunus persica HOM05D001221 ORTHO05D009285 1.4e-10 69.7 82 45.1
Ca_08338_v3 Cicer arietinum L. HOM05D001221 ORTHO05D009285 2.5e-10 68.9 76 46.1
CAN.G703.5 Capsicum annuum HOM05D001221 ORTHO05D009285 3.2e-10 68.6 64 46.9
FvH4_6g11860 Fragaria vesca HOM05D001221 ORTHO05D009285 3.2e-10 68.6 77 44.2
FAN14G0895 Fragaria x ananassa HOM05D001221 ORTHO05D009285 3.2e-10 68.6 77 44.2
FAN14G4172 Fragaria x ananassa HOM05D001221 ORTHO05D009285 3.2e-10 68.6 77 44.2
FAN14G5805 Fragaria x ananassa HOM05D001221 ORTHO05D009285 3.2e-10 68.6 77 44.2
Oeu030516.1 Olea europaea HOM05D001221 ORTHO05D009285 3.2e-10 68.6 57 56.1
CDE04G2724 Ceratophyllum demersum HOM05D001986 ORTHO05D009285 4.2e-10 68.2 71 45.1
Sabra16G0108600 Salix brachista HOM05D001221 ORTHO05D009285 5.5e-10 67.8 79 44.3
Potri.016G112900 Populus trichocarpa HOM05D001221 ORTHO05D009285 7.1e-10 67.4 71 43.7
Lalb_Chr07g0193891 Lupinus albus HOM05D001221 ORTHO05D009285 9.3e-10 67.0 76 48.7
Thecc.10G136500 Theobroma cacao HOM05D001221 ORTHO05D009285 9.3e-10 67.0 74 43.2
TPR.G23659 Trifolium pratense HOM05D001221 ORTHO05D009285 1.2e-09 66.6 68 47.1
Nitab4.5_0000008g0890 Nicotiana tabacum HOM05D001221 ORTHO05D009285 1.6e-09 66.2 60 51.7
Nitab4.5_0011703g0010 Nicotiana tabacum HOM05D001221 ORTHO05D009285 1.6e-09 66.2 60 51.7
Actinidia13771 Actinidia chinensis HOM05D001221 ORTHO05D009285 2.1e-09 65.9 50 54.0
HPP92_012633 Vanilla planifolia HOM05D001221 ORTHO05D009285 2.1e-09 65.9 74 44.6
Atru.chr8.2211 Acer truncatum HOM05D001221 ORTHO05D009285 2.7e-09 65.5 75 41.3
Medtr7g088170 Medicago truncatula HOM05D001221 ORTHO05D009285 2.7e-09 65.5 68 47.1
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 6.0e-09 64.3 90 41.1
Sed0009696 Sechium edule HOM05D001221 ORTHO05D009285 7.9e-09 63.9 74 47.3
Ciclev10011651m.g Citrus clementina HOM05D001221 ORTHO05D009285 1.0e-08 63.5 54 51.9
Cc00_g18180 Coffea canephora HOM05D001221 ORTHO05D009285 1.8e-08 62.8 56 58.9
CsaV3_4G026220 Cucumis sativus L. HOM05D001221 ORTHO05D009285 2.3e-08 62.4 54 55.6
SHI12823 Sapria himalayana HOM05D001221 ORTHO05D009285 3.0e-08 62.0 72 44.4
Lj3g0014679 Lotus japonicus HOM05D001221 ORTHO05D009285 8.7e-08 60.5 71 43.7
Gohir.D06G183400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 1.9e-07 59.3 72 40.3
Gorai.010G214400 Gossypium raimondii HOM05D001221 ORTHO05D009285 1.9e-07 59.3 72 40.3
unitig_27.g24844 Utricularia gibba HOM05D001221 ORTHO05D009285 1.9e-07 59.3 76 47.4
Gohir.A06G173400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 2.5e-07 58.9 72 40.3
AUR62032469 Chenopodium quinoa HOM05D001221 ORTHO05D009285 3.3e-07 58.5 54 51.9
COL.COLO4_02741 Corchorus olitorius HOM05D001221 ORTHO05D009285 4.3e-07 58.2 61 42.6
MELO3C003302.2 Cucumis melo HOM05D001221 ORTHO05D009285 4.3e-07 58.2 78 42.3
Cpa.g.sc106.33 Carica papaya HOM05D001221 ORTHO05D009285 5.7e-07 57.8 44 52.3
Os03g0264700 Oryza sativa ssp. japonica HOM05D001221 ORTHO05D009285 4.8e-06 54.7 52 48.1
THA.LOC104816213 Tarenaya hassleriana HOM05D001221 ORTHO05D009285 4.8e-06 54.7 89 32.6
AUR62041939 Chenopodium quinoa HOM05D001221 ORTHO05D009285 6.2e-06 54.3 54 50.0


User provided reference genes

Program Settings